RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 ARMCX2Q7L311 632 aa13.96□□□□□ -0.17
CAPN1-204ENST00000526468 GLT1D1Q96MS3 346 aa13.96□□□□□ -0.17
CAPN1-204ENST00000526468 TSEN34Q9BSV6 310 aaKnown RBP13.96□□□□□ -0.17
CAPN1-204ENST00000526468 SEMA6BQ9H3T3 888 aa13.96□□□□□ -0.17
CAPN1-204ENST00000526468 SLC38A10Q9HBR0 1119 aa13.96□□□□□ -0.17
CAPN1-204ENST00000526468 FBXO40Q9UH90 709 aa13.96□□□□□ -0.17
CAPN1-204ENST00000526468 FEM1BQ9UK73 627 aa13.96□□□□□ -0.17
CAPN1-204ENST00000526468 TCF20Q9UGU0 1960 aaKnown RBP13.96□□□□□ -0.18
CAPN1-204ENST00000526468 TMEM265A0A087WTH1 108 aa13.95□□□□□ -0.18
CAPN1-204ENST00000526468 ATP2A1O14983 1001 aa13.95□□□□□ -0.18
CAPN1-204ENST00000526468 ADCY6O43306 1168 aa13.95□□□□□ -0.18
CAPN1-204ENST00000526468 DUSP11O75319 330 aaKnown RBP13.95□□□□□ -0.18
CAPN1-204ENST00000526468 TSPY3P0CV98 308 aa13.95□□□□□ -0.18
CAPN1-204ENST00000526468 TSPY8P0CW00 308 aa13.95□□□□□ -0.18
CAPN1-204ENST00000526468 CST5P28325 142 aaPredicted RBP13.95□□□□□ -0.18
CAPN1-204ENST00000526468 KCNA10Q16322 511 aa13.95□□□□□ -0.18
CAPN1-204ENST00000526468 LRRFIP1Q32MZ4 808 aaKnown RBP13.95□□□□□ -0.18
CAPN1-204ENST00000526468 MAMDC4Q6UXC1 1216 aa13.95□□□□□ -0.18
CAPN1-204ENST00000526468 ANKRD33Q7Z3H0 272 aa13.95□□□□□ -0.18
CAPN1-204ENST00000526468 ZNF467Q7Z7K2 595 aaPredicted RBP13.95□□□□□ -0.18
CAPN1-204ENST00000526468 ZNF444Q8N0Y2 327 aaPredicted RBP13.95□□□□□ -0.18
CAPN1-204ENST00000526468 GMCL1P1Q8NEA9 526 aa13.95□□□□□ -0.18
CAPN1-204ENST00000526468 FGD4Q96M96 766 aa13.95□□□□□ -0.18
CAPN1-204ENST00000526468 FSD1Q9BTV5 496 aa13.95□□□□□ -0.18
CAPN1-204ENST00000526468 NACAP1Q9BZK3 213 aa13.95□□□□□ -0.18
CAPN1-204ENST00000526468 NAPBQ9H115 298 aa13.95□□□□□ -0.18
CAPN1-204ENST00000526468 SPC25Q9HBM1 224 aa13.95□□□□□ -0.18
CAPN1-204ENST00000526468 A0A0U1RQG5 324 aaPredicted RBP13.94□□□□□ -0.18
CAPN1-204ENST00000526468 SLC3A2P08195 630 aaKnown RBP13.94□□□□□ -0.18
CAPN1-204ENST00000526468 BMP3P12645 472 aa13.94□□□□□ -0.18
CAPN1-204ENST00000526468 DNAJB2P25686 324 aa13.94□□□□□ -0.18
CAPN1-204ENST00000526468 STAT2P52630 851 aa13.94□□□□□ -0.18
CAPN1-204ENST00000526468 OAZ1P54368 228 aa13.94□□□□□ -0.18
CAPN1-204ENST00000526468 IRX5P78411 483 aaPredicted RBP13.94□□□□□ -0.18
CAPN1-204ENST00000526468 PDE4BQ07343 736 aa13.94□□□□□ -0.18
CAPN1-204ENST00000526468 FAAP100Q0VG06 881 aa13.94□□□□□ -0.18
CAPN1-204ENST00000526468 ACVR2BQ13705 512 aa13.94□□□□□ -0.18
CAPN1-204ENST00000526468 CCDC144BQ3MJ40 725 aa13.94□□□□□ -0.18
CAPN1-204ENST00000526468 SLFN13Q68D06 897 aa13.94□□□□□ -0.18
CAPN1-204ENST00000526468 PCSK9Q8NBP7 692 aaKnown RBP13.94□□□□□ -0.18
CAPN1-204ENST00000526468 KLHDC9Q8NEP7 349 aa13.94□□□□□ -0.18
CAPN1-204ENST00000526468 CHST13Q8NET6 341 aa13.94□□□□□ -0.18
CAPN1-204ENST00000526468 CHMP4CQ96CF2 233 aa13.94□□□□□ -0.18
CAPN1-204ENST00000526468 TOX2Q96NM4 488 aa13.94□□□□□ -0.18
CAPN1-204ENST00000526468 ABHD16BQ9H3Z7 469 aa13.94□□□□□ -0.18
CAPN1-204ENST00000526468 ACAD9Q9H845 621 aa13.94□□□□□ -0.18
CAPN1-204ENST00000526468 SPTBN5Q9NRC6 3674 aaKnown RBP13.94□□□□□ -0.18
CAPN1-204ENST00000526468 RNF146Q9NTX7 359 aa13.94□□□□□ -0.18
CAPN1-204ENST00000526468 MTMR4Q9NYA4 1195 aa13.94□□□□□ -0.18
CAPN1-204ENST00000526468 TBX21Q9UL17 535 aa13.94□□□□□ -0.18
CAPN1-204ENST00000526468 SYNPO2Q9UMS6 1093 aa13.94□□□□□ -0.18
CAPN1-204ENST00000526468 TET1Q8NFU7 2136 aa13.93□□□□□ -0.18
CAPN1-204ENST00000526468 ASGR1P07306 291 aa13.93□□□□□ -0.18
CAPN1-204ENST00000526468 DEKP35659 375 aaKnown RBP13.93□□□□□ -0.18
CAPN1-204ENST00000526468 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.93□□□□□ -0.18
CAPN1-204ENST00000526468 CCDC144CPQ8IYA2 1237 aa13.93□□□□□ -0.18
CAPN1-204ENST00000526468 IFNL3Q8IZI9 196 aa13.93□□□□□ -0.18
CAPN1-204ENST00000526468 VTI1AQ96AJ9 217 aa13.93□□□□□ -0.18
CAPN1-204ENST00000526468 PPP1R12CQ9BZL4 782 aa13.93□□□□□ -0.18
CAPN1-204ENST00000526468 UPF3AQ9H1J1 476 aaKnown RBP13.93□□□□□ -0.18
CAPN1-204ENST00000526468 BRWD1Q9NSI6 2320 aa13.93□□□□□ -0.18
CAPN1-204ENST00000526468 ELP1O95163 1332 aa13.92□□□□□ -0.18
CAPN1-204ENST00000526468 TTC41PQ6P2S7 1318 aa13.92□□□□□ -0.18
CAPN1-204ENST00000526468 TMEM232C9JQI7 657 aa13.92□□□□□ -0.18
CAPN1-204ENST00000526468 ERC2O15083 957 aa13.92□□□□□ -0.18
CAPN1-204ENST00000526468 TLR3O15455 904 aaKnown RBP13.92□□□□□ -0.18
CAPN1-204ENST00000526468 TIMP1P01033 207 aa13.92□□□□□ -0.18
CAPN1-204ENST00000526468 SLC1A4P43007 532 aa13.92□□□□□ -0.18
CAPN1-204ENST00000526468 PPARAQ07869 468 aa13.92□□□□□ -0.18
CAPN1-204ENST00000526468 PPIGQ13427 754 aaKnown RBP eCLIP13.92□□□□□ -0.186e-8■■■□□ 14.9
CAPN1-204ENST00000526468 CCSAPQ6IQ19 270 aaPredicted RBP13.92□□□□□ -0.18
CAPN1-204ENST00000526468 CCDC174Q6PII3 467 aa13.92□□□□□ -0.18
CAPN1-204ENST00000526468 NOL8Q76FK4 1167 aaKnown RBP13.92□□□□□ -0.18
CAPN1-204ENST00000526468 RASGRP2Q7LDG7 609 aa13.92□□□□□ -0.18
CAPN1-204ENST00000526468 NEDD1Q8NHV4 660 aa13.92□□□□□ -0.18
CAPN1-204ENST00000526468 SEC62Q99442 399 aaKnown RBP13.92□□□□□ -0.18
CAPN1-204ENST00000526468 DCTPP1Q9H773 170 aa13.92□□□□□ -0.18
CAPN1-204ENST00000526468 PRRC2BQ5JSZ5 2229 aaKnown RBP13.91□□□□□ -0.18
CAPN1-204ENST00000526468 GJA9P57773 515 aa13.91□□□□□ -0.18
CAPN1-204ENST00000526468 BEX3Q00994 111 aa13.91□□□□□ -0.18
CAPN1-204ENST00000526468 CNTN2Q02246 1040 aa13.91□□□□□ -0.18
CAPN1-204ENST00000526468 GNASQ5JWF2 1037 aa13.91□□□□□ -0.18
CAPN1-204ENST00000526468 TLK2Q86UE8 772 aa13.91□□□□□ -0.18
CAPN1-204ENST00000526468 FAM160B2Q86V87 743 aa13.91□□□□□ -0.18
CAPN1-204ENST00000526468 MKL1Q969V6 931 aa13.91□□□□□ -0.18
CAPN1-204ENST00000526468 TIFAQ96CG3 184 aa13.91□□□□□ -0.18
CAPN1-204ENST00000526468 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.91□□□□□ -0.182e-6■■■□□ 15.4
CAPN1-204ENST00000526468 A1CFQ9NQ94 594 aaKnown RBP13.91□□□□□ -0.18
CAPN1-204ENST00000526468 STX8Q9UNK0 236 aa13.91□□□□□ -0.18
CAPN1-204ENST00000526468 MTMR7Q9Y216 660 aa13.91□□□□□ -0.18
CAPN1-204ENST00000526468 TSPY2A6NKD2 308 aa13.9□□□□□ -0.18
CAPN1-204ENST00000526468 PATL2C9JE40 543 aaKnown RBP13.9□□□□□ -0.18
CAPN1-204ENST00000526468 ARVCFO00192 962 aa13.9□□□□□ -0.18
CAPN1-204ENST00000526468 ALAS1P13196 640 aa13.9□□□□□ -0.18
CAPN1-204ENST00000526468 TFAP4Q01664 338 aa13.9□□□□□ -0.18
CAPN1-204ENST00000526468 CCDC96Q2M329 555 aa13.9□□□□□ -0.18
CAPN1-204ENST00000526468 MFSD5Q6N075 450 aa13.9□□□□□ -0.18
CAPN1-204ENST00000526468 PSRC1Q6PGN9 363 aaPredicted RBP13.9□□□□□ -0.18
CAPN1-204ENST00000526468 CCDC129Q6ZRS4 1044 aa13.9□□□□□ -0.18
CAPN1-204ENST00000526468 KCTD1Q719H9 257 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms