RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 CTGFP29279 349 aa17.8■□□□□ 0.44
CCS-206ENST00000530961 PPP2R5BQ15173 497 aa17.8■□□□□ 0.44
CCS-206ENST00000530961 APOA5Q6Q788 366 aa17.8■□□□□ 0.44
CCS-206ENST00000530961 OTOP1Q7RTM1 612 aa17.8■□□□□ 0.44
CCS-206ENST00000530961 CPXCR1Q8N123 301 aa17.8■□□□□ 0.44
CCS-206ENST00000530961 STAG2Q8N3U4 1231 aa17.8■□□□□ 0.44
CCS-206ENST00000530961 FANCBQ8NB91 859 aa17.8■□□□□ 0.44
CCS-206ENST00000530961 BRF1Q92994 677 aa17.8■□□□□ 0.44
CCS-206ENST00000530961 UBA5Q9GZZ9 404 aa17.8■□□□□ 0.44
CCS-206ENST00000530961 ALDH8A1Q9H2A2 487 aaPredicted RBP17.8■□□□□ 0.44
CCS-206ENST00000530961 CWC22Q9HCG8 908 aaKnown RBP17.8■□□□□ 0.44
CCS-206ENST00000530961 BRPF3Q9ULD4 1205 aa17.8■□□□□ 0.44
CCS-206ENST00000530961 LOC285556D6RIA3 1793 aa17.8■□□□□ 0.44
CCS-206ENST00000530961 RBBP6Q7Z6E9 1792 aaKnown RBP17.8■□□□□ 0.44
CCS-206ENST00000530961 KIAA0100Q14667 2235 aaKnown RBP17.8■□□□□ 0.44
CCS-206ENST00000530961 LAMA4Q16363 1823 aa17.79■□□□□ 0.44
CCS-206ENST00000530961 KLF18A0A0U1RQI7 1052 aa17.79■□□□□ 0.44
CCS-206ENST00000530961 ZBTB43O43298 467 aa17.79■□□□□ 0.44
CCS-206ENST00000530961 STRNO43815 780 aa17.79■□□□□ 0.44
CCS-206ENST00000530961 ERCC3P19447 782 aa17.79■□□□□ 0.44
CCS-206ENST00000530961 EVCP57679 992 aa17.79■□□□□ 0.44
CCS-206ENST00000530961 GPR142Q7Z601 462 aa17.79■□□□□ 0.44
CCS-206ENST00000530961 PLEKHH3Q7Z736 793 aa17.79■□□□□ 0.44
CCS-206ENST00000530961 NCAPG2Q86XI2 1143 aa17.79■□□□□ 0.44
CCS-206ENST00000530961 ADGRF4Q8IZF3 695 aa17.79■□□□□ 0.44
CCS-206ENST00000530961 MYL10Q9BUA6 226 aa17.79■□□□□ 0.44
CCS-206ENST00000530961 TMEM106CQ9BVX2 250 aa17.79■□□□□ 0.44
CCS-206ENST00000530961 COL25A1Q9BXS0 654 aaPredicted RBP17.79■□□□□ 0.44
CCS-206ENST00000530961 RAVER2Q9HCJ3 691 aaKnown RBP17.79■□□□□ 0.44
CCS-206ENST00000530961 SRRDQ9UH36 339 aa17.79■□□□□ 0.44
CCS-206ENST00000530961 DHX16O60231 1041 aaKnown RBP17.78■□□□□ 0.44
CCS-206ENST00000530961 ICAM1P05362 532 aa17.78■□□□□ 0.44
CCS-206ENST00000530961 CAP1Q01518 475 aa17.78■□□□□ 0.44
CCS-206ENST00000530961 ANKRD1Q15327 319 aa17.78■□□□□ 0.44
CCS-206ENST00000530961 TKFCQ3LXA3 575 aa17.78■□□□□ 0.44
CCS-206ENST00000530961 SNRNP48Q6IEG0 339 aaKnown RBP17.78■□□□□ 0.44
CCS-206ENST00000530961 MICU3Q86XE3 530 aa17.78■□□□□ 0.44
CCS-206ENST00000530961 IL27Q8NEV9 243 aa17.78■□□□□ 0.44
CCS-206ENST00000530961 SOCS4Q8WXH5 440 aa17.78■□□□□ 0.44
CCS-206ENST00000530961 RIOX1Q9H6W3 641 aa17.78■□□□□ 0.44
CCS-206ENST00000530961 JMJD4Q9H9V9 463 aa17.78■□□□□ 0.44
CCS-206ENST00000530961 RBM28Q9NW13 759 aaKnown RBP17.78■□□□□ 0.44
CCS-206ENST00000530961 IVNS1ABPQ9Y6Y0 642 aa17.78■□□□□ 0.44
CCS-206ENST00000530961 ZNF536O15090 1300 aa17.77■□□□□ 0.44
CCS-206ENST00000530961 CCDC196A0A1B0GTZ2 297 aa17.77■□□□□ 0.44
CCS-206ENST00000530961 PTPREP23469 700 aa17.77■□□□□ 0.44
CCS-206ENST00000530961 APOBRQ0VD83 1088 aa17.77■□□□□ 0.44
CCS-206ENST00000530961 WDR78Q5VTH9 848 aa17.77■□□□□ 0.44
CCS-206ENST00000530961 CCDC174Q6PII3 467 aa17.77■□□□□ 0.44
CCS-206ENST00000530961 ABRAQ8N0Z2 381 aa17.77■□□□□ 0.44
CCS-206ENST00000530961 CHST13Q8NET6 341 aa17.77■□□□□ 0.44
CCS-206ENST00000530961 CPVLQ9H3G5 476 aa17.77■□□□□ 0.44
CCS-206ENST00000530961 VAT1LQ9HCJ6 419 aa17.77■□□□□ 0.44
CCS-206ENST00000530961 FBXO40Q9UH90 709 aa17.77■□□□□ 0.44
CCS-206ENST00000530961 GJD2Q9UKL4 321 aa17.77■□□□□ 0.44
CCS-206ENST00000530961 SLC15A5A6NIM6 579 aa17.76■□□□□ 0.43
CCS-206ENST00000530961 ECM2O94769 699 aaPredicted RBP17.76■□□□□ 0.43
CCS-206ENST00000530961 RXRAP19793 462 aa17.76■□□□□ 0.43
CCS-206ENST00000530961 NEK4P51957 841 aa17.76■□□□□ 0.43
CCS-206ENST00000530961 SNAP25P60880 206 aa17.76■□□□□ 0.43
CCS-206ENST00000530961 TRAF1Q13077 416 aa17.76■□□□□ 0.43
CCS-206ENST00000530961 TOB2Q14106 344 aaPredicted RBP17.76■□□□□ 0.43
CCS-206ENST00000530961 RTN1Q16799 776 aa17.76■□□□□ 0.43
CCS-206ENST00000530961 MTMR8Q96EF0 704 aa17.76■□□□□ 0.43
CCS-206ENST00000530961 ZNF274Q96GC6 653 aaPredicted RBP17.76■□□□□ 0.43
CCS-206ENST00000530961 AGBL1Q96MI9 1066 aa17.76■□□□□ 0.43
CCS-206ENST00000530961 NUDT12Q9BQG2 462 aa17.76■□□□□ 0.43
CCS-206ENST00000530961 SPZ1Q9BXG8 430 aa17.76■□□□□ 0.43
CCS-206ENST00000530961 CCPG1Q9ULG6 757 aa17.76■□□□□ 0.43
CCS-206ENST00000530961 NAP1L2Q9ULW6 460 aaPredicted RBP17.76■□□□□ 0.43
CCS-206ENST00000530961 PTPN22Q9Y2R2 807 aa17.76■□□□□ 0.43
CCS-206ENST00000530961 RIPK3Q9Y572 518 aa17.76■□□□□ 0.43
CCS-206ENST00000530961 RANBP2P49792 3224 aaKnown RBP17.75■□□□□ 0.43
CCS-206ENST00000530961 GOLGA8AA7E2F4 631 aa17.75■□□□□ 0.43
CCS-206ENST00000530961 GOLGA8BA8MQT2 603 aa17.75■□□□□ 0.43
CCS-206ENST00000530961 FCER1AP12319 257 aa17.75■□□□□ 0.43
CCS-206ENST00000530961 FLT3LGP49771 235 aa17.75■□□□□ 0.43
CCS-206ENST00000530961 METAP2P50579 478 aaKnown RBP eCLIP17.75■□□□□ 0.43
CCS-206ENST00000530961 PRKCZQ05513 592 aa17.75■□□□□ 0.43
CCS-206ENST00000530961 CDC37Q16543 378 aaPredicted RBP17.75■□□□□ 0.43
CCS-206ENST00000530961 MORN1Q5T089 497 aa17.75■□□□□ 0.43
CCS-206ENST00000530961 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.75■□□□□ 0.435e-6■■■■■ 45.5
CCS-206ENST00000530961 CCDC144CPQ8IYA2 1237 aa17.75■□□□□ 0.43
CCS-206ENST00000530961 HTTP42858 3142 aa17.75■□□□□ 0.43
CCS-206ENST00000530961 ZBTB5O15062 677 aa17.74■□□□□ 0.43
CCS-206ENST00000530961 CYTH3O43739 400 aa17.74■□□□□ 0.43
CCS-206ENST00000530961 PDIA3P30101 505 aaKnown RBP17.74■□□□□ 0.43
CCS-206ENST00000530961 SLC4A3P48751 1232 aa17.74■□□□□ 0.43
CCS-206ENST00000530961 IRF5Q13568 498 aa17.74■□□□□ 0.43
CCS-206ENST00000530961 GRB14Q14449 540 aa17.74■□□□□ 0.43
CCS-206ENST00000530961 KCTD2Q14681 263 aa17.74■□□□□ 0.43
CCS-206ENST00000530961 TMTC3Q6ZXV5 915 aa17.74■□□□□ 0.43
CCS-206ENST00000530961 NBPF11Q86T75 865 aa17.74■□□□□ 0.43
CCS-206ENST00000530961 RAB11FIP4Q86YS3 637 aa17.74■□□□□ 0.43
CCS-206ENST00000530961 SRBD1Q8N5C6 995 aaKnown RBP17.74■□□□□ 0.43
CCS-206ENST00000530961 RAET1EQ8TD07 263 aa17.74■□□□□ 0.43
CCS-206ENST00000530961 TBC1D32Q96NH3 1257 aa17.74■□□□□ 0.43
CCS-206ENST00000530961 TRERF1Q96PN7 1200 aa17.74■□□□□ 0.43
CCS-206ENST00000530961 KIF2CQ99661 725 aa17.74■□□□□ 0.43
CCS-206ENST00000530961 SLC5A4Q9NY91 659 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms