RNA–Protein interactions for RNA: ENST00000527612.1

PPFIA1-209, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-209ENST00000527612 SLC1A4P43007 532 aa8.05□□□□□ -1.12
PPFIA1-209ENST00000527612 MAGEA10P43363 369 aaPredicted RBP8.05□□□□□ -1.12
PPFIA1-209ENST00000527612 IRX6P78412 446 aaPredicted RBP8.05□□□□□ -1.12
PPFIA1-209ENST00000527612 LRRC41Q15345 812 aa8.05□□□□□ -1.12
PPFIA1-209ENST00000527612 GJC2Q5T442 439 aaPredicted RBP8.05□□□□□ -1.12
PPFIA1-209ENST00000527612 MAMDC4Q6UXC1 1216 aa8.05□□□□□ -1.12
PPFIA1-209ENST00000527612 KCTD1Q719H9 257 aa8.05□□□□□ -1.12
PPFIA1-209ENST00000527612 ZNF467Q7Z7K2 595 aaPredicted RBP8.05□□□□□ -1.12
PPFIA1-209ENST00000527612 CPXCR1Q8N123 301 aa8.05□□□□□ -1.12
PPFIA1-209ENST00000527612 RILPL2Q969X0 211 aa8.05□□□□□ -1.12
PPFIA1-209ENST00000527612 CHMP4CQ96CF2 233 aa8.05□□□□□ -1.12
PPFIA1-209ENST00000527612 TMEM47Q9BQJ4 181 aa8.05□□□□□ -1.12
PPFIA1-209ENST00000527612 A1CFQ9NQ94 594 aaKnown RBP8.05□□□□□ -1.12
PPFIA1-209ENST00000527612 HOMER2Q9NSB8 354 aa8.05□□□□□ -1.12
PPFIA1-209ENST00000527612 SLC5A4Q9NY91 659 aa8.05□□□□□ -1.12
PPFIA1-209ENST00000527612 PRR12Q9ULL5 1215 aa8.05□□□□□ -1.12
PPFIA1-209ENST00000527612 PTPRSQ13332 1948 aa8.04□□□□□ -1.12
PPFIA1-209ENST00000527612 SNAI1O95863 264 aaPredicted RBP8.04□□□□□ -1.12
PPFIA1-209ENST00000527612 SNHG28P0DPA3 235 aa8.04□□□□□ -1.12
PPFIA1-209ENST00000527612 PDHBP11177 359 aa8.04□□□□□ -1.12
PPFIA1-209ENST00000527612 PCP11498 1178 aaKnown RBP8.04□□□□□ -1.12
PPFIA1-209ENST00000527612 AKR1A1P14550 325 aa8.04□□□□□ -1.12
PPFIA1-209ENST00000527612 PPP4R3BQ5MIZ7 849 aa8.04□□□□□ -1.12
PPFIA1-209ENST00000527612 AKNAD1Q5T1N1 836 aa8.04□□□□□ -1.12
PPFIA1-209ENST00000527612 TTC22Q5TAA0 569 aa8.04□□□□□ -1.12
PPFIA1-209ENST00000527612 CWC27Q6UX04 472 aaKnown RBP8.04□□□□□ -1.12
PPFIA1-209ENST00000527612 FAM160B2Q86V87 743 aa8.04□□□□□ -1.12
PPFIA1-209ENST00000527612 MSL3Q8N5Y2 521 aaKnown RBP8.04□□□□□ -1.12
PPFIA1-209ENST00000527612 FAM133AQ8N9E0 248 aa8.04□□□□□ -1.12
PPFIA1-209ENST00000527612 CHST13Q8NET6 341 aa8.04□□□□□ -1.12
PPFIA1-209ENST00000527612 DCAF4Q8WV16 495 aa8.04□□□□□ -1.12
PPFIA1-209ENST00000527612 AGBL1Q96MI9 1066 aa8.04□□□□□ -1.12
PPFIA1-209ENST00000527612 RANBP17Q9H2T7 1088 aaKnown RBP8.04□□□□□ -1.12
PPFIA1-209ENST00000527612 ACAD9Q9H845 621 aa8.04□□□□□ -1.12
PPFIA1-209ENST00000527612 XPNPEP3Q9NQH7 507 aa8.04□□□□□ -1.12
PPFIA1-209ENST00000527612 DIAPH3Q9NSV4 1193 aa8.04□□□□□ -1.12
PPFIA1-209ENST00000527612 RNF146Q9NTX7 359 aa8.04□□□□□ -1.12
PPFIA1-209ENST00000527612 TCP11L1Q9NUJ3 509 aa8.04□□□□□ -1.12
PPFIA1-209ENST00000527612 CUL9Q8IWT3 2517 aa8.04□□□□□ -1.12
PPFIA1-209ENST00000527612 RAD50Q92878 1312 aa8.03□□□□□ -1.12
PPFIA1-209ENST00000527612 MYH7BA7E2Y1 1941 aa8.03□□□□□ -1.12
PPFIA1-209ENST00000527612 SCN5AQ14524 2016 aa8.03□□□□□ -1.12
PPFIA1-209ENST00000527612 MYADML2A6NDP7 307 aa8.03□□□□□ -1.12
PPFIA1-209ENST00000527612 KBTBD13C9JR72 458 aa8.03□□□□□ -1.12
PPFIA1-209ENST00000527612 ZBED4O75132 1171 aa8.03□□□□□ -1.12
PPFIA1-209ENST00000527612 PGK1P00558 417 aa8.03□□□□□ -1.12
PPFIA1-209ENST00000527612 FDX1P10109 184 aa8.03□□□□□ -1.12
PPFIA1-209ENST00000527612 RARBP10826 455 aa8.03□□□□□ -1.12
PPFIA1-209ENST00000527612 TOP1P11387 765 aaKnown RBP8.03□□□□□ -1.12
PPFIA1-209ENST00000527612 BMP8BP34820 402 aa8.03□□□□□ -1.12
PPFIA1-209ENST00000527612 ATN1P54259 1190 aaPredicted RBP8.03□□□□□ -1.12
PPFIA1-209ENST00000527612 RTP1P59025 263 aa8.03□□□□□ -1.12
PPFIA1-209ENST00000527612 SNAP25P60880 206 aa8.03□□□□□ -1.12
PPFIA1-209ENST00000527612 CNTN2Q02246 1040 aa8.03□□□□□ -1.12
PPFIA1-209ENST00000527612 CCDC96Q2M329 555 aa8.03□□□□□ -1.12
PPFIA1-209ENST00000527612 MUM1L1Q5H9M0 696 aa8.03□□□□□ -1.12
PPFIA1-209ENST00000527612 RRP12Q5JTH9 1297 aaKnown RBP8.03□□□□□ -1.12
PPFIA1-209ENST00000527612 TTBK2Q6IQ55 1244 aa8.03□□□□□ -1.12
PPFIA1-209ENST00000527612 BTNL9Q6UXG8 535 aa8.03□□□□□ -1.12
PPFIA1-209ENST00000527612 ARMCX2Q7L311 632 aa8.03□□□□□ -1.12
PPFIA1-209ENST00000527612 DSCC1Q9BVC3 393 aa8.03□□□□□ -1.12
PPFIA1-209ENST00000527612 SENP6Q9GZR1 1112 aaPredicted RBP8.03□□□□□ -1.12
PPFIA1-209ENST00000527612 FBXO40Q9UH90 709 aa8.03□□□□□ -1.12
PPFIA1-209ENST00000527612 PHF24Q9UPV7 400 aa8.03□□□□□ -1.12
PPFIA1-209ENST00000527612 DDX49Q9Y6V7 483 aaKnown RBP8.03□□□□□ -1.12
PPFIA1-209ENST00000527612 FRMPD2Q68DX3 1309 aaPredicted RBP8.03□□□□□ -1.12
PPFIA1-209ENST00000527612 A0A1W2PQ45 241 aaPredicted RBP8.02□□□□□ -1.13
PPFIA1-209ENST00000527612 A0A1W2PQY0 241 aa8.02□□□□□ -1.13
PPFIA1-209ENST00000527612 SOWAHBA6NEL2 793 aa8.02□□□□□ -1.13
PPFIA1-209ENST00000527612 HIP1O00291 1037 aa8.02□□□□□ -1.13
PPFIA1-209ENST00000527612 NFIBO00712 420 aa8.02□□□□□ -1.13
PPFIA1-209ENST00000527612 CTAGE5O15320 804 aa8.02□□□□□ -1.13
PPFIA1-209ENST00000527612 ICAM1P05362 532 aa8.02□□□□□ -1.13
PPFIA1-209ENST00000527612 CST5P28325 142 aaPredicted RBP8.02□□□□□ -1.13
PPFIA1-209ENST00000527612 SLC16A2P36021 539 aa8.02□□□□□ -1.13
PPFIA1-209ENST00000527612 MFAP1P55081 439 aaKnown RBP8.02□□□□□ -1.13
PPFIA1-209ENST00000527612 IRX5P78411 483 aaPredicted RBP8.02□□□□□ -1.13
PPFIA1-209ENST00000527612 ZNF543Q08ER8 600 aa8.02□□□□□ -1.13
PPFIA1-209ENST00000527612 IKQ13123 557 aaPredicted RBP8.02□□□□□ -1.13
PPFIA1-209ENST00000527612 TRIM60Q495X7 471 aa8.02□□□□□ -1.13
PPFIA1-209ENST00000527612 C1orf53Q5VUE5 145 aa8.02□□□□□ -1.13
PPFIA1-209ENST00000527612 CCSAPQ6IQ19 270 aaPredicted RBP8.02□□□□□ -1.13
PPFIA1-209ENST00000527612 CCDC174Q6PII3 467 aa8.02□□□□□ -1.13
PPFIA1-209ENST00000527612 MFSD6Q6ZSS7 791 aa8.02□□□□□ -1.13
PPFIA1-209ENST00000527612 CCDC144CPQ8IYA2 1237 aa8.02□□□□□ -1.13
PPFIA1-209ENST00000527612 ANKRD35Q8N283 1001 aa8.02□□□□□ -1.13
PPFIA1-209ENST00000527612 ENAHQ8N8S7 591 aaPredicted RBP8.02□□□□□ -1.13
PPFIA1-209ENST00000527612 ARRDC4Q8NCT1 418 aa8.02□□□□□ -1.13
PPFIA1-209ENST00000527612 CHURC1Q8WUH1 139 aa8.02□□□□□ -1.13
PPFIA1-209ENST00000527612 LRCH3Q96II8 777 aa8.02□□□□□ -1.13
PPFIA1-209ENST00000527612 UPF3AQ9H1J1 476 aaKnown RBP8.02□□□□□ -1.13
PPFIA1-209ENST00000527612 PDLIM7Q9NR12 457 aa8.02□□□□□ -1.13
PPFIA1-209ENST00000527612 TOMM22Q9NS69 142 aa8.02□□□□□ -1.13
PPFIA1-209ENST00000527612 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.02□□□□□ -1.13
PPFIA1-209ENST00000527612 CYP39A1Q9NYL5 469 aa8.02□□□□□ -1.13
PPFIA1-209ENST00000527612 ZHX1Q9UKY1 873 aaPredicted RBP8.02□□□□□ -1.13
PPFIA1-209ENST00000527612 ISY1Q9ULR0 285 aaKnown RBP8.02□□□□□ -1.13
PPFIA1-209ENST00000527612 MTMR7Q9Y216 660 aa8.02□□□□□ -1.13
PPFIA1-209ENST00000527612 CNPY2Q9Y2B0 182 aa8.02□□□□□ -1.13
PPFIA1-209ENST00000527612 TAF6LQ9Y6J9 622 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms