RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 EAF2Q96CJ1 260 aaPredicted RBP4.27□□□□□ -1.73
PTPRC-213ENST00000529828 NUP88Q99567 741 aaPredicted RBP4.27□□□□□ -1.73
PTPRC-213ENST00000529828 CERS4Q9HA82 394 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 GPR108Q9NPR9 543 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 SMCHD1A6NHR9 2005 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 MUC6Q6W4X9 2439 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 PLXNA1Q9UIW2 1896 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 USP34Q70CQ2 3546 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 FAM86C2PA6NEL3 165 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 TULP1O00294 542 aaPredicted RBP4.27□□□□□ -1.73
PTPRC-213ENST00000529828 PRKAB2O43741 272 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 SLC25A27O95847 323 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 ASGR1P07306 291 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 STAT3P40763 770 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 CCL23P55773 120 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 BEX3Q00994 111 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 FAM83BQ5T0W9 1011 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 AKNAD1Q5T1N1 836 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 RASIP1Q5U651 963 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 KRT40Q6A162 431 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 TMEM179Q6ZVK1 233 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 STK11IPQ8N1F8 1099 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 TMEM199Q8N511 208 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 TMEM57Q8N5G2 664 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 KLHDC9Q8NEP7 349 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 NUP133Q8WUM0 1156 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 GLT1D1Q96MS3 346 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 CRNKL1Q9BZJ0 848 aaKnown RBP4.27□□□□□ -1.73
PTPRC-213ENST00000529828 EPHX3Q9H6B9 360 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 VCPKMTQ9H867 229 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 ARMT1Q9H993 441 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 ARHGEF10LQ9HCE6 1279 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 MSRAQ9UJ68 235 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 DDX49Q9Y6V7 483 aaKnown RBP4.27□□□□□ -1.73
PTPRC-213ENST00000529828 TCF20Q9UGU0 1960 aaKnown RBP4.27□□□□□ -1.73
PTPRC-213ENST00000529828 DMDP11532 3685 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 ZNF532Q9HCE3 1301 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 ROBO3Q96MS0 1386 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 MOXD2PA6NHM9 499 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 ZBBXA8MT70 800 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 VWA5AO00534 786 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 SNAI1O95863 264 aaPredicted RBP4.26□□□□□ -1.73
PTPRC-213ENST00000529828 CHGBP05060 677 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 EEF2P13639 858 aaKnown RBP4.26□□□□□ -1.73
PTPRC-213ENST00000529828 PDE6AP16499 860 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 RAB30Q15771 203 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 SLC9C2Q5TAH2 1124 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 PPP2R2DQ66LE6 453 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 SNRNP48Q6IEG0 339 aaKnown RBP4.26□□□□□ -1.73
PTPRC-213ENST00000529828 CCSAPQ6IQ19 270 aaPredicted RBP4.26□□□□□ -1.73
PTPRC-213ENST00000529828 PSRC1Q6PGN9 363 aaPredicted RBP4.26□□□□□ -1.73
PTPRC-213ENST00000529828 AACSQ86V21 672 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 RIOX2Q8IUF8 465 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 TRMT2AQ8IZ69 625 aaKnown RBP4.26□□□□□ -1.73
PTPRC-213ENST00000529828 CHMP4CQ96CF2 233 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 ZNF512BQ96KM6 892 aaPredicted RBP4.26□□□□□ -1.73
PTPRC-213ENST00000529828 TOX2Q96NM4 488 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 DNAJC2Q99543 621 aaKnown RBP4.26□□□□□ -1.73
PTPRC-213ENST00000529828 SLC28A3Q9HAS3 691 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 IL1RAPL2Q9NP60 686 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 DCP1AQ9NPI6 582 aaPredicted RBP4.26□□□□□ -1.73
PTPRC-213ENST00000529828 NRBP1Q9UHY1 535 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 ZNF214Q9UL59 606 aaPredicted RBP4.26□□□□□ -1.73
PTPRC-213ENST00000529828 FAM184BQ9ULE4 1060 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 PPP1R9AQ9ULJ8 1098 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 EXOC6BQ9Y2D4 811 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 TMX2Q9Y320 296 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 RIPK3Q9Y572 518 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 MYO15AQ9UKN7 3530 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 A0A0U1RQG5 324 aaPredicted RBP4.26□□□□□ -1.73
PTPRC-213ENST00000529828 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.26□□□□□ -1.73
PTPRC-213ENST00000529828 ARVCFO00192 962 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 GOLIM4O00461 696 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 WDR46O15213 610 aaKnown RBP4.26□□□□□ -1.73
PTPRC-213ENST00000529828 MBD4O95243 580 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 BMP1P13497 986 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 ACVR2BQ13705 512 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 GNASQ5JWF2 1037 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 PPP4R3BQ5MIZ7 849 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 CCDC174Q6PII3 467 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 CXCL17Q6UXB2 119 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 NOL8Q76FK4 1167 aaKnown RBP4.26□□□□□ -1.73
PTPRC-213ENST00000529828 FAM126BQ8IXS8 530 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 CPXCR1Q8N123 301 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 REPS2Q8NFH8 660 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 SSH3Q8TE77 659 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 PPP1R13LQ8WUF5 828 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 DDX11Q96FC9 970 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 SCLYQ96I15 445 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 TSEN34Q9BSV6 310 aaKnown RBP4.26□□□□□ -1.73
PTPRC-213ENST00000529828 LRFN3Q9BTN0 628 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 SH2D4AQ9H788 454 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 IL23AQ9NPF7 189 aa4.26□□□□□ -1.73
PTPRC-213ENST00000529828 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.26□□□□□ -1.73
PTPRC-213ENST00000529828 PRRC2BQ5JSZ5 2229 aaKnown RBP4.25□□□□□ -1.73
PTPRC-213ENST00000529828 TRIOO75962 3097 aa4.25□□□□□ -1.73
PTPRC-213ENST00000529828 MROH7Q68CQ1 1323 aa4.25□□□□□ -1.73
PTPRC-213ENST00000529828 COL11A1P12107 1806 aaPredicted RBP4.25□□□□□ -1.73
PTPRC-213ENST00000529828 EPOPA6NHQ4 379 aa4.25□□□□□ -1.73
PTPRC-213ENST00000529828 TLR3O15455 904 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms