RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 ERVK-7P63135 1459 aa9.32□□□□□ -0.92
CTNND1-227ENST00000530748 SORBS3O60504 671 aa9.32□□□□□ -0.92
CTNND1-227ENST00000530748 ABCB5Q2M3G0 1257 aa9.32□□□□□ -0.92
CTNND1-227ENST00000530748 TRIM50Q86XT4 487 aa9.32□□□□□ -0.92
CTNND1-227ENST00000530748 PALM2Q8IXS6 379 aa9.32□□□□□ -0.92
CTNND1-227ENST00000530748 RUNDC3BQ96NL0 473 aa9.32□□□□□ -0.92
CTNND1-227ENST00000530748 KRT12Q99456 494 aa9.32□□□□□ -0.92
CTNND1-227ENST00000530748 NLRC4Q9NPP4 1024 aa9.32□□□□□ -0.92
CTNND1-227ENST00000530748 YEATS2Q9ULM3 1422 aa9.32□□□□□ -0.92
CTNND1-227ENST00000530748 PPFIA1Q13136 1202 aa9.32□□□□□ -0.92
CTNND1-227ENST00000530748 PPP2R5DQ14738 602 aa9.32□□□□□ -0.92
CTNND1-227ENST00000530748 ASPRV1Q53RT3 343 aa9.32□□□□□ -0.92
CTNND1-227ENST00000530748 GPIHBP1Q8IV16 184 aa9.32□□□□□ -0.92
CTNND1-227ENST00000530748 RPUSD2Q8IZ73 545 aaKnown RBP9.32□□□□□ -0.92
CTNND1-227ENST00000530748 MIS12Q9H081 205 aa9.32□□□□□ -0.92
CTNND1-227ENST00000530748 NRBP2Q9NSY0 501 aa9.32□□□□□ -0.92
CTNND1-227ENST00000530748 LEMD3Q9Y2U8 911 aa9.32□□□□□ -0.92
CTNND1-227ENST00000530748 CLIC4Q9Y696 253 aa9.32□□□□□ -0.92
CTNND1-227ENST00000530748 PPP6R2O75170 966 aa9.32□□□□□ -0.92
CTNND1-227ENST00000530748 KRT15P19012 456 aa9.32□□□□□ -0.92
CTNND1-227ENST00000530748 SCRN1Q12765 414 aa9.32□□□□□ -0.92
CTNND1-227ENST00000530748 MCUR1Q96AQ8 359 aa9.32□□□□□ -0.92
CTNND1-227ENST00000530748 HAUS1Q96CS2 278 aa9.32□□□□□ -0.92
CTNND1-227ENST00000530748 GREM2Q9H772 168 aa9.32□□□□□ -0.92
CTNND1-227ENST00000530748 COL4A3BPQ9Y5P4 624 aa9.32□□□□□ -0.92
CTNND1-227ENST00000530748 GOLGA8HP0CJ92 632 aa9.31□□□□□ -0.92
CTNND1-227ENST00000530748 PDIA3P30101 505 aaKnown RBP9.31□□□□□ -0.92
CTNND1-227ENST00000530748 ARHGAP25P42331 645 aa9.31□□□□□ -0.92
CTNND1-227ENST00000530748 MYL7Q01449 175 aa9.31□□□□□ -0.92
CTNND1-227ENST00000530748 TFDP1Q14186 410 aa9.31□□□□□ -0.92
CTNND1-227ENST00000530748 NCAPG2Q86XI2 1143 aa9.31□□□□□ -0.92
CTNND1-227ENST00000530748 LMNTD2Q8IXW0 634 aa9.31□□□□□ -0.92
CTNND1-227ENST00000530748 SMAP1Q8IYB5 467 aaPredicted RBP9.31□□□□□ -0.92
CTNND1-227ENST00000530748 ATP2A3Q93084 1043 aa9.31□□□□□ -0.92
CTNND1-227ENST00000530748 EAF2Q96CJ1 260 aaPredicted RBP9.31□□□□□ -0.92
CTNND1-227ENST00000530748 CSRNP1Q96S65 589 aa9.31□□□□□ -0.92
CTNND1-227ENST00000530748 CUEDC2Q9H467 287 aa9.31□□□□□ -0.92
CTNND1-227ENST00000530748 METTL14Q9HCE5 456 aaKnown RBP9.31□□□□□ -0.92
CTNND1-227ENST00000530748 hCG_1984214I3L0E3 225 aa9.31□□□□□ -0.92
CTNND1-227ENST00000530748 BUB1BO60566 1050 aaPredicted RBP9.31□□□□□ -0.92
CTNND1-227ENST00000530748 OAS2P29728 719 aaKnown RBP9.31□□□□□ -0.92
CTNND1-227ENST00000530748 SLC12A2P55011 1212 aa9.31□□□□□ -0.92
CTNND1-227ENST00000530748 RBM6P78332 1123 aaKnown RBP9.31□□□□□ -0.92
CTNND1-227ENST00000530748 USPL1Q5W0Q7 1092 aa9.31□□□□□ -0.92
CTNND1-227ENST00000530748 SLFN13Q68D06 897 aa9.31□□□□□ -0.92
CTNND1-227ENST00000530748 ZNF713Q8N859 430 aaPredicted RBP9.31□□□□□ -0.92
CTNND1-227ENST00000530748 GSDMBQ8TAX9 411 aa9.31□□□□□ -0.92
CTNND1-227ENST00000530748 PSMB7Q99436 277 aa9.31□□□□□ -0.92
CTNND1-227ENST00000530748 RASSF4Q9H2L5 321 aa9.31□□□□□ -0.92
CTNND1-227ENST00000530748 CCPG1Q9ULG6 757 aa9.31□□□□□ -0.92
CTNND1-227ENST00000530748 MAGI2Q86UL8 1455 aa9.31□□□□□ -0.92
CTNND1-227ENST00000530748 CNGA1P29973 690 aa9.31□□□□□ -0.92
CTNND1-227ENST00000530748 POLGP54098 1239 aaPredicted RBP9.31□□□□□ -0.92
CTNND1-227ENST00000530748 POLA2Q14181 598 aa9.31□□□□□ -0.92
CTNND1-227ENST00000530748 PPP2R5EQ16537 467 aa9.31□□□□□ -0.92
CTNND1-227ENST00000530748 CNKSR1Q969H4 720 aa9.31□□□□□ -0.92
CTNND1-227ENST00000530748 VCX3BQ9H321 246 aa9.31□□□□□ -0.92
CTNND1-227ENST00000530748 TMEM232C9JQI7 657 aa9.31□□□□□ -0.92
CTNND1-227ENST00000530748 FGAP02671 866 aa9.31□□□□□ -0.92
CTNND1-227ENST00000530748 INPP5BP32019 993 aa9.31□□□□□ -0.92
CTNND1-227ENST00000530748 BRD3Q15059 726 aa9.31□□□□□ -0.92
CTNND1-227ENST00000530748 PDZD4Q76G19 769 aaPredicted RBP9.31□□□□□ -0.92
CTNND1-227ENST00000530748 TMC4Q7Z404 712 aa9.31□□□□□ -0.92
CTNND1-227ENST00000530748 OR8K1Q8NGG5 319 aa9.31□□□□□ -0.92
CTNND1-227ENST00000530748 VCXQ9H320 206 aa9.31□□□□□ -0.92
CTNND1-227ENST00000530748 KRIT1O00522 736 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 PPFIA4O75335 1185 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 OSBPP22059 807 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 ZMYM1Q5SVZ6 1142 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 C17orf53Q8N3J3 647 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-227ENST00000530748 ADPGKQ9BRR6 497 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.3□□□□□ -0.929e-8■□□□□ 10.6
CTNND1-227ENST00000530748 MTMR6Q9Y217 621 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 BCS1LQ9Y276 419 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 PPP2R2CQ9Y2T4 447 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 RABGAP1Q9Y3P9 1069 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 KCNK3O14649 394 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 FOSP01100 380 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-227ENST00000530748 OATP04181 439 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 CCND2P30279 289 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 USP14P54578 494 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 IRX5P78411 483 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-227ENST00000530748 CUL4BQ13620 913 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 SPATA1Q5VX52 437 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 ARMCX5Q6P1M9 558 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 CCDC13Q8IYE1 715 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 ARHGEF2Q92974 986 aaKnown RBP9.3□□□□□ -0.92
CTNND1-227ENST00000530748 EPSTI1Q96J88 318 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 USP28Q96RU2 1077 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 FOXP1Q9H334 677 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-227ENST00000530748 TYW1Q9NV66 732 aaKnown RBP9.3□□□□□ -0.92
CTNND1-227ENST00000530748 PCDHA7Q9UN72 937 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 RINT1Q6NUQ1 792 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 MIS18BP1Q6P0N0 1132 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 SDCCAG8Q86SQ7 713 aaPredicted RBP9.3□□□□□ -0.92
CTNND1-227ENST00000530748 C10orf67Q8IYJ2 551 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 MMS19Q96T76 1030 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 STAP2Q9UGK3 403 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 CARMIL3Q8ND23 1372 aa9.3□□□□□ -0.92
CTNND1-227ENST00000530748 ABCC12Q96J65 1359 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms