RNA–Protein interactions for RNA: ENST00000527611.1

DHDDS-219, Transcript of dehydrodolichyl diphosphate synthase subunit, human

TSL 3

Gene DHDDS, Length 297 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DHDDS-219	ENST00000527611	NUP88	Q99567	741 aa	Predicted RBP	13.75	□□□□□ -0.21
DHDDS-219	ENST00000527611	LRFN3	Q9BTN0	628 aa		13.75	□□□□□ -0.21
DHDDS-219	ENST00000527611	TEX13B	Q9BXU2	312 aa		13.75	□□□□□ -0.21
DHDDS-219	ENST00000527611	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.75	□□□□□ -0.21
DHDDS-219	ENST00000527611	EPHX3	Q9H6B9	360 aa		13.75	□□□□□ -0.21
DHDDS-219	ENST00000527611	KANSL2	Q9H9L4	492 aa		13.75	□□□□□ -0.21
DHDDS-219	ENST00000527611	SPDYE4	A6NLX3	237 aa		13.74	□□□□□ -0.21
DHDDS-219	ENST00000527611	RAD21	O60216	631 aa		13.74	□□□□□ -0.21
DHDDS-219	ENST00000527611	NKX3-2	P78367	333 aa		13.74	□□□□□ -0.21
DHDDS-219	ENST00000527611	C16orf86	Q6ZW13	317 aa		13.74	□□□□□ -0.21
DHDDS-219	ENST00000527611	SLC43A3	Q8NBI5	491 aa		13.74	□□□□□ -0.21
DHDDS-219	ENST00000527611	VWCE	Q96DN2	955 aa		13.74	□□□□□ -0.21
DHDDS-219	ENST00000527611	SLF1	Q9BQI6	1058 aa		13.74	□□□□□ -0.21
DHDDS-219	ENST00000527611	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
DHDDS-219	ENST00000527611	KATNBL1	Q9H079	304 aa		13.74	□□□□□ -0.21
DHDDS-219	ENST00000527611	MTIF3	Q9H2K0	278 aa	Known RBP	13.74	□□□□□ -0.21
DHDDS-219	ENST00000527611	ABHD16B	Q9H3Z7	469 aa		13.74	□□□□□ -0.21
DHDDS-219	ENST00000527611	SPC25	Q9HBM1	224 aa		13.74	□□□□□ -0.21
DHDDS-219	ENST00000527611	GOPC	Q9HD26	462 aa		13.74	□□□□□ -0.21
DHDDS-219	ENST00000527611	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.74	□□□□□ -0.21
DHDDS-219	ENST00000527611	GOLIM4	O00461	696 aa		13.73	□□□□□ -0.21
DHDDS-219	ENST00000527611	ERC2	O15083	957 aa		13.73	□□□□□ -0.21
DHDDS-219	ENST00000527611	MBD4	O95243	580 aa		13.73	□□□□□ -0.21
DHDDS-219	ENST00000527611	CCL23	P55773	120 aa		13.73	□□□□□ -0.21
DHDDS-219	ENST00000527611	BEX3	Q00994	111 aa		13.73	□□□□□ -0.21
DHDDS-219	ENST00000527611	PPP2R2D	Q66LE6	453 aa		13.73	□□□□□ -0.21
DHDDS-219	ENST00000527611	HIPK3	Q9H422	1215 aa		13.73	□□□□□ -0.21
DHDDS-219	ENST00000527611	ATP8A2	Q9NTI2	1148 aa		13.73	□□□□□ -0.21
DHDDS-219	ENST00000527611	EXOC6B	Q9Y2D4	811 aa		13.73	□□□□□ -0.21
DHDDS-219	ENST00000527611	PRRC2B	Q5JSZ5	2229 aa	Known RBP	13.72	□□□□□ -0.21
DHDDS-219	ENST00000527611	GREB1L	Q9C091	1923 aa	Predicted RBP	13.72	□□□□□ -0.21
DHDDS-219	ENST00000527611	ASTN1	O14525	1302 aa		13.72	□□□□□ -0.21
DHDDS-219	ENST00000527611	GRIN2D	O15399	1336 aa		13.72	□□□□□ -0.21
DHDDS-219	ENST00000527611	USP17L12	C9JPN9	530 aa		13.72	□□□□□ -0.21
DHDDS-219	ENST00000527611	USP17L21	D6R901	530 aa		13.72	□□□□□ -0.21
DHDDS-219	ENST00000527611	RFXAP	O00287	272 aa		13.72	□□□□□ -0.21
DHDDS-219	ENST00000527611	ATP2A1	O14983	1001 aa		13.72	□□□□□ -0.21
DHDDS-219	ENST00000527611	SLC4A3	P48751	1232 aa		13.72	□□□□□ -0.21
DHDDS-219	ENST00000527611	AAK1	Q2M2I8	961 aa		13.72	□□□□□ -0.21
DHDDS-219	ENST00000527611	ZKSCAN2	Q63HK3	967 aa		13.72	□□□□□ -0.21
DHDDS-219	ENST00000527611	CXCL17	Q6UXB2	119 aa		13.72	□□□□□ -0.21
DHDDS-219	ENST00000527611	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
DHDDS-219	ENST00000527611	ARMCX2	Q7L311	632 aa		13.72	□□□□□ -0.21
DHDDS-219	ENST00000527611	CPXCR1	Q8N123	301 aa		13.72	□□□□□ -0.21
DHDDS-219	ENST00000527611	DNAJC2	Q99543	621 aa	Known RBP	13.72	□□□□□ -0.21
DHDDS-219	ENST00000527611	NOC4L	Q9BVI4	516 aa	Known RBP	13.72	□□□□□ -0.21
DHDDS-219	ENST00000527611	WNT8A	Q9H1J5	351 aa		13.72	□□□□□ -0.21
DHDDS-219	ENST00000527611	IL1RAPL2	Q9NP60	686 aa		13.72	□□□□□ -0.21
DHDDS-219	ENST00000527611	PCDHA11	Q9Y5I1	949 aa		13.72	□□□□□ -0.21
DHDDS-219	ENST00000527611	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	13.71	□□□□□ -0.21
DHDDS-219	ENST00000527611	CHGB	P05060	677 aa		13.71	□□□□□ -0.21
DHDDS-219	ENST00000527611	POU3F3	P20264	500 aa	Predicted RBP	13.71	□□□□□ -0.21
DHDDS-219	ENST00000527611	PTGS1	P23219	599 aa		13.71	□□□□□ -0.21
DHDDS-219	ENST00000527611	SKIV2L	Q15477	1246 aa	Known RBP	13.71	□□□□□ -0.21
DHDDS-219	ENST00000527611	CCDC144CP	Q8IYA2	1237 aa		13.71	□□□□□ -0.21
DHDDS-219	ENST00000527611	TRPV6	Q9H1D0	765 aa		13.71	□□□□□ -0.21
DHDDS-219	ENST00000527611	RAVER2	Q9HCJ3	691 aa	Known RBP	13.71	□□□□□ -0.21
DHDDS-219	ENST00000527611	HCN4	Q9Y3Q4	1203 aa		13.71	□□□□□ -0.21
DHDDS-219	ENST00000527611	MTCH2	Q9Y6C9	303 aa		13.71	□□□□□ -0.21
DHDDS-219	ENST00000527611	SLC4A7	Q9Y6M7	1214 aa		13.71	□□□□□ -0.21
DHDDS-219	ENST00000527611	ZBED9	Q6R2W3	1325 aa		13.7	□□□□□ -0.22
DHDDS-219	ENST00000527611	NDUFB10	O96000	172 aa		13.7	□□□□□ -0.22
DHDDS-219	ENST00000527611	ADD2	P35612	726 aa		13.7	□□□□□ -0.22
DHDDS-219	ENST00000527611	ITGA7	Q13683	1181 aa		13.7	□□□□□ -0.22
DHDDS-219	ENST00000527611	CEP85	Q6P2H3	762 aa		13.7	□□□□□ -0.22
DHDDS-219	ENST00000527611	ERC1	Q8IUD2	1116 aa		13.7	□□□□□ -0.22
DHDDS-219	ENST00000527611	ANKRD35	Q8N283	1001 aa		13.7	□□□□□ -0.22
DHDDS-219	ENST00000527611	PRPF38A	Q8NAV1	312 aa	Known RBP	13.7	□□□□□ -0.22
DHDDS-219	ENST00000527611	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
DHDDS-219	ENST00000527611	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.7	□□□□□ -0.22	1e-7	■■□□□ 13.4
DHDDS-219	ENST00000527611	GNE	Q9Y223	722 aa	Known RBP	13.7	□□□□□ -0.22
DHDDS-219	ENST00000527611	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.7	□□□□□ -0.22
DHDDS-219	ENST00000527611	LRRC37A2	A6NM11	1700 aa		13.7	□□□□□ -0.22
DHDDS-219	ENST00000527611	TRANK1	O15050	2925 aa		13.69	□□□□□ -0.22
DHDDS-219	ENST00000527611	EPOP	A6NHQ4	379 aa		13.69	□□□□□ -0.22
DHDDS-219	ENST00000527611		F5H6K3	240 aa		13.69	□□□□□ -0.22
DHDDS-219	ENST00000527611	TLL1	O43897	1013 aa		13.69	□□□□□ -0.22
DHDDS-219	ENST00000527611	B4GALT4	O60513	344 aa		13.69	□□□□□ -0.22
DHDDS-219	ENST00000527611	RLBP1	P12271	317 aa		13.69	□□□□□ -0.22
DHDDS-219	ENST00000527611	TNFAIP2	Q03169	654 aa		13.69	□□□□□ -0.22
DHDDS-219	ENST00000527611	KLRC3	Q07444	240 aa		13.69	□□□□□ -0.22
DHDDS-219	ENST00000527611	TMEM31	Q5JXX7	168 aa		13.69	□□□□□ -0.22
DHDDS-219	ENST00000527611	KRT40	Q6A162	431 aa		13.69	□□□□□ -0.22
DHDDS-219	ENST00000527611	CTR9	Q6PD62	1173 aa		13.69	□□□□□ -0.22
DHDDS-219	ENST00000527611	RHPN1	Q8TCX5	695 aa		13.69	□□□□□ -0.22
DHDDS-219	ENST00000527611	SCLY	Q96I15	445 aa		13.69	□□□□□ -0.22
DHDDS-219	ENST00000527611	AGBL1	Q96MI9	1066 aa		13.69	□□□□□ -0.22
DHDDS-219	ENST00000527611	CERS4	Q9HA82	394 aa		13.69	□□□□□ -0.22
DHDDS-219	ENST00000527611	SLC38A10	Q9HBR0	1119 aa		13.69	□□□□□ -0.22
DHDDS-219	ENST00000527611	C11orf16	Q9NQ32	467 aa		13.69	□□□□□ -0.22
DHDDS-219	ENST00000527611	ZBBX	A8MT70	800 aa		13.68	□□□□□ -0.22
DHDDS-219	ENST00000527611	ZBED4	O75132	1171 aa		13.68	□□□□□ -0.22
DHDDS-219	ENST00000527611	CABYR	O75952	493 aa		13.68	□□□□□ -0.22
DHDDS-219	ENST00000527611	CA3	P07451	260 aa		13.68	□□□□□ -0.22
DHDDS-219	ENST00000527611	ATP2A2	P16615	1042 aa	Known RBP	13.68	□□□□□ -0.22
DHDDS-219	ENST00000527611	PSMC6	P62333	389 aa		13.68	□□□□□ -0.22
DHDDS-219	ENST00000527611	CNTN2	Q02246	1040 aa		13.68	□□□□□ -0.22
DHDDS-219	ENST00000527611	TTLL4	Q14679	1199 aa		13.68	□□□□□ -0.22
DHDDS-219	ENST00000527611	TLK2	Q86UE8	772 aa		13.68	□□□□□ -0.22
DHDDS-219	ENST00000527611	ITPRIP	Q8IWB1	547 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms