RNA–Protein interactions for RNA: ENST00000530566.1

POLB-216, Transcript of DNA polymerase beta, humanhuman

TSL 4

Gene POLB, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-216ENST00000530566 ZNF341Q9BYN7 854 aa9.71□□□□□ -0.86
POLB-216ENST00000530566 BSDC1Q9NW68 430 aaPredicted RBP9.71□□□□□ -0.86
POLB-216ENST00000530566 GJD2Q9UKL4 321 aa9.71□□□□□ -0.86
POLB-216ENST00000530566 PRR12Q9ULL5 1215 aa9.71□□□□□ -0.86
POLB-216ENST00000530566 SLC45A1Q9Y2W3 748 aa9.71□□□□□ -0.86
POLB-216ENST00000530566 ZDBF2Q9HCK1 2354 aa9.71□□□□□ -0.86
POLB-216ENST00000530566 KRBA1A5PL33 1030 aa9.7□□□□□ -0.86
POLB-216ENST00000530566 USP17L5A8MUK1 530 aa9.7□□□□□ -0.86
POLB-216ENST00000530566 PDE8AO60658 829 aa9.7□□□□□ -0.86
POLB-216ENST00000530566 ITGB2P05107 769 aa9.7□□□□□ -0.86
POLB-216ENST00000530566 CD33P20138 364 aa9.7□□□□□ -0.86
POLB-216ENST00000530566 CYP2B6P20813 491 aa9.7□□□□□ -0.86
POLB-216ENST00000530566 FKBP1AP62942 108 aaKnown RBP9.7□□□□□ -0.86
POLB-216ENST00000530566 FAM110CQ1W6H9 321 aa9.7□□□□□ -0.86
POLB-216ENST00000530566 DZIP1LQ8IYY4 767 aaKnown RBP9.7□□□□□ -0.86
POLB-216ENST00000530566 PLBD2Q8NHP8 589 aa9.7□□□□□ -0.86
POLB-216ENST00000530566 PBX4Q9BYU1 374 aa9.7□□□□□ -0.86
POLB-216ENST00000530566 NEUROD4Q9HD90 331 aa9.7□□□□□ -0.86
POLB-216ENST00000530566 PDLIM7Q9NR12 457 aa9.7□□□□□ -0.86
POLB-216ENST00000530566 ZNF358Q9NW07 568 aa9.7□□□□□ -0.86
POLB-216ENST00000530566 SERPINA10Q9UK55 444 aa9.7□□□□□ -0.86
POLB-216ENST00000530566 COG5Q9UP83 839 aa9.7□□□□□ -0.86
POLB-216ENST00000530566 GPC6Q9Y625 555 aaPredicted RBP9.7□□□□□ -0.86
POLB-216ENST00000530566 LRRC37A2A6NM11 1700 aa9.7□□□□□ -0.86
POLB-216ENST00000530566 TRIM43BA6NCK2 446 aa9.69□□□□□ -0.86
POLB-216ENST00000530566 ADAM23O75077 832 aa9.69□□□□□ -0.86
POLB-216ENST00000530566 ZKSCAN1P17029 563 aaPredicted RBP9.69□□□□□ -0.86
POLB-216ENST00000530566 KCNJ4P48050 445 aa9.69□□□□□ -0.86
POLB-216ENST00000530566 ATP1A2P50993 1020 aa9.69□□□□□ -0.86
POLB-216ENST00000530566 FPGSQ05932 587 aa9.69□□□□□ -0.86
POLB-216ENST00000530566 SLC39A5Q6ZMH5 540 aa9.69□□□□□ -0.86
POLB-216ENST00000530566 MIGA2Q7L4E1 593 aa9.69□□□□□ -0.86
POLB-216ENST00000530566 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.69□□□□□ -0.86
POLB-216ENST00000530566 TRIM43Q96BQ3 446 aaPredicted RBP9.69□□□□□ -0.86
POLB-216ENST00000530566 RPAP1Q9BWH6 1393 aaPredicted RBP9.69□□□□□ -0.86
POLB-216ENST00000530566 CD320Q9NPF0 282 aa9.69□□□□□ -0.86
POLB-216ENST00000530566 MARK1Q9P0L2 795 aa9.69□□□□□ -0.86
POLB-216ENST00000530566 USP3Q9Y6I4 520 aa9.69□□□□□ -0.86
POLB-216ENST00000530566 A0A0G2JLL6 359 aaPredicted RBP9.68□□□□□ -0.86
POLB-216ENST00000530566 GRXCR1A8MXD5 290 aa9.68□□□□□ -0.86
POLB-216ENST00000530566 DNM1LO00429 736 aa9.68□□□□□ -0.86
POLB-216ENST00000530566 COL8A1P27658 744 aa9.68□□□□□ -0.86
POLB-216ENST00000530566 DGKGP49619 791 aa9.68□□□□□ -0.86
POLB-216ENST00000530566 TEAD4Q15561 434 aa9.68□□□□□ -0.86
POLB-216ENST00000530566 TRIM60Q495X7 471 aa9.68□□□□□ -0.86
POLB-216ENST00000530566 ZNF468Q5VIY5 522 aaPredicted RBP9.68□□□□□ -0.86
POLB-216ENST00000530566 CHSY3Q70JA7 882 aa9.68□□□□□ -0.86
POLB-216ENST00000530566 PRRT2Q7Z6L0 340 aaPredicted RBP9.68□□□□□ -0.86
POLB-216ENST00000530566 MSRAQ9UJ68 235 aa9.68□□□□□ -0.86
POLB-216ENST00000530566 TTF2Q9UNY4 1162 aaKnown RBP9.68□□□□□ -0.86
POLB-216ENST00000530566 ZNF232Q9UNY5 417 aa9.68□□□□□ -0.86
POLB-216ENST00000530566 JAG2Q9Y219 1238 aa9.68□□□□□ -0.86
POLB-216ENST00000530566 BAHCC1Q9P281 2608 aa9.68□□□□□ -0.86
POLB-216ENST00000530566 PKD1L2Q7Z442 2459 aa9.67□□□□□ -0.86
POLB-216ENST00000530566 XRCC5P13010 732 aaKnown RBP9.67□□□□□ -0.86
POLB-216ENST00000530566 HOXB4P17483 251 aaPredicted RBP9.67□□□□□ -0.86
POLB-216ENST00000530566 NOS2P35228 1153 aa9.67□□□□□ -0.86
POLB-216ENST00000530566 CACNB3P54284 484 aa9.67□□□□□ -0.86
POLB-216ENST00000530566 TRIM28Q13263 835 aaKnown RBP9.67□□□□□ -0.86
POLB-216ENST00000530566 ANKRD2Q9GZV1 360 aa9.67□□□□□ -0.86
POLB-216ENST00000530566 SLC28A3Q9HAS3 691 aa9.67□□□□□ -0.86
POLB-216ENST00000530566 CHMP3Q9Y3E7 222 aa9.67□□□□□ -0.86
POLB-216ENST00000530566 TACC3Q9Y6A5 838 aa9.67□□□□□ -0.86
POLB-216ENST00000530566 DOCK3Q8IZD9 2030 aa9.66□□□□□ -0.86
POLB-216ENST00000530566 RAG1P15918 1043 aa9.66□□□□□ -0.86
POLB-216ENST00000530566 RAB30Q15771 203 aa9.66□□□□□ -0.86
POLB-216ENST00000530566 GJD3Q8N144 294 aa9.66□□□□□ -0.86
POLB-216ENST00000530566 DEPDC4Q8N2C3 294 aa9.66□□□□□ -0.86
POLB-216ENST00000530566 SOCS4Q8WXH5 440 aa9.66□□□□□ -0.86
POLB-216ENST00000530566 LPAR1Q92633 364 aa9.66□□□□□ -0.86
POLB-216ENST00000530566 POM121Q96HA1 1249 aa9.66□□□□□ -0.86
POLB-216ENST00000530566 TMOD2Q9NZR1 351 aa9.66□□□□□ -0.86
POLB-216ENST00000530566 ZHX2Q9Y6X8 837 aa9.66□□□□□ -0.86
POLB-216ENST00000530566 SPTBN4Q9H254 2564 aa9.66□□□□□ -0.86
POLB-216ENST00000530566 CACNA1BQ00975 2339 aa9.65□□□□□ -0.86
POLB-216ENST00000530566 MYBBP1AQ9BQG0 1328 aaKnown RBP9.65□□□□□ -0.86
POLB-216ENST00000530566 MSCO60682 206 aa9.65□□□□□ -0.86
POLB-216ENST00000530566 IL1R1P14778 569 aa9.65□□□□□ -0.86
POLB-216ENST00000530566 ALAS2P22557 587 aa9.65□□□□□ -0.86
POLB-216ENST00000530566 TXLNAP40222 546 aa9.65□□□□□ -0.86
POLB-216ENST00000530566 CRKP46108 304 aa9.65□□□□□ -0.86
POLB-216ENST00000530566 GCLCP48506 637 aaPredicted RBP9.65□□□□□ -0.86
POLB-216ENST00000530566 NOL9Q5SY16 702 aaKnown RBP9.65□□□□□ -0.86
POLB-216ENST00000530566 ZNF804AQ7Z570 1209 aa9.65□□□□□ -0.86
POLB-216ENST00000530566 FAM83AQ86UY5 434 aa9.65□□□□□ -0.86
POLB-216ENST00000530566 SLC9A9Q8IVB4 645 aa9.65□□□□□ -0.86
POLB-216ENST00000530566 PLEKHM2Q8IWE5 1019 aa9.65□□□□□ -0.86
POLB-216ENST00000530566 MFSD14AQ96MC6 490 aa9.65□□□□□ -0.86
POLB-216ENST00000530566 SUV39H2Q9H5I1 410 aa9.65□□□□□ -0.86
POLB-216ENST00000530566 ZNF112Q9UJU3 913 aa9.65□□□□□ -0.86
POLB-216ENST00000530566 CHD7Q9P2D1 2997 aa9.64□□□□□ -0.87
POLB-216ENST00000530566 PLXNA1Q9UIW2 1896 aa9.64□□□□□ -0.87
POLB-216ENST00000530566 SERTM1A2A2V5 107 aa9.64□□□□□ -0.87
POLB-216ENST00000530566 EFSO43281 561 aa9.64□□□□□ -0.87
POLB-216ENST00000530566 CNGA1P29973 690 aa9.64□□□□□ -0.87
POLB-216ENST00000530566 IGHMBP2P38935 993 aaKnown RBP9.64□□□□□ -0.87
POLB-216ENST00000530566 EPHA4P54764 986 aa9.64□□□□□ -0.87
POLB-216ENST00000530566 PCBP4P57723 403 aaKnown RBP9.64□□□□□ -0.87
POLB-216ENST00000530566 MFSD14BQ5SR56 506 aa9.64□□□□□ -0.87
POLB-216ENST00000530566 GJC2Q5T442 439 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms