RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 SNHG28P0DPA3 235 aa19.98■□□□□ 0.79
CCS-203ENST00000526058 TAL1P17542 331 aaPredicted RBP19.98■□□□□ 0.79
CCS-203ENST00000526058 NT5C2P49902 561 aa19.98■□□□□ 0.79
CCS-203ENST00000526058 ANO1Q5XXA6 986 aa19.98■□□□□ 0.79
CCS-203ENST00000526058 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.98■□□□□ 0.795e-6■■■■■ 45.5
CCS-203ENST00000526058 ANKRD35Q8N283 1001 aa19.98■□□□□ 0.79
CCS-203ENST00000526058 CNNM2Q9H8M5 875 aa19.98■□□□□ 0.79
CCS-203ENST00000526058 FBXO40Q9UH90 709 aa19.98■□□□□ 0.79
CCS-203ENST00000526058 TAF6LQ9Y6J9 622 aa19.98■□□□□ 0.79
CCS-203ENST00000526058 H0YGN5 161 aa19.97■□□□□ 0.79
CCS-203ENST00000526058 ZNF543Q08ER8 600 aa19.97■□□□□ 0.79
CCS-203ENST00000526058 CCDC178Q5BJE1 867 aa19.97■□□□□ 0.79
CCS-203ENST00000526058 SYDE2Q5VT97 1194 aa19.97■□□□□ 0.79
CCS-203ENST00000526058 ENAHQ8N8S7 591 aaPredicted RBP19.97■□□□□ 0.79
CCS-203ENST00000526058 ANKS1AQ92625 1134 aa19.97■□□□□ 0.79
CCS-203ENST00000526058 RANBP17Q9H2T7 1088 aaKnown RBP19.97■□□□□ 0.79
CCS-203ENST00000526058 C11orf49Q9H6J7 331 aa19.97■□□□□ 0.79
CCS-203ENST00000526058 RNF146Q9NTX7 359 aa19.97■□□□□ 0.79
CCS-203ENST00000526058 PCDH10Q9P2E7 1040 aa19.97■□□□□ 0.79
CCS-203ENST00000526058 U3KPZ7 1027 aaPredicted RBP19.97■□□□□ 0.79
CCS-203ENST00000526058 TNKSO95271 1327 aa19.97■□□□□ 0.79
CCS-203ENST00000526058 MCM3APO60318 1980 aa19.96■□□□□ 0.79
CCS-203ENST00000526058 MSCO60682 206 aa19.96■□□□□ 0.79
CCS-203ENST00000526058 GOLGA8HP0CJ92 632 aa19.96■□□□□ 0.79
CCS-203ENST00000526058 ALAS1P13196 640 aa19.96■□□□□ 0.79
CCS-203ENST00000526058 CYB5R4Q7L1T6 521 aa19.96■□□□□ 0.79
CCS-203ENST00000526058 PNMA1Q8ND90 353 aa19.96■□□□□ 0.79
CCS-203ENST00000526058 MAP4K1Q92918 833 aa19.96■□□□□ 0.79
CCS-203ENST00000526058 TRERF1Q96PN7 1200 aa19.96■□□□□ 0.79
CCS-203ENST00000526058 ACAD9Q9H845 621 aa19.96■□□□□ 0.79
CCS-203ENST00000526058 KAT14Q9H8E8 782 aa19.96■□□□□ 0.79
CCS-203ENST00000526058 SEPT4O43236 478 aa19.95■□□□□ 0.78
CCS-203ENST00000526058 ICAM1P05362 532 aa19.95■□□□□ 0.78
CCS-203ENST00000526058 MUM1L1Q5H9M0 696 aa19.95■□□□□ 0.78
CCS-203ENST00000526058 CCDC136Q96JN2 1154 aa19.95■□□□□ 0.78
CCS-203ENST00000526058 FGD4Q96M96 766 aa19.95■□□□□ 0.78
CCS-203ENST00000526058 CCPG1Q9ULG6 757 aa19.95■□□□□ 0.78
CCS-203ENST00000526058 PFASO15067 1338 aa19.95■□□□□ 0.78
CCS-203ENST00000526058 COL6A1P12109 1028 aa19.94■□□□□ 0.78
CCS-203ENST00000526058 TKFCQ3LXA3 575 aa19.94■□□□□ 0.78
CCS-203ENST00000526058 BMP2KLQ5H9B9 411 aa19.94■□□□□ 0.78
CCS-203ENST00000526058 ESYT1Q9BSJ8 1104 aa19.94■□□□□ 0.78
CCS-203ENST00000526058 UBAC1Q9BSL1 405 aa19.94■□□□□ 0.78
CCS-203ENST00000526058 CPVLQ9H3G5 476 aa19.94■□□□□ 0.78
CCS-203ENST00000526058 A1CFQ9NQ94 594 aaKnown RBP19.94■□□□□ 0.78
CCS-203ENST00000526058 E7EWF7 191 aa19.93■□□□□ 0.78
CCS-203ENST00000526058 EVI5O60447 810 aa19.93■□□□□ 0.78
CCS-203ENST00000526058 SNAI1O95863 264 aaPredicted RBP19.93■□□□□ 0.78
CCS-203ENST00000526058 ZNF865P0CJ78 1059 aaPredicted RBP19.93■□□□□ 0.78
CCS-203ENST00000526058 CNTN2Q02246 1040 aa19.93■□□□□ 0.78
CCS-203ENST00000526058 TRDNQ13061 729 aa19.93■□□□□ 0.78
CCS-203ENST00000526058 MAMDC4Q6UXC1 1216 aa19.93■□□□□ 0.78
CCS-203ENST00000526058 STOX1Q6ZVD7 989 aa19.93■□□□□ 0.78
CCS-203ENST00000526058 UBA5Q9GZZ9 404 aa19.93■□□□□ 0.78
CCS-203ENST00000526058 LSG1Q9H089 658 aaKnown RBP19.93■□□□□ 0.78
CCS-203ENST00000526058 NRBP1Q9UHY1 535 aa19.93■□□□□ 0.78
CCS-203ENST00000526058 RBM8AQ9Y5S9 174 aaKnown RBP19.93■□□□□ 0.78
CCS-203ENST00000526058 RANBP2P49792 3224 aaKnown RBP19.93■□□□□ 0.78
CCS-203ENST00000526058 SEC23AQ15436 765 aa19.92■□□□□ 0.78
CCS-203ENST00000526058 GPATCH4Q5T3I0 446 aaKnown RBP19.92■□□□□ 0.78
CCS-203ENST00000526058 GJC2Q5T442 439 aaPredicted RBP19.92■□□□□ 0.78
CCS-203ENST00000526058 IFIT1BQ5T764 474 aaKnown RBP19.92■□□□□ 0.78
CCS-203ENST00000526058 ZNF467Q7Z7K2 595 aaPredicted RBP19.92■□□□□ 0.78
CCS-203ENST00000526058 MSL3Q8N5Y2 521 aaKnown RBP19.92■□□□□ 0.78
CCS-203ENST00000526058 SYNGAP1Q96PV0 1343 aa19.92■□□□□ 0.78
CCS-203ENST00000526058 LCTP09848 1927 aa19.92■□□□□ 0.78
CCS-203ENST00000526058 POTEB2H3BUK9 544 aa19.91■□□□□ 0.78
CCS-203ENST00000526058 KIAA1211Q6ZU35 1233 aa19.91■□□□□ 0.78
CCS-203ENST00000526058 FAM133AQ8N9E0 248 aa19.91■□□□□ 0.78
CCS-203ENST00000526058 CNPY2Q9Y2B0 182 aa19.91■□□□□ 0.78
CCS-203ENST00000526058 NR2E3Q9Y5X4 410 aa19.91■□□□□ 0.78
CCS-203ENST00000526058 SOWAHBA6NEL2 793 aa19.9■□□□□ 0.78
CCS-203ENST00000526058 NSMFQ6X4W1 530 aa19.9■□□□□ 0.78
CCS-203ENST00000526058 CHST3Q7LGC8 479 aa19.9■□□□□ 0.78
CCS-203ENST00000526058 CCDC144CPQ8IYA2 1237 aa19.9■□□□□ 0.78
CCS-203ENST00000526058 NCOA7Q8NI08 942 aa19.9■□□□□ 0.78
CCS-203ENST00000526058 SENP2Q9HC62 589 aa19.9■□□□□ 0.78
CCS-203ENST00000526058 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.9■□□□□ 0.78
CCS-203ENST00000526058 CYP39A1Q9NYL5 469 aa19.9■□□□□ 0.78
CCS-203ENST00000526058 DNM1LO00429 736 aa19.89■□□□□ 0.77
CCS-203ENST00000526058 NFIBO00712 420 aa19.89■□□□□ 0.77
CCS-203ENST00000526058 MYCNP04198 464 aaPredicted RBP19.89■□□□□ 0.77
CCS-203ENST00000526058 PARP1P09874 1014 aaKnown RBP19.89■□□□□ 0.77
CCS-203ENST00000526058 MYH6P13533 1939 aa19.89■□□□□ 0.77
CCS-203ENST00000526058 ARMCX2Q7L311 632 aa19.89■□□□□ 0.77
CCS-203ENST00000526058 RALYLQ86SE5 291 aaKnown RBP19.89■□□□□ 0.77
CCS-203ENST00000526058 C7orf61Q8IZ16 206 aa19.89■□□□□ 0.77
CCS-203ENST00000526058 ARRDC4Q8NCT1 418 aa19.89■□□□□ 0.77
CCS-203ENST00000526058 LENG1Q96BZ8 264 aaPredicted RBP19.89■□□□□ 0.77
CCS-203ENST00000526058 PURBQ96QR8 312 aaKnown RBP19.89■□□□□ 0.77
CCS-203ENST00000526058 SENP6Q9GZR1 1112 aaPredicted RBP19.89■□□□□ 0.77
CCS-203ENST00000526058 ZHX1Q9UKY1 873 aaPredicted RBP19.89■□□□□ 0.77
CCS-203ENST00000526058 DDX49Q9Y6V7 483 aaKnown RBP19.89■□□□□ 0.77
CCS-203ENST00000526058 ASTN1O14525 1302 aa19.88■□□□□ 0.77
CCS-203ENST00000526058 IFIT3O14879 490 aaKnown RBP19.88■□□□□ 0.77
CCS-203ENST00000526058 RARBP10826 455 aa19.88■□□□□ 0.77
CCS-203ENST00000526058 AKR1A1P14550 325 aa19.88■□□□□ 0.77
CCS-203ENST00000526058 ANTXR2P58335 489 aa19.88■□□□□ 0.77
CCS-203ENST00000526058 ACVR2BQ13705 512 aa19.88■□□□□ 0.77
CCS-203ENST00000526058 LRRC26Q2I0M4 334 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms