RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 DMP1Q13316 513 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-221ENST00000529873 TTLL7Q6ZT98 887 aa9.34□□□□□ -0.91
CTNND1-221ENST00000529873 SND1Q7KZF4 910 aaKnown RBP eCLIP9.34□□□□□ -0.91
CTNND1-221ENST00000529873 C10orf67Q8IYJ2 551 aa9.34□□□□□ -0.91
CTNND1-221ENST00000529873 FNBP4Q8N3X1 1017 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-221ENST00000529873 SLC17A8Q8NDX2 589 aa9.34□□□□□ -0.91
CTNND1-221ENST00000529873 GLG1Q92896 1179 aa9.34□□□□□ -0.91
CTNND1-221ENST00000529873 PLEKHF1Q96S99 279 aa9.34□□□□□ -0.91
CTNND1-221ENST00000529873 VPS37BQ9H9H4 285 aa9.34□□□□□ -0.91
CTNND1-221ENST00000529873 GPR108Q9NPR9 543 aa9.34□□□□□ -0.91
CTNND1-221ENST00000529873 KIAA1468Q9P260 1216 aa9.34□□□□□ -0.91
CTNND1-221ENST00000529873 LAD1O00515 517 aa9.33□□□□□ -0.92
CTNND1-221ENST00000529873 GIPC1O14908 333 aa9.33□□□□□ -0.92
CTNND1-221ENST00000529873 KIF1CO43896 1103 aaKnown RBP9.33□□□□□ -0.92
CTNND1-221ENST00000529873 ZNF131P52739 623 aa9.33□□□□□ -0.92
CTNND1-221ENST00000529873 LRRC24Q50LG9 513 aa9.33□□□□□ -0.92
CTNND1-221ENST00000529873 SMCR8Q8TEV9 937 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-221ENST00000529873 SPATS2LQ9NUQ6 558 aaKnown RBP9.33□□□□□ -0.92
CTNND1-221ENST00000529873 FMNL1O95466 1100 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-221ENST00000529873 CMA1P23946 247 aa9.33□□□□□ -0.92
CTNND1-221ENST00000529873 PNMA1Q8ND90 353 aa9.33□□□□□ -0.92
CTNND1-221ENST00000529873 GPKOWQ92917 476 aaPredicted RBP eCLIP9.33□□□□□ -0.92
CTNND1-221ENST00000529873 XDHP47989 1333 aa9.33□□□□□ -0.92
CTNND1-221ENST00000529873 NPHP4O75161 1426 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-221ENST00000529873 MAGI3Q5TCQ9 1506 aa9.33□□□□□ -0.92
CTNND1-221ENST00000529873 ALAS1P13196 640 aa9.33□□□□□ -0.92
CTNND1-221ENST00000529873 YARSP54577 528 aaKnown RBP9.33□□□□□ -0.92
CTNND1-221ENST00000529873 ADKP55263 362 aaKnown RBP9.33□□□□□ -0.92
CTNND1-221ENST00000529873 UBE3CQ15386 1083 aa9.33□□□□□ -0.92
CTNND1-221ENST00000529873 HADHQ16836 314 aaKnown RBP9.33□□□□□ -0.92
CTNND1-221ENST00000529873 XKR9Q5GH70 373 aa9.33□□□□□ -0.92
CTNND1-221ENST00000529873 CASC4Q6P4E1 433 aa9.33□□□□□ -0.92
CTNND1-221ENST00000529873 PAGR1Q9BTK6 254 aa9.33□□□□□ -0.92
CTNND1-221ENST00000529873 USP44Q9H0E7 712 aa9.33□□□□□ -0.92
CTNND1-221ENST00000529873 ZNF804BA4D1E1 1349 aa9.33□□□□□ -0.92
CTNND1-221ENST00000529873 STAT1P42224 750 aa9.33□□□□□ -0.92
CTNND1-221ENST00000529873 ICA1Q05084 483 aa9.33□□□□□ -0.92
CTNND1-221ENST00000529873 CCDC38Q502W7 563 aa9.33□□□□□ -0.92
CTNND1-221ENST00000529873 ZCCHC11Q5TAX3 1644 aaKnown RBP9.33□□□□□ -0.92
CTNND1-221ENST00000529873 ARHGAP24Q8N264 748 aa9.33□□□□□ -0.92
CTNND1-221ENST00000529873 STAMQ92783 540 aa9.33□□□□□ -0.92
CTNND1-221ENST00000529873 SPC25Q9HBM1 224 aa9.33□□□□□ -0.92
CTNND1-221ENST00000529873 HYOU1Q9Y4L1 999 aa9.33□□□□□ -0.92
CTNND1-221ENST00000529873 ABCA8O94911 1581 aa9.33□□□□□ -0.92
CTNND1-221ENST00000529873 GOLGA8KD6RF30 607 aa9.33□□□□□ -0.92
CTNND1-221ENST00000529873 ERCC3P19447 782 aa9.33□□□□□ -0.92
CTNND1-221ENST00000529873 CDC25BP30305 580 aa9.33□□□□□ -0.92
CTNND1-221ENST00000529873 PDE1CQ14123 709 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-221ENST00000529873 KIF22Q14807 665 aa9.33□□□□□ -0.92
CTNND1-221ENST00000529873 DOK7Q18PE1 504 aa9.33□□□□□ -0.92
CTNND1-221ENST00000529873 VCX3AQ9NNX9 186 aa9.33□□□□□ -0.92
CTNND1-221ENST00000529873 C1orf112Q9NSG2 853 aa9.33□□□□□ -0.92
CTNND1-221ENST00000529873 TACC3Q9Y6A5 838 aa9.33□□□□□ -0.92
CTNND1-221ENST00000529873 NR1I2O75469 434 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 CRKLP46109 303 aaKnown RBP9.32□□□□□ -0.92
CTNND1-221ENST00000529873 SCNN1DP51172 638 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 PRPF31Q8WWY3 499 aaKnown RBP9.32□□□□□ -0.92
CTNND1-221ENST00000529873 DCPSQ96C86 337 aaKnown RBP9.32□□□□□ -0.92
CTNND1-221ENST00000529873 EDC3Q96F86 508 aaKnown RBP9.32□□□□□ -0.92
CTNND1-221ENST00000529873 LSG1Q9H089 658 aaKnown RBP9.32□□□□□ -0.92
CTNND1-221ENST00000529873 PCDHA4Q9UN74 947 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 PCDHA12Q9UN75 941 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 KLRF2D3W0D1 207 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 NDUFAB1O14561 156 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 PIK3CAP42336 1068 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 PLA2G4DQ86XP0 818 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 RDH13Q8NBN7 331 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 SYMPKQ92797 1274 aaKnown RBP9.32□□□□□ -0.92
CTNND1-221ENST00000529873 PPP1R12CQ9BZL4 782 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 SAR1BQ9Y6B6 198 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 ERVK-7P63135 1459 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 SORBS3O60504 671 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 ABCB5Q2M3G0 1257 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 TRIM50Q86XT4 487 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 PALM2Q8IXS6 379 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 RUNDC3BQ96NL0 473 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 KRT12Q99456 494 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 NLRC4Q9NPP4 1024 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 YEATS2Q9ULM3 1422 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 BUB1BO60566 1050 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-221ENST00000529873 PPFIA1Q13136 1202 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 PPP2R5DQ14738 602 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 ASPRV1Q53RT3 343 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 GPIHBP1Q8IV16 184 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 NCAPGQ9BPX3 1015 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 MIS12Q9H081 205 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 NRBP2Q9NSY0 501 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 LEMD3Q9Y2U8 911 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 CLIC4Q9Y696 253 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 PPP6R2O75170 966 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 KRT15P19012 456 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 CNGA1P29973 690 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 SCRN1Q12765 414 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 MCUR1Q96AQ8 359 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 HAUS1Q96CS2 278 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 DDX27Q96GQ7 796 aaKnown RBP9.32□□□□□ -0.92
CTNND1-221ENST00000529873 GREM2Q9H772 168 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 COL4A3BPQ9Y5P4 624 aa9.32□□□□□ -0.92
CTNND1-221ENST00000529873 GOLGA8HP0CJ92 632 aa9.31□□□□□ -0.92
CTNND1-221ENST00000529873 PDIA3P30101 505 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms