RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 RANBP17Q9H2T7 1088 aaKnown RBP38.83■■■■□ 3.81
SSSCA1-205ENST00000527920 SYNGAP1Q96PV0 1343 aa38.83■■■■□ 3.81
SSSCA1-205ENST00000527920 ZNF543Q08ER8 600 aa38.82■■■■□ 3.8
SSSCA1-205ENST00000527920 AGBL1Q96MI9 1066 aa38.82■■■■□ 3.8
SSSCA1-205ENST00000527920 ZSCAN10Q96SZ4 725 aaPredicted RBP38.82■■■■□ 3.8
SSSCA1-205ENST00000527920 ZSWIM5Q9P217 1185 aa38.82■■■■□ 3.8
SSSCA1-205ENST00000527920 PFASO15067 1338 aa38.82■■■■□ 3.8
SSSCA1-205ENST00000527920 FRMPD3Q5JV73 1810 aa38.82■■■■□ 3.8
SSSCA1-205ENST00000527920 SYDE2Q5VT97 1194 aa38.81■■■■□ 3.8
SSSCA1-205ENST00000527920 ZKSCAN3Q9BRR0 538 aa38.81■■■■□ 3.8
SSSCA1-205ENST00000527920 RNF146Q9NTX7 359 aa38.81■■■■□ 3.8
SSSCA1-205ENST00000527920 PLXNA1Q9UIW2 1896 aa38.81■■■■□ 3.8
SSSCA1-205ENST00000527920 ICAM1P05362 532 aa38.8■■■■□ 3.8
SSSCA1-205ENST00000527920 PRAMEF19Q5SWL8 479 aa38.8■■■■□ 3.8
SSSCA1-205ENST00000527920 TTBK2Q6IQ55 1244 aa38.8■■■■□ 3.8
SSSCA1-205ENST00000527920 HOMER2Q9NSB8 354 aa38.8■■■■□ 3.8
SSSCA1-205ENST00000527920 U3KPZ7 1027 aaPredicted RBP38.8■■■■□ 3.8
SSSCA1-205ENST00000527920 DNM1LO00429 736 aa38.79■■■■□ 3.8
SSSCA1-205ENST00000527920 GPATCH4Q5T3I0 446 aaKnown RBP38.79■■■■□ 3.8
SSSCA1-205ENST00000527920 CNPY2Q9Y2B0 182 aa38.79■■■■□ 3.8
SSSCA1-205ENST00000527920 SLC16A2P36021 539 aa38.78■■■■□ 3.8
SSSCA1-205ENST00000527920 PTH1RQ03431 593 aa38.78■■■■□ 3.8
SSSCA1-205ENST00000527920 CCDC174Q6PII3 467 aa38.78■■■■□ 3.8
SSSCA1-205ENST00000527920 ENAHQ8N8S7 591 aaPredicted RBP38.78■■■■□ 3.8
SSSCA1-205ENST00000527920 ARRDC4Q8NCT1 418 aa38.78■■■■□ 3.8
SSSCA1-205ENST00000527920 GPCPD1Q9NPB8 672 aa38.78■■■■□ 3.8
SSSCA1-205ENST00000527920 PNMA2Q9UL42 364 aa38.78■■■■□ 3.8
SSSCA1-205ENST00000527920 FRMPD2Q68DX3 1309 aaPredicted RBP38.78■■■■□ 3.8
SSSCA1-205ENST00000527920 PNMA1Q8ND90 353 aa38.77■■■■□ 3.8
SSSCA1-205ENST00000527920 TRERF1Q96PN7 1200 aa38.77■■■■□ 3.8
SSSCA1-205ENST00000527920 A1CFQ9NQ94 594 aaKnown RBP38.77■■■■□ 3.8
SSSCA1-205ENST00000527920 CCPG1Q9ULG6 757 aa38.77■■■■□ 3.8
SSSCA1-205ENST00000527920 TNKSO95271 1327 aa38.76■■■■□ 3.8
SSSCA1-205ENST00000527920 ALAS1P13196 640 aa38.76■■■■□ 3.8
SSSCA1-205ENST00000527920 FGD4Q96M96 766 aa38.76■■■■□ 3.8
SSSCA1-205ENST00000527920 UBAC1Q9BSL1 405 aa38.76■■■■□ 3.8
SSSCA1-205ENST00000527920 KAT14Q9H8E8 782 aa38.76■■■■□ 3.8
SSSCA1-205ENST00000527920 ZNF865P0CJ78 1059 aaPredicted RBP38.75■■■■□ 3.79
SSSCA1-205ENST00000527920 SNAP25P60880 206 aa38.75■■■■□ 3.79
SSSCA1-205ENST00000527920 FAM133AQ8N9E0 248 aa38.75■■■■□ 3.79
SSSCA1-205ENST00000527920 CYP21A2P08686 494 aa38.74■■■■□ 3.79
SSSCA1-205ENST00000527920 TRDNQ13061 729 aa38.74■■■■□ 3.79
SSSCA1-205ENST00000527920 POTEB2H3BUK9 544 aa38.73■■■■□ 3.79
SSSCA1-205ENST00000527920 SNAI1O95863 264 aaPredicted RBP38.73■■■■□ 3.79
SSSCA1-205ENST00000527920 AKR1A1P14550 325 aa38.73■■■■□ 3.79
SSSCA1-205ENST00000527920 TAL1P17542 331 aaPredicted RBP38.73■■■■□ 3.79
SSSCA1-205ENST00000527920 BMP2KLQ5H9B9 411 aa38.73■■■■□ 3.79
SSSCA1-205ENST00000527920 MAP4K1Q92918 833 aa38.73■■■■□ 3.79
SSSCA1-205ENST00000527920 ALPK3Q96L96 1907 aa38.73■■■■□ 3.79
SSSCA1-205ENST00000527920 RARBP10826 455 aa38.72■■■■□ 3.79
SSSCA1-205ENST00000527920 WDR19Q8NEZ3 1342 aa38.71■■■■□ 3.79
SSSCA1-205ENST00000527920 ASPRV1Q53RT3 343 aa38.7■■■■□ 3.79
SSSCA1-205ENST00000527920 MUM1L1Q5H9M0 696 aa38.7■■■■□ 3.79
SSSCA1-205ENST00000527920 HABP4Q5JVS0 413 aaKnown RBP38.7■■■■□ 3.79
SSSCA1-205ENST00000527920 ANO1Q5XXA6 986 aa38.7■■■■□ 3.79
SSSCA1-205ENST00000527920 ABHD16BQ9H3Z7 469 aa38.7■■■■□ 3.79
SSSCA1-205ENST00000527920 CDKN2AIPQ9NXV6 580 aaPredicted RBP38.7■■■■□ 3.79
SSSCA1-205ENST00000527920 CYP39A1Q9NYL5 469 aa38.7■■■■□ 3.79
SSSCA1-205ENST00000527920 KBTBD13C9JR72 458 aa38.69■■■■□ 3.78
SSSCA1-205ENST00000527920 CNTN2Q02246 1040 aa38.69■■■■□ 3.78
SSSCA1-205ENST00000527920 SEC23AQ15436 765 aa38.69■■■■□ 3.78
SSSCA1-205ENST00000527920 XPNPEP3Q9NQH7 507 aa38.69■■■■□ 3.78
SSSCA1-205ENST00000527920 COLQQ9Y215 455 aaPredicted RBP38.69■■■■□ 3.78
SSSCA1-205ENST00000527920 LRRC41Q15345 812 aa38.68■■■■□ 3.78
SSSCA1-205ENST00000527920 GJC2Q5T442 439 aaPredicted RBP38.68■■■■□ 3.78
SSSCA1-205ENST00000527920 IFIT1BQ5T764 474 aaKnown RBP38.68■■■■□ 3.78
SSSCA1-205ENST00000527920 ARMCX2Q7L311 632 aa38.68■■■■□ 3.78
SSSCA1-205ENST00000527920 C7orf61Q8IZ16 206 aa38.68■■■■□ 3.78
SSSCA1-205ENST00000527920 FAM184BQ9ULE4 1060 aa38.68■■■■□ 3.78
SSSCA1-205ENST00000527920 CYB5R4Q7L1T6 521 aa38.67■■■■□ 3.78
SSSCA1-205ENST00000527920 SENP6Q9GZR1 1112 aaPredicted RBP38.67■■■■□ 3.78
SSSCA1-205ENST00000527920 ASB14A6NK59 587 aa38.66■■■■□ 3.78
SSSCA1-205ENST00000527920 ACVR2BQ13705 512 aa38.66■■■■□ 3.78
SSSCA1-205ENST00000527920 LRRC26Q2I0M4 334 aa38.66■■■■□ 3.78
SSSCA1-205ENST00000527920 KIAA1211Q6ZU35 1233 aa38.66■■■■□ 3.78
SSSCA1-205ENST00000527920 ESYT1Q9BSJ8 1104 aa38.66■■■■□ 3.78
SSSCA1-205ENST00000527920 SOWAHBA6NEL2 793 aa38.65■■■■□ 3.78
SSSCA1-205ENST00000527920 E7EWF7 191 aa38.65■■■■□ 3.78
SSSCA1-205ENST00000527920 GOLGA8HP0CJ92 632 aa38.65■■■■□ 3.78
SSSCA1-205ENST00000527920 RALYLQ86SE5 291 aaKnown RBP38.65■■■■□ 3.78
SSSCA1-205ENST00000527920 CCDC144CPQ8IYA2 1237 aa38.65■■■■□ 3.78
SSSCA1-205ENST00000527920 NCOA7Q8NI08 942 aa38.65■■■■□ 3.78
SSSCA1-205ENST00000527920 PRO3102Q9H379 93 aa38.65■■■■□ 3.78
SSSCA1-205ENST00000527920 ZHX1Q9UKY1 873 aaPredicted RBP38.65■■■■□ 3.78
SSSCA1-205ENST00000527920 RBM8AQ9Y5S9 174 aaKnown RBP38.65■■■■□ 3.78
SSSCA1-205ENST00000527920 CHRDL2Q6WN34 429 aa38.64■■■■□ 3.78
SSSCA1-205ENST00000527920 RNF180Q86T96 592 aa38.64■■■■□ 3.78
SSSCA1-205ENST00000527920 PARP1P09874 1014 aaKnown RBP38.63■■■■□ 3.77
SSSCA1-205ENST00000527920 NSMFQ6X4W1 530 aa38.63■■■■□ 3.77
SSSCA1-205ENST00000527920 KATNBL1Q9H079 304 aa38.63■■■■□ 3.77
SSSCA1-205ENST00000527920 TAF6LQ9Y6J9 622 aa38.63■■■■□ 3.77
SSSCA1-205ENST00000527920 SMCHD1A6NHR9 2005 aa38.63■■■■□ 3.77
SSSCA1-205ENST00000527920 LOC102724159A0A0B4J2E5 919 aa38.62■■■■□ 3.77
SSSCA1-205ENST00000527920 PWP2Q15269 919 aaKnown RBP38.62■■■■□ 3.77
SSSCA1-205ENST00000527920 CLEC4DQ8WXI8 215 aa38.62■■■■□ 3.77
SSSCA1-205ENST00000527920 UBA5Q9GZZ9 404 aa38.62■■■■□ 3.77
SSSCA1-205ENST00000527920 MAF1Q9H063 256 aa38.62■■■■□ 3.77
SSSCA1-205ENST00000527920 LSG1Q9H089 658 aaKnown RBP38.62■■■■□ 3.77
SSSCA1-205ENST00000527920 NFIBO00712 420 aa38.61■■■■□ 3.77
SSSCA1-205ENST00000527920 DUSP11O75319 330 aaKnown RBP38.61■■■■□ 3.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms