RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 PPP1R18Q6NYC8 613 aa18.45■□□□□ 0.54
SNRNP35-204ENST00000527158 CEP57L1Q8IYX8 460 aa18.45■□□□□ 0.54
SNRNP35-204ENST00000527158 CCDC34Q96HJ3 373 aa18.45■□□□□ 0.54
SNRNP35-204ENST00000527158 MYH4Q9Y623 1939 aa18.44■□□□□ 0.54
SNRNP35-204ENST00000527158 UQCRHLA0A096LP55 91 aa18.44■□□□□ 0.54
SNRNP35-204ENST00000527158 VWA3AA6NCI4 1184 aa18.44■□□□□ 0.54
SNRNP35-204ENST00000527158 F5H6K3 240 aa18.44■□□□□ 0.54
SNRNP35-204ENST00000527158 ZBTB5O15062 677 aa18.44■□□□□ 0.54
SNRNP35-204ENST00000527158 TBC1D12O60347 775 aa18.44■□□□□ 0.54
SNRNP35-204ENST00000527158 UQCRHP07919 91 aa18.44■□□□□ 0.54
SNRNP35-204ENST00000527158 KLRC3Q07444 240 aa18.44■□□□□ 0.54
SNRNP35-204ENST00000527158 NBPF9Q3BBW0 867 aa18.44■□□□□ 0.54
SNRNP35-204ENST00000527158 REXO1Q8N1G1 1221 aaKnown RBP18.44■□□□□ 0.54
SNRNP35-204ENST00000527158 COA7Q96BR5 231 aa18.44■□□□□ 0.54
SNRNP35-204ENST00000527158 TMEM39BQ9GZU3 492 aa18.44■□□□□ 0.54
SNRNP35-204ENST00000527158 SYNPO2Q9UMS6 1093 aa18.44■□□□□ 0.54
SNRNP35-204ENST00000527158 USP17L10C9JJH3 530 aa18.44■□□□□ 0.54
SNRNP35-204ENST00000527158 ADCY7P51828 1080 aa18.44■□□□□ 0.54
SNRNP35-204ENST00000527158 ZNF280AP59817 542 aaPredicted RBP18.44■□□□□ 0.54
SNRNP35-204ENST00000527158 KANK3Q6NY19 840 aa18.44■□□□□ 0.54
SNRNP35-204ENST00000527158 GMCL1Q96IK5 515 aa18.44■□□□□ 0.54
SNRNP35-204ENST00000527158 GOLGA6L19H0YKK7 550 aa18.43■□□□□ 0.54
SNRNP35-204ENST00000527158 RRP1BQ14684 758 aaKnown RBP18.43■□□□□ 0.54
SNRNP35-204ENST00000527158 C11orf57Q6ZUT1 292 aaPredicted RBP18.43■□□□□ 0.54
SNRNP35-204ENST00000527158 MTMR8Q96EF0 704 aa18.43■□□□□ 0.54
SNRNP35-204ENST00000527158 ARHGEF10LQ9HCE6 1279 aa18.43■□□□□ 0.54
SNRNP35-204ENST00000527158 JAG1P78504 1218 aa18.42■□□□□ 0.54
SNRNP35-204ENST00000527158 RASSF7Q02833 373 aa18.42■□□□□ 0.54
SNRNP35-204ENST00000527158 BECN2A8MW95 431 aa18.42■□□□□ 0.54
SNRNP35-204ENST00000527158 LAD1O00515 517 aa18.42■□□□□ 0.54
SNRNP35-204ENST00000527158 NLRP12P59046 1061 aa18.42■□□□□ 0.54
SNRNP35-204ENST00000527158 USP49Q70CQ1 688 aa18.42■□□□□ 0.54
SNRNP35-204ENST00000527158 PDILTQ8N807 584 aa18.42■□□□□ 0.54
SNRNP35-204ENST00000527158 DPF2Q92785 391 aa18.42■□□□□ 0.54
SNRNP35-204ENST00000527158 SYMPKQ92797 1274 aaKnown RBP18.42■□□□□ 0.54
SNRNP35-204ENST00000527158 EPSTI1Q96J88 318 aa18.42■□□□□ 0.54
SNRNP35-204ENST00000527158 BIN2Q9UBW5 565 aaPredicted RBP18.42■□□□□ 0.54
SNRNP35-204ENST00000527158 SERTAD1Q9UHV2 236 aa18.42■□□□□ 0.54
SNRNP35-204ENST00000527158 TUBE1Q9UJT0 475 aa18.42■□□□□ 0.54
SNRNP35-204ENST00000527158 FZD9O00144 591 aa18.41■□□□□ 0.54
SNRNP35-204ENST00000527158 NDUFB10O96000 172 aa18.41■□□□□ 0.54
SNRNP35-204ENST00000527158 PNOCQ13519 176 aa18.41■□□□□ 0.54
SNRNP35-204ENST00000527158 TNFAIP1Q13829 316 aa18.41■□□□□ 0.54
SNRNP35-204ENST00000527158 C4orf32Q8N8J7 132 aa18.41■□□□□ 0.54
SNRNP35-204ENST00000527158 NLGN2Q8NFZ4 835 aa18.41■□□□□ 0.54
SNRNP35-204ENST00000527158 PYM1Q9BRP8 204 aaKnown RBP18.41■□□□□ 0.54
SNRNP35-204ENST00000527158 SPTLC3Q9NUV7 552 aa18.41■□□□□ 0.54
SNRNP35-204ENST00000527158 GJA3Q9Y6H8 435 aa18.41■□□□□ 0.54
SNRNP35-204ENST00000527158 SHTN1A0MZ66 631 aa18.41■□□□□ 0.54
SNRNP35-204ENST00000527158 BIN1O00499 593 aa18.41■□□□□ 0.54
SNRNP35-204ENST00000527158 LONP1P36776 959 aaKnown RBP18.41■□□□□ 0.54
SNRNP35-204ENST00000527158 MRPL12P52815 198 aaKnown RBP18.41■□□□□ 0.54
SNRNP35-204ENST00000527158 IQCB1Q15051 598 aa18.41■□□□□ 0.54
SNRNP35-204ENST00000527158 JAKMIP3Q5VZ66 844 aa18.41■□□□□ 0.54
SNRNP35-204ENST00000527158 DTHD1Q6ZMT9 781 aa18.41■□□□□ 0.54
SNRNP35-204ENST00000527158 NEK8Q86SG6 692 aa18.41■□□□□ 0.54
SNRNP35-204ENST00000527158 RIC8AQ9NPQ8 531 aa18.41■□□□□ 0.54
SNRNP35-204ENST00000527158 A0A087WWV3 80 aa18.4■□□□□ 0.54
SNRNP35-204ENST00000527158 BMP3P12645 472 aa18.4■□□□□ 0.54
SNRNP35-204ENST00000527158 GMPSP49915 693 aaPredicted RBP18.4■□□□□ 0.54
SNRNP35-204ENST00000527158 IKQ13123 557 aaPredicted RBP18.4■□□□□ 0.54
SNRNP35-204ENST00000527158 NOLC1Q14978 699 aaKnown RBP eCLIP18.4■□□□□ 0.54
SNRNP35-204ENST00000527158 POSTNQ15063 836 aa18.4■□□□□ 0.54
SNRNP35-204ENST00000527158 LETM2Q2VYF4 491 aa18.4■□□□□ 0.54
SNRNP35-204ENST00000527158 MIGA2Q7L4E1 593 aa18.4■□□□□ 0.54
SNRNP35-204ENST00000527158 CUL5Q93034 780 aa18.4■□□□□ 0.54
SNRNP35-204ENST00000527158 ZBTB21Q9ULJ3 1066 aa18.4■□□□□ 0.54
SNRNP35-204ENST00000527158 CCNT1O60563 726 aaKnown RBP18.4■□□□□ 0.54
SNRNP35-204ENST00000527158 PPP1R11O60927 126 aaPredicted RBP18.4■□□□□ 0.54
SNRNP35-204ENST00000527158 MDM2Q00987 491 aaPredicted RBP18.4■□□□□ 0.54
SNRNP35-204ENST00000527158 DPCR1Q3MIW9 517 aa18.4■□□□□ 0.54
SNRNP35-204ENST00000527158 MICALL2Q8IY33 904 aa18.4■□□□□ 0.54
SNRNP35-204ENST00000527158 TBCKQ8TEA7 893 aa18.4■□□□□ 0.54
SNRNP35-204ENST00000527158 DHX58Q96C10 678 aa18.4■□□□□ 0.54
SNRNP35-204ENST00000527158 GLT8D2Q9H1C3 349 aa18.4■□□□□ 0.54
SNRNP35-204ENST00000527158 A0A1W2PRG0 241 aa18.39■□□□□ 0.53
SNRNP35-204ENST00000527158 ACTN4O43707 911 aaKnown RBP18.39■□□□□ 0.53
SNRNP35-204ENST00000527158 TXLNAP40222 546 aa18.39■□□□□ 0.53
SNRNP35-204ENST00000527158 ORC2Q13416 577 aaPredicted RBP18.39■□□□□ 0.53
SNRNP35-204ENST00000527158 RASA3Q14644 834 aa18.39■□□□□ 0.53
SNRNP35-204ENST00000527158 CDC37Q16543 378 aaPredicted RBP18.39■□□□□ 0.53
SNRNP35-204ENST00000527158 QRICH1Q2TAL8 776 aa18.39■□□□□ 0.53
SNRNP35-204ENST00000527158 BPIFA3Q9BQP9 254 aa18.39■□□□□ 0.53
SNRNP35-204ENST00000527158 GOPCQ9HD26 462 aa18.39■□□□□ 0.53
SNRNP35-204ENST00000527158 CNOT7Q9UIV1 285 aaKnown RBP18.39■□□□□ 0.53
SNRNP35-204ENST00000527158 PCDHA5Q9Y5H7 936 aa18.39■□□□□ 0.53
SNRNP35-204ENST00000527158 SLFN14P0C7P3 912 aa18.38■□□□□ 0.53
SNRNP35-204ENST00000527158 PRPHP41219 470 aa18.38■□□□□ 0.53
SNRNP35-204ENST00000527158 IL17AQ16552 155 aa18.38■□□□□ 0.53
SNRNP35-204ENST00000527158 DNTTIP2Q5QJE6 756 aaKnown RBP18.38■□□□□ 0.53
SNRNP35-204ENST00000527158 CDAN1Q8IWY9 1227 aa18.38■□□□□ 0.53
SNRNP35-204ENST00000527158 MYRIPQ8NFW9 859 aa18.38■□□□□ 0.53
SNRNP35-204ENST00000527158 NUP88Q99567 741 aaPredicted RBP18.38■□□□□ 0.53
SNRNP35-204ENST00000527158 PSTPIP2Q9H939 334 aa18.38■□□□□ 0.53
SNRNP35-204ENST00000527158 TMEM260Q9NX78 707 aa18.38■□□□□ 0.53
SNRNP35-204ENST00000527158 PGAP2Q9UHJ9 254 aa18.38■□□□□ 0.53
SNRNP35-204ENST00000527158 TMX2Q9Y320 296 aa18.38■□□□□ 0.53
SNRNP35-204ENST00000527158 TMEM232C9JQI7 657 aa18.38■□□□□ 0.53
SNRNP35-204ENST00000527158 CAP2P40123 477 aa18.38■□□□□ 0.53
SNRNP35-204ENST00000527158 MAP3K10Q02779 954 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms