RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 PNMA1Q8ND90 353 aa21.72■■□□□ 1.07
TSPAN4-215ENST00000525334 DPF3Q92784 378 aa21.72■■□□□ 1.07
TSPAN4-215ENST00000525334 DDX11Q96FC9 970 aa21.72■■□□□ 1.07
TSPAN4-215ENST00000525334 UBAC1Q9BSL1 405 aa21.72■■□□□ 1.07
TSPAN4-215ENST00000525334 KAT14Q9H8E8 782 aa21.72■■□□□ 1.07
TSPAN4-215ENST00000525334 DIS3Q9Y2L1 958 aaKnown RBP21.72■■□□□ 1.07
TSPAN4-215ENST00000525334 RBM8AQ9Y5S9 174 aaKnown RBP21.72■■□□□ 1.07
TSPAN4-215ENST00000525334 FRMPD3Q5JV73 1810 aa21.71■■□□□ 1.07
TSPAN4-215ENST00000525334 CNGA1P29973 690 aa21.71■■□□□ 1.07
TSPAN4-215ENST00000525334 TRDNQ13061 729 aa21.71■■□□□ 1.07
TSPAN4-215ENST00000525334 KIAA1211Q6ZU35 1233 aa21.71■■□□□ 1.07
TSPAN4-215ENST00000525334 CYB5R4Q7L1T6 521 aa21.71■■□□□ 1.07
TSPAN4-215ENST00000525334 DIS3LQ8TF46 1054 aaKnown RBP21.71■■□□□ 1.07
TSPAN4-215ENST00000525334 HTATIP2Q9BUP3 242 aa21.71■■□□□ 1.07
TSPAN4-215ENST00000525334 LSG1Q9H089 658 aaKnown RBP21.71■■□□□ 1.07
TSPAN4-215ENST00000525334 RANBP17Q9H2T7 1088 aaKnown RBP21.71■■□□□ 1.07
TSPAN4-215ENST00000525334 RNF146Q9NTX7 359 aa21.71■■□□□ 1.07
TSPAN4-215ENST00000525334 DNAJC25-GNG10A0A024R161 153 aa21.7■■□□□ 1.06
TSPAN4-215ENST00000525334 E7EWF7 191 aa21.7■■□□□ 1.06
TSPAN4-215ENST00000525334 STOX1Q6ZVD7 989 aa21.7■■□□□ 1.06
TSPAN4-215ENST00000525334 ANKRD35Q8N283 1001 aa21.7■■□□□ 1.06
TSPAN4-215ENST00000525334 PAWRQ96IZ0 340 aaKnown RBP21.7■■□□□ 1.06
TSPAN4-215ENST00000525334 ACAD9Q9H845 621 aa21.7■■□□□ 1.06
TSPAN4-215ENST00000525334 DDX20Q9UHI6 824 aaKnown RBP21.7■■□□□ 1.06
TSPAN4-215ENST00000525334 GOLGA8HP0CJ92 632 aa21.69■■□□□ 1.06
TSPAN4-215ENST00000525334 ALAS1P13196 640 aa21.69■■□□□ 1.06
TSPAN4-215ENST00000525334 TAL1P17542 331 aaPredicted RBP21.69■■□□□ 1.06
TSPAN4-215ENST00000525334 MNX1P50219 401 aaPredicted RBP21.69■■□□□ 1.06
TSPAN4-215ENST00000525334 TKFCQ3LXA3 575 aa21.69■■□□□ 1.06
TSPAN4-215ENST00000525334 PRAMEF19Q5SWL8 479 aa21.69■■□□□ 1.06
TSPAN4-215ENST00000525334 GPATCH4Q5T3I0 446 aaKnown RBP21.69■■□□□ 1.06
TSPAN4-215ENST00000525334 TINF2Q9BSI4 451 aa21.69■■□□□ 1.06
TSPAN4-215ENST00000525334 CCPG1Q9ULG6 757 aa21.69■■□□□ 1.06
TSPAN4-215ENST00000525334 CEP290O15078 2479 aa21.69■■□□□ 1.06
TSPAN4-215ENST00000525334 H0YGN5 161 aa21.68■■□□□ 1.06
TSPAN4-215ENST00000525334 MSCO60682 206 aa21.68■■□□□ 1.06
TSPAN4-215ENST00000525334 ICAM1P05362 532 aa21.68■■□□□ 1.06
TSPAN4-215ENST00000525334 SEC23AQ15436 765 aa21.68■■□□□ 1.06
TSPAN4-215ENST00000525334 IFIT1BQ5T764 474 aaKnown RBP21.68■■□□□ 1.06
TSPAN4-215ENST00000525334 NECAB2Q7Z6G3 386 aa21.68■■□□□ 1.06
TSPAN4-215ENST00000525334 RALYLQ86SE5 291 aaKnown RBP21.68■■□□□ 1.06
TSPAN4-215ENST00000525334 TRERF1Q96PN7 1200 aa21.68■■□□□ 1.06
TSPAN4-215ENST00000525334 PCDH10Q9P2E7 1040 aa21.68■■□□□ 1.06
TSPAN4-215ENST00000525334 NCOA7Q8NI08 942 aa21.67■■□□□ 1.06
TSPAN4-215ENST00000525334 FGD4Q96M96 766 aa21.67■■□□□ 1.06
TSPAN4-215ENST00000525334 ANO2Q9NQ90 1003 aa21.67■■□□□ 1.06
TSPAN4-215ENST00000525334 A1CFQ9NQ94 594 aaKnown RBP21.67■■□□□ 1.06
TSPAN4-215ENST00000525334 SEPT4O43236 478 aa21.66■■□□□ 1.06
TSPAN4-215ENST00000525334 CDC45O75419 566 aa21.66■■□□□ 1.06
TSPAN4-215ENST00000525334 MUM1L1Q5H9M0 696 aa21.66■■□□□ 1.06
TSPAN4-215ENST00000525334 UBA5Q9GZZ9 404 aa21.66■■□□□ 1.06
TSPAN4-215ENST00000525334 CPVLQ9H3G5 476 aa21.66■■□□□ 1.06
TSPAN4-215ENST00000525334 NRBP1Q9UHY1 535 aa21.66■■□□□ 1.06
TSPAN4-215ENST00000525334 ASPRV1Q53RT3 343 aa21.65■■□□□ 1.06
TSPAN4-215ENST00000525334 ANO1Q5XXA6 986 aa21.65■■□□□ 1.06
TSPAN4-215ENST00000525334 ZNF467Q7Z7K2 595 aaPredicted RBP21.65■■□□□ 1.06
TSPAN4-215ENST00000525334 MSL3Q8N5Y2 521 aaKnown RBP21.65■■□□□ 1.06
TSPAN4-215ENST00000525334 C11orf49Q9H6J7 331 aa21.65■■□□□ 1.06
TSPAN4-215ENST00000525334 PFASO15067 1338 aa21.64■■□□□ 1.05
TSPAN4-215ENST00000525334 SYNGAP1Q96PV0 1343 aa21.64■■□□□ 1.05
TSPAN4-215ENST00000525334 SMCHD1A6NHR9 2005 aa21.64■■□□□ 1.05
TSPAN4-215ENST00000525334 POTEB2H3BUK9 544 aa21.64■■□□□ 1.05
TSPAN4-215ENST00000525334 IFIT3O14879 490 aaKnown RBP21.64■■□□□ 1.05
TSPAN4-215ENST00000525334 SLC27A2O14975 620 aa21.64■■□□□ 1.05
TSPAN4-215ENST00000525334 CENPBP07199 599 aaPredicted RBP21.64■■□□□ 1.05
TSPAN4-215ENST00000525334 CNTN2Q02246 1040 aa21.64■■□□□ 1.05
TSPAN4-215ENST00000525334 CASC1Q6TDU7 716 aa21.64■■□□□ 1.05
TSPAN4-215ENST00000525334 MAMDC4Q6UXC1 1216 aa21.64■■□□□ 1.05
TSPAN4-215ENST00000525334 CHST3Q7LGC8 479 aa21.64■■□□□ 1.05
TSPAN4-215ENST00000525334 MB21D2Q8IYB1 491 aaPredicted RBP21.64■■□□□ 1.05
TSPAN4-215ENST00000525334 FAM133AQ8N9E0 248 aa21.64■■□□□ 1.05
TSPAN4-215ENST00000525334 CNPY2Q9Y2B0 182 aa21.64■■□□□ 1.05
TSPAN4-215ENST00000525334 NR2E3Q9Y5X4 410 aa21.64■■□□□ 1.05
TSPAN4-215ENST00000525334 WDR19Q8NEZ3 1342 aa21.63■■□□□ 1.05
TSPAN4-215ENST00000525334 SNAI1O95863 264 aaPredicted RBP21.63■■□□□ 1.05
TSPAN4-215ENST00000525334 PARP1P09874 1014 aaKnown RBP21.63■■□□□ 1.05
TSPAN4-215ENST00000525334 ZNF865P0CJ78 1059 aaPredicted RBP21.63■■□□□ 1.05
TSPAN4-215ENST00000525334 ANTXR2P58335 489 aa21.63■■□□□ 1.05
TSPAN4-215ENST00000525334 CREB3L3Q68CJ9 461 aa21.63■■□□□ 1.05
TSPAN4-215ENST00000525334 SENP2Q9HC62 589 aa21.63■■□□□ 1.05
TSPAN4-215ENST00000525334 CYP39A1Q9NYL5 469 aa21.63■■□□□ 1.05
TSPAN4-215ENST00000525334 ERICH2A1L162 156 aa21.62■■□□□ 1.05
TSPAN4-215ENST00000525334 EVI5O60447 810 aa21.62■■□□□ 1.05
TSPAN4-215ENST00000525334 COL6A1P12109 1028 aa21.62■■□□□ 1.05
TSPAN4-215ENST00000525334 NECTIN1Q15223 517 aa21.62■■□□□ 1.05
TSPAN4-215ENST00000525334 NSMFQ6X4W1 530 aa21.62■■□□□ 1.05
TSPAN4-215ENST00000525334 PNMA2Q9UL42 364 aa21.62■■□□□ 1.05
TSPAN4-215ENST00000525334 ALPK3Q96L96 1907 aa21.62■■□□□ 1.05
TSPAN4-215ENST00000525334 NFIBO00712 420 aa21.61■■□□□ 1.05
TSPAN4-215ENST00000525334 WTAPQ15007 396 aa21.61■■□□□ 1.05
TSPAN4-215ENST00000525334 SART3Q15020 963 aaKnown RBP21.61■■□□□ 1.05
TSPAN4-215ENST00000525334 CDC37Q16543 378 aaPredicted RBP21.61■■□□□ 1.05
TSPAN4-215ENST00000525334 TMEM67Q5HYA8 995 aa21.61■■□□□ 1.05
TSPAN4-215ENST00000525334 ARMCX2Q7L311 632 aa21.61■■□□□ 1.05
TSPAN4-215ENST00000525334 ADGRF4Q8IZF3 695 aa21.61■■□□□ 1.05
TSPAN4-215ENST00000525334 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.61■■□□□ 1.05
TSPAN4-215ENST00000525334 LCTP09848 1927 aa21.61■■□□□ 1.05
TSPAN4-215ENST00000525334 MCM3APO60318 1980 aa21.6■■□□□ 1.05
TSPAN4-215ENST00000525334 SOWAHBA6NEL2 793 aa21.6■■□□□ 1.05
TSPAN4-215ENST00000525334 DNM1LO00429 736 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms