RNA–Protein interactions for RNA: ENST00000525443.1

LTBP3-204, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 3,162 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-204ENST00000525443 MAF1Q9H063 256 aa16.46■□□□□ 0.23
LTBP3-204ENST00000525443 MMADHCQ9H3L0 296 aaPredicted RBP16.46■□□□□ 0.23
LTBP3-204ENST00000525443 NOP53Q9NZM5 478 aaKnown RBP16.46■□□□□ 0.23
LTBP3-204ENST00000525443 CMA1P23946 247 aa16.46■□□□□ 0.22
LTBP3-204ENST00000525443 PTPN12Q05209 780 aaKnown RBP16.46■□□□□ 0.22
LTBP3-204ENST00000525443 TFCP2Q12800 502 aa16.46■□□□□ 0.22
LTBP3-204ENST00000525443 SF3A3Q12874 501 aaKnown RBP eCLIP16.46■□□□□ 0.221e-6■■□□□ 11.9
LTBP3-204ENST00000525443 ALS2CLQ60I27 953 aa16.46■□□□□ 0.22
LTBP3-204ENST00000525443 ZNF589Q86UQ0 364 aaPredicted RBP16.46■□□□□ 0.22
LTBP3-204ENST00000525443 SEC16BQ96JE7 1060 aa16.46■□□□□ 0.22
LTBP3-204ENST00000525443 LRRC1Q9BTT6 524 aa16.46■□□□□ 0.22
LTBP3-204ENST00000525443 MMTAG2Q9BU76 263 aaKnown RBP16.46■□□□□ 0.22
LTBP3-204ENST00000525443 MATR3P43243 847 aaKnown RBP eCLIP16.45■□□□□ 0.22
LTBP3-204ENST00000525443 GALNT15Q8N3T1 639 aa16.45■□□□□ 0.22
LTBP3-204ENST00000525443 JAKMIP2Q96AA8 810 aa16.45■□□□□ 0.22
LTBP3-204ENST00000525443 PANK4Q9NVE7 773 aa16.45■□□□□ 0.22
LTBP3-204ENST00000525443 SPDYE5A6NIY4 337 aa16.45■□□□□ 0.22
LTBP3-204ENST00000525443 NUTM2BA6NNL0 878 aaPredicted RBP16.45■□□□□ 0.22
LTBP3-204ENST00000525443 NUTM2EB1AL46 878 aaPredicted RBP16.45■□□□□ 0.22
LTBP3-204ENST00000525443 METTL16Q86W50 562 aaKnown RBP16.45■□□□□ 0.22
LTBP3-204ENST00000525443 NUTM2AQ8IVF1 878 aaPredicted RBP16.45■□□□□ 0.22
LTBP3-204ENST00000525443 EVI5LQ96CN4 794 aa16.45■□□□□ 0.22
LTBP3-204ENST00000525443 L3MBTL3Q96JM7 780 aaPredicted RBP16.45■□□□□ 0.22
LTBP3-204ENST00000525443 MRC1P22897 1456 aa16.45■□□□□ 0.22
LTBP3-204ENST00000525443 C5P01031 1676 aa16.45■□□□□ 0.22
LTBP3-204ENST00000525443 ZNF233A6NK53 670 aa16.44■□□□□ 0.22
LTBP3-204ENST00000525443 DNAJC8O75937 253 aaPredicted RBP16.44■□□□□ 0.22
LTBP3-204ENST00000525443 TEKT4Q8WW24 435 aa16.44■□□□□ 0.22
LTBP3-204ENST00000525443 CCDC85AQ96PX6 553 aaPredicted RBP16.44■□□□□ 0.22
LTBP3-204ENST00000525443 FSD1Q9BTV5 496 aa16.44■□□□□ 0.22
LTBP3-204ENST00000525443 CKAP4Q07065 602 aaKnown RBP16.44■□□□□ 0.22
LTBP3-204ENST00000525443 TMEM62Q0P6H9 643 aa16.44■□□□□ 0.22
LTBP3-204ENST00000525443 BYSLQ13895 437 aaKnown RBP16.44■□□□□ 0.22
LTBP3-204ENST00000525443 CRELD2Q6UXH1 353 aaPredicted RBP16.44■□□□□ 0.22
LTBP3-204ENST00000525443 TBC1D1Q86TI0 1168 aaPredicted RBP16.44■□□□□ 0.22
LTBP3-204ENST00000525443 CCDC43Q96MW1 224 aaKnown RBP16.44■□□□□ 0.22
LTBP3-204ENST00000525443 LLPHQ9BRT6 129 aaKnown RBP16.44■□□□□ 0.22
LTBP3-204ENST00000525443 COPRSQ9NQ92 184 aa16.44■□□□□ 0.22
LTBP3-204ENST00000525443 GJB4Q9NTQ9 266 aa16.44■□□□□ 0.22
LTBP3-204ENST00000525443 CRYBG1Q9Y4K1 1723 aa16.44■□□□□ 0.22
LTBP3-204ENST00000525443 MYH8P13535 1937 aa16.44■□□□□ 0.22
LTBP3-204ENST00000525443 CUL3Q13618 768 aa16.44■□□□□ 0.22
LTBP3-204ENST00000525443 NUGGCQ68CJ6 796 aa16.44■□□□□ 0.22
LTBP3-204ENST00000525443 TRIM42Q8IWZ5 723 aa16.44■□□□□ 0.22
LTBP3-204ENST00000525443 SYCP3Q8IZU3 236 aa16.44■□□□□ 0.22
LTBP3-204ENST00000525443 NEUROD6Q96NK8 337 aa16.44■□□□□ 0.22
LTBP3-204ENST00000525443 TSPYL2Q9H2G4 693 aaPredicted RBP16.44■□□□□ 0.22
LTBP3-204ENST00000525443 USP42Q9H9J4 1324 aaKnown RBP16.43■□□□□ 0.22
LTBP3-204ENST00000525443 GMNCA6NCL1 334 aa16.43■□□□□ 0.22
LTBP3-204ENST00000525443 YEATS4O95619 227 aa16.43■□□□□ 0.22
LTBP3-204ENST00000525443 CDC25AP30304 524 aa16.43■□□□□ 0.22
LTBP3-204ENST00000525443 MXRA7P84157 204 aa16.43■□□□□ 0.22
LTBP3-204ENST00000525443 PPARAQ07869 468 aa16.43■□□□□ 0.22
LTBP3-204ENST00000525443 LACTB2Q53H82 288 aaPredicted RBP16.43■□□□□ 0.22
LTBP3-204ENST00000525443 EDC3Q96F86 508 aaKnown RBP16.43■□□□□ 0.22
LTBP3-204ENST00000525443 C2CD2Q9Y426 696 aa16.43■□□□□ 0.22
LTBP3-204ENST00000525443 NDUFB9Q9Y6M9 179 aa16.43■□□□□ 0.22
LTBP3-204ENST00000525443 A0A1B0GTH6 734 aa16.43■□□□□ 0.22
LTBP3-204ENST00000525443 ATP6V1G1O75348 118 aa16.43■□□□□ 0.22
LTBP3-204ENST00000525443 STARD3NLO95772 234 aa16.43■□□□□ 0.22
LTBP3-204ENST00000525443 MAP3K12Q12852 859 aa16.43■□□□□ 0.22
LTBP3-204ENST00000525443 CACNA2D3Q8IZS8 1091 aa16.43■□□□□ 0.22
LTBP3-204ENST00000525443 CCDC63Q8NA47 563 aa16.43■□□□□ 0.22
LTBP3-204ENST00000525443 MED15Q96RN5 788 aa16.43■□□□□ 0.22
LTBP3-204ENST00000525443 N4BP2Q86UW6 1770 aaPredicted RBP16.42■□□□□ 0.22
LTBP3-204ENST00000525443 SLMAPQ14BN4 828 aa16.42■□□□□ 0.22
LTBP3-204ENST00000525443 DBN1Q16643 649 aa16.42■□□□□ 0.22
LTBP3-204ENST00000525443 CFAP58Q5T655 872 aa16.42■□□□□ 0.22
LTBP3-204ENST00000525443 TRIM68Q6AZZ1 485 aa16.42■□□□□ 0.22
LTBP3-204ENST00000525443 CCDC70Q6NSX1 233 aa16.42■□□□□ 0.22
LTBP3-204ENST00000525443 ATL2Q8NHH9 583 aa16.42■□□□□ 0.22
LTBP3-204ENST00000525443 RPGRIP1Q96KN7 1286 aa16.42■□□□□ 0.22
LTBP3-204ENST00000525443 DNAAF2Q9NVR5 837 aaKnown RBP16.42■□□□□ 0.22
LTBP3-204ENST00000525443 WWC3Q9ULE0 1092 aa16.42■□□□□ 0.22
LTBP3-204ENST00000525443 LIN7AO14910 233 aaPredicted RBP16.42■□□□□ 0.22
LTBP3-204ENST00000525443 GYPCP04921 128 aa16.42■□□□□ 0.22
LTBP3-204ENST00000525443 TUBP50607 506 aa16.42■□□□□ 0.22
LTBP3-204ENST00000525443 EPHB4P54760 987 aa16.42■□□□□ 0.22
LTBP3-204ENST00000525443 SPICE1Q8N0Z3 855 aa16.42■□□□□ 0.22
LTBP3-204ENST00000525443 CCT6BQ92526 530 aa16.42■□□□□ 0.22
LTBP3-204ENST00000525443 RBM17Q96I25 401 aaKnown RBP16.42■□□□□ 0.22
LTBP3-204ENST00000525443 UBE2OQ9C0C9 1292 aaKnown RBP16.42■□□□□ 0.22
LTBP3-204ENST00000525443 POLR3EQ9NVU0 708 aa16.42■□□□□ 0.22
LTBP3-204ENST00000525443 PSMD14O00487 310 aa16.42■□□□□ 0.22
LTBP3-204ENST00000525443 RFX5P48382 616 aaPredicted RBP16.42■□□□□ 0.22
LTBP3-204ENST00000525443 RABL6Q3YEC7 729 aaPredicted RBP16.42■□□□□ 0.22
LTBP3-204ENST00000525443 CCDC178Q5BJE1 867 aa16.42■□□□□ 0.22
LTBP3-204ENST00000525443 SLC9C2Q5TAH2 1124 aa16.42■□□□□ 0.22
LTBP3-204ENST00000525443 SYNE3Q6ZMZ3 975 aa16.42■□□□□ 0.22
LTBP3-204ENST00000525443 U3KPZ7 1027 aaPredicted RBP16.42■□□□□ 0.22
LTBP3-204ENST00000525443 RNF225M0QZC1 329 aaPredicted RBP16.41■□□□□ 0.22
LTBP3-204ENST00000525443 M0R2C6 588 aa16.41■□□□□ 0.22
LTBP3-204ENST00000525443 EVI5O60447 810 aa16.41■□□□□ 0.22
LTBP3-204ENST00000525443 TNNI3KQ59H18 835 aa16.41■□□□□ 0.22
LTBP3-204ENST00000525443 KIF6Q6ZMV9 814 aa16.41■□□□□ 0.22
LTBP3-204ENST00000525443 NOC3LQ8WTT2 800 aaKnown RBP16.41■□□□□ 0.22
LTBP3-204ENST00000525443 REXO2Q9Y3B8 237 aaKnown RBP16.41■□□□□ 0.22
LTBP3-204ENST00000525443 FPGT-TNNI3KV9GXZ4 949 aa16.41■□□□□ 0.22
LTBP3-204ENST00000525443 PKD1L3Q7Z443 1732 aa16.41■□□□□ 0.22
LTBP3-204ENST00000525443 N4BP3O15049 544 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms