RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, human

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLNS1A-209	ENST00000527299	FBLN1	P23142	703 aa		4.99	□□□□□ -1.61
CLNS1A-209	ENST00000527299	ZNF200	P98182	395 aa	Predicted RBP	4.99	□□□□□ -1.61
CLNS1A-209	ENST00000527299	NR1I3	Q14994	352 aa		4.99	□□□□□ -1.61
CLNS1A-209	ENST00000527299	ZC3H14	Q6PJT7	736 aa	Known RBP	4.99	□□□□□ -1.61
CLNS1A-209	ENST00000527299	LSR	Q86X29	649 aa	Predicted RBP	4.99	□□□□□ -1.61
CLNS1A-209	ENST00000527299	ADGRG2	Q8IZP9	1017 aa		4.99	□□□□□ -1.61
CLNS1A-209	ENST00000527299	FNIP1	Q8TF40	1166 aa		4.99	□□□□□ -1.61
CLNS1A-209	ENST00000527299	NAP1L5	Q96NT1	182 aa	Predicted RBP	4.99	□□□□□ -1.61
CLNS1A-209	ENST00000527299	USP40	Q9NVE5	1235 aa		4.99	□□□□□ -1.61
CLNS1A-209	ENST00000527299	BCCIP	Q9P287	314 aa	Known RBP eCLIP	4.99	□□□□□ -1.61
CLNS1A-209	ENST00000527299	SUSD2	Q9UGT4	822 aa		4.99	□□□□□ -1.61
CLNS1A-209	ENST00000527299	MINPP1	Q9UNW1	487 aa		4.99	□□□□□ -1.61
CLNS1A-209	ENST00000527299		A0A1B0GTL3	188 aa		4.98	□□□□□ -1.61
CLNS1A-209	ENST00000527299	SH3D21	A4FU49	640 aa		4.98	□□□□□ -1.61
CLNS1A-209	ENST00000527299	RRP9	O43818	475 aa	Known RBP	4.98	□□□□□ -1.61
CLNS1A-209	ENST00000527299	PLA2G1B	P04054	148 aa	Known RBP	4.98	□□□□□ -1.61
CLNS1A-209	ENST00000527299	HSP90B1	P14625	803 aa	Known RBP	4.98	□□□□□ -1.61
CLNS1A-209	ENST00000527299	HTRA3	P83110	453 aa		4.98	□□□□□ -1.61
CLNS1A-209	ENST00000527299	TARBP2	Q15633	366 aa	Known RBP	4.98	□□□□□ -1.61
CLNS1A-209	ENST00000527299	SAPCD2	Q86UD0	394 aa		4.98	□□□□□ -1.61
CLNS1A-209	ENST00000527299	EAF1	Q96JC9	268 aa	Predicted RBP	4.98	□□□□□ -1.61
CLNS1A-209	ENST00000527299	RHOV	Q96L33	236 aa		4.98	□□□□□ -1.61
CLNS1A-209	ENST00000527299	DUSP9	Q99956	384 aa	Known RBP	4.98	□□□□□ -1.61
CLNS1A-209	ENST00000527299	SPATA25	Q9BR10	227 aa		4.98	□□□□□ -1.61
CLNS1A-209	ENST00000527299	PRDM14	Q9GZV8	571 aa		4.98	□□□□□ -1.61
CLNS1A-209	ENST00000527299	DUSP10	Q9Y6W6	482 aa		4.98	□□□□□ -1.61
CLNS1A-209	ENST00000527299	WASHC2C	Q9Y4E1	1318 aa		4.97	□□□□□ -1.61
CLNS1A-209	ENST00000527299	USP31	Q70CQ4	1352 aa		4.97	□□□□□ -1.61
CLNS1A-209	ENST00000527299	LOC105371045	A0A1W2PR82	267 aa		4.97	□□□□□ -1.61
CLNS1A-209	ENST00000527299	C1QTNF3-AMACR	E9PGA6	284 aa		4.97	□□□□□ -1.61
CLNS1A-209	ENST00000527299		F6X3S4	739 aa		4.97	□□□□□ -1.61
CLNS1A-209	ENST00000527299	ZNF205	O95201	554 aa		4.97	□□□□□ -1.61
CLNS1A-209	ENST00000527299	BMP8B	P34820	402 aa		4.97	□□□□□ -1.61
CLNS1A-209	ENST00000527299	FOXO4	P98177	505 aa		4.97	□□□□□ -1.61
CLNS1A-209	ENST00000527299	MPP2	Q14168	576 aa		4.97	□□□□□ -1.61
CLNS1A-209	ENST00000527299	ARSH	Q5FYA8	562 aa		4.97	□□□□□ -1.61
CLNS1A-209	ENST00000527299	REC114	Q7Z4M0	266 aa		4.97	□□□□□ -1.61
CLNS1A-209	ENST00000527299	C14orf37	Q86TY3	774 aa		4.97	□□□□□ -1.61
CLNS1A-209	ENST00000527299	DHX37	Q8IY37	1157 aa	Known RBP	4.97	□□□□□ -1.61
CLNS1A-209	ENST00000527299	SLC16A11	Q8NCK7	471 aa		4.97	□□□□□ -1.61
CLNS1A-209	ENST00000527299	TMEM52	Q8NDY8	209 aa		4.97	□□□□□ -1.61
CLNS1A-209	ENST00000527299	IPO4	Q8TEX9	1081 aa	Known RBP	4.97	□□□□□ -1.61
CLNS1A-209	ENST00000527299	ZNF526	Q8TF50	670 aa	Predicted RBP	4.97	□□□□□ -1.61
CLNS1A-209	ENST00000527299	JMJD8	Q96S16	334 aa		4.97	□□□□□ -1.61
CLNS1A-209	ENST00000527299	RBM15	Q96T37	977 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
CLNS1A-209	ENST00000527299	KRTAP3-1	Q9BYR8	98 aa		4.97	□□□□□ -1.61
CLNS1A-209	ENST00000527299	CHST7	Q9NS84	486 aa		4.97	□□□□□ -1.61
CLNS1A-209	ENST00000527299	IMPACT	Q9P2X3	320 aa		4.97	□□□□□ -1.61
CLNS1A-209	ENST00000527299	SRRD	Q9UH36	339 aa		4.97	□□□□□ -1.61
CLNS1A-209	ENST00000527299	NAP1L2	Q9ULW6	460 aa	Predicted RBP	4.97	□□□□□ -1.61
CLNS1A-209	ENST00000527299	NOBOX	O60393	691 aa		4.96	□□□□□ -1.62
CLNS1A-209	ENST00000527299	ITGB3	P05106	788 aa		4.96	□□□□□ -1.62
CLNS1A-209	ENST00000527299	ATF2	P15336	505 aa		4.96	□□□□□ -1.62
CLNS1A-209	ENST00000527299	RAG1	P15918	1043 aa		4.96	□□□□□ -1.62
CLNS1A-209	ENST00000527299	CTSK	P43235	329 aa		4.96	□□□□□ -1.62
CLNS1A-209	ENST00000527299	MVK	Q03426	396 aa		4.96	□□□□□ -1.62
CLNS1A-209	ENST00000527299	DLX2	Q07687	328 aa	Predicted RBP	4.96	□□□□□ -1.62
CLNS1A-209	ENST00000527299	RAD51AP2	Q09MP3	1159 aa		4.96	□□□□□ -1.62
CLNS1A-209	ENST00000527299	CDADC1	Q9BWV3	514 aa		4.96	□□□□□ -1.62
CLNS1A-209	ENST00000527299	C1QTNF3	Q9BXJ4	246 aa		4.96	□□□□□ -1.62
CLNS1A-209	ENST00000527299	SMPD4	Q9NXE4	827 aa		4.96	□□□□□ -1.62
CLNS1A-209	ENST00000527299	WASHC2A	Q641Q2	1341 aa		4.96	□□□□□ -1.62
CLNS1A-209	ENST00000527299	SRGAP3	O43295	1099 aa		4.95	□□□□□ -1.62
CLNS1A-209	ENST00000527299	VAV1	P15498	845 aa		4.95	□□□□□ -1.62
CLNS1A-209	ENST00000527299	MLEC	Q14165	292 aa		4.95	□□□□□ -1.62
CLNS1A-209	ENST00000527299	TMEM74	Q96NL1	305 aa		4.95	□□□□□ -1.62
CLNS1A-209	ENST00000527299	RSRP1	Q9BUV0	290 aa		4.95	□□□□□ -1.62
CLNS1A-209	ENST00000527299	LNPK	Q9C0E8	428 aa		4.95	□□□□□ -1.62
CLNS1A-209	ENST00000527299	AP5S1	Q9NUS5	200 aa		4.95	□□□□□ -1.62
CLNS1A-209	ENST00000527299	GMIP	Q9P107	970 aa		4.95	□□□□□ -1.62
CLNS1A-209	ENST00000527299	PLA2G2D	Q9UNK4	145 aa		4.95	□□□□□ -1.62
CLNS1A-209	ENST00000527299	HCFC2	Q9Y5Z7	792 aa		4.95	□□□□□ -1.62
CLNS1A-209	ENST00000527299	PMF1-BGLAP	U3KQ54	211 aa		4.95	□□□□□ -1.62
CLNS1A-209	ENST00000527299	CENPJ	Q9HC77	1338 aa	Predicted RBP	4.95	□□□□□ -1.62
CLNS1A-209	ENST00000527299	CYBB	P04839	570 aa		4.94	□□□□□ -1.62
CLNS1A-209	ENST00000527299	DBH	P09172	617 aa		4.94	□□□□□ -1.62
CLNS1A-209	ENST00000527299	CTSH	P09668	335 aa		4.94	□□□□□ -1.62
CLNS1A-209	ENST00000527299	CNR2	P34972	360 aa		4.94	□□□□□ -1.62
CLNS1A-209	ENST00000527299	CALD1	Q05682	793 aa	Known RBP	4.94	□□□□□ -1.62
CLNS1A-209	ENST00000527299	KRTAP1-1	Q07627	177 aa		4.94	□□□□□ -1.62
CLNS1A-209	ENST00000527299	CDCP2	Q5VXM1	449 aa		4.94	□□□□□ -1.62
CLNS1A-209	ENST00000527299	CPZ	Q66K79	652 aa		4.94	□□□□□ -1.62
CLNS1A-209	ENST00000527299	PAQR3	Q6TCH7	311 aa		4.94	□□□□□ -1.62
CLNS1A-209	ENST00000527299	FBXO27	Q8NI29	283 aa		4.94	□□□□□ -1.62
CLNS1A-209	ENST00000527299	DDX1	Q92499	740 aa	Known RBP	4.94	□□□□□ -1.62
CLNS1A-209	ENST00000527299	SORCS2	Q96PQ0	1159 aa		4.94	□□□□□ -1.62
CLNS1A-209	ENST00000527299	RNF38	Q9H0F5	515 aa		4.94	□□□□□ -1.62
CLNS1A-209	ENST00000527299	OVOL3	O00110	214 aa		4.93	□□□□□ -1.62
CLNS1A-209	ENST00000527299	CLEC3A	O75596	197 aa		4.93	□□□□□ -1.62
CLNS1A-209	ENST00000527299	ATE1	O95260	518 aa		4.93	□□□□□ -1.62
CLNS1A-209	ENST00000527299	FSHB	P01225	129 aa		4.93	□□□□□ -1.62
CLNS1A-209	ENST00000527299	CDK11B	P21127	795 aa	Known RBP	4.93	□□□□□ -1.62
CLNS1A-209	ENST00000527299	GART	P22102	1010 aa		4.93	□□□□□ -1.62
CLNS1A-209	ENST00000527299	POLR2B	P30876	1174 aa	Known RBP	4.93	□□□□□ -1.62
CLNS1A-209	ENST00000527299	GBP2	P32456	591 aa	Predicted RBP	4.93	□□□□□ -1.62
CLNS1A-209	ENST00000527299	CCNF	P41002	786 aa		4.93	□□□□□ -1.62
CLNS1A-209	ENST00000527299	FAM160A1	Q05DH4	1040 aa		4.93	□□□□□ -1.62
CLNS1A-209	ENST00000527299	RTP2	Q5QGT7	225 aa		4.93	□□□□□ -1.62
CLNS1A-209	ENST00000527299	RELL1	Q8IUW5	271 aa		4.93	□□□□□ -1.62
CLNS1A-209	ENST00000527299	TEX2	Q8IWB9	1127 aa		4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms