RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 LRRC41Q15345 812 aa14.81□□□□□ -0.04
SMCO4-202ENST00000525141 RRP12Q5JTH9 1297 aaKnown RBP14.81□□□□□ -0.04
SMCO4-202ENST00000525141 AKNAD1Q5T1N1 836 aa14.81□□□□□ -0.04
SMCO4-202ENST00000525141 DDX11Q96FC9 970 aa14.81□□□□□ -0.04
SMCO4-202ENST00000525141 NRBP1Q9UHY1 535 aa14.81□□□□□ -0.04
SMCO4-202ENST00000525141 PRR12Q9ULL5 1215 aa14.81□□□□□ -0.04
SMCO4-202ENST00000525141 ZMYM6O95789 1325 aa14.81□□□□□ -0.04
SMCO4-202ENST00000525141 SLC16A2P36021 539 aa14.8□□□□□ -0.04
SMCO4-202ENST00000525141 STAT2P52630 851 aa14.8□□□□□ -0.04
SMCO4-202ENST00000525141 ATN1P54259 1190 aaPredicted RBP14.8□□□□□ -0.04
SMCO4-202ENST00000525141 MFAP1P55081 439 aaKnown RBP14.8□□□□□ -0.04
SMCO4-202ENST00000525141 CNTN2Q02246 1040 aa14.8□□□□□ -0.04
SMCO4-202ENST00000525141 BTNL9Q6UXG8 535 aa14.8□□□□□ -0.04
SMCO4-202ENST00000525141 SLC39A5Q6ZMH5 540 aa14.8□□□□□ -0.04
SMCO4-202ENST00000525141 FAM160B2Q86V87 743 aa14.8□□□□□ -0.04
SMCO4-202ENST00000525141 ARRDC4Q8NCT1 418 aa14.8□□□□□ -0.04
SMCO4-202ENST00000525141 CHST13Q8NET6 341 aa14.8□□□□□ -0.04
SMCO4-202ENST00000525141 DIAPH3Q9NSV4 1193 aa14.8□□□□□ -0.04
SMCO4-202ENST00000525141 SZT2Q5T011 3432 aa14.8□□□□□ -0.04
SMCO4-202ENST00000525141 SOWAHBA6NEL2 793 aa14.79□□□□□ -0.04
SMCO4-202ENST00000525141 SOX1O00570 391 aaPredicted RBP14.79□□□□□ -0.04
SMCO4-202ENST00000525141 FDX1P10109 184 aa14.79□□□□□ -0.04
SMCO4-202ENST00000525141 TOP1P11387 765 aaKnown RBP14.79□□□□□ -0.04
SMCO4-202ENST00000525141 ADCYAP1R1P41586 468 aa14.79□□□□□ -0.04
SMCO4-202ENST00000525141 MAGEA10P43363 369 aaPredicted RBP14.79□□□□□ -0.04
SMCO4-202ENST00000525141 IRX5P78411 483 aaPredicted RBP14.79□□□□□ -0.04
SMCO4-202ENST00000525141 MUM1L1Q5H9M0 696 aa14.79□□□□□ -0.04
SMCO4-202ENST00000525141 MFSD6Q6ZSS7 791 aa14.79□□□□□ -0.04
SMCO4-202ENST00000525141 ZNF467Q7Z7K2 595 aaPredicted RBP14.79□□□□□ -0.04
SMCO4-202ENST00000525141 FAM133AQ8N9E0 248 aa14.79□□□□□ -0.04
SMCO4-202ENST00000525141 LENG1Q96BZ8 264 aaPredicted RBP14.79□□□□□ -0.04
SMCO4-202ENST00000525141 KATNBL1Q9H079 304 aa14.79□□□□□ -0.04
SMCO4-202ENST00000525141 MTMR7Q9Y216 660 aa14.79□□□□□ -0.04
SMCO4-202ENST00000525141 ASTN1O14525 1302 aa14.78□□□□□ -0.04
SMCO4-202ENST00000525141 ADCY6O43306 1168 aa14.78□□□□□ -0.04
SMCO4-202ENST00000525141 PGK1P00558 417 aa14.78□□□□□ -0.04
SMCO4-202ENST00000525141 BMP2KLQ5H9B9 411 aa14.78□□□□□ -0.04
SMCO4-202ENST00000525141 PPP4R3BQ5MIZ7 849 aa14.78□□□□□ -0.04
SMCO4-202ENST00000525141 CCSAPQ6IQ19 270 aaPredicted RBP14.78□□□□□ -0.04
SMCO4-202ENST00000525141 CCDC174Q6PII3 467 aa14.78□□□□□ -0.04
SMCO4-202ENST00000525141 ANKRD35Q8N283 1001 aa14.78□□□□□ -0.04
SMCO4-202ENST00000525141 MSL3Q8N5Y2 521 aaKnown RBP14.78□□□□□ -0.04
SMCO4-202ENST00000525141 DCAF4Q8WV16 495 aa14.78□□□□□ -0.04
SMCO4-202ENST00000525141 FERMT2Q96AC1 680 aa14.78□□□□□ -0.04
SMCO4-202ENST00000525141 TTC14Q96N46 770 aa14.78□□□□□ -0.04
SMCO4-202ENST00000525141 TRERF1Q96PN7 1200 aa14.78□□□□□ -0.04
SMCO4-202ENST00000525141 PURBQ96QR8 312 aaKnown RBP14.78□□□□□ -0.04
SMCO4-202ENST00000525141 ZKSCAN3Q9BRR0 538 aa14.78□□□□□ -0.04
SMCO4-202ENST00000525141 A1CFQ9NQ94 594 aaKnown RBP14.78□□□□□ -0.04
SMCO4-202ENST00000525141 TOMM22Q9NS69 142 aa14.78□□□□□ -0.04
SMCO4-202ENST00000525141 HOMER2Q9NSB8 354 aa14.78□□□□□ -0.04
SMCO4-202ENST00000525141 CTDP1Q9Y5B0 961 aaPredicted RBP14.78□□□□□ -0.04
SMCO4-202ENST00000525141 DDX49Q9Y6V7 483 aaKnown RBP14.78□□□□□ -0.04
SMCO4-202ENST00000525141 MCM3APO60318 1980 aa14.78□□□□□ -0.04
SMCO4-202ENST00000525141 NEDD4P46934 1319 aa14.77□□□□□ -0.04
SMCO4-202ENST00000525141 SYNGAP1Q96PV0 1343 aa14.77□□□□□ -0.04
SMCO4-202ENST00000525141 ZNF213O14771 459 aa14.77□□□□□ -0.05
SMCO4-202ENST00000525141 ADAMTS4O75173 837 aa14.77□□□□□ -0.05
SMCO4-202ENST00000525141 SNHG28P0DPA3 235 aa14.77□□□□□ -0.05
SMCO4-202ENST00000525141 RTP1P59025 263 aa14.77□□□□□ -0.05
SMCO4-202ENST00000525141 ACVR2BQ13705 512 aa14.77□□□□□ -0.05
SMCO4-202ENST00000525141 KLHDC9Q8NEP7 349 aa14.77□□□□□ -0.05
SMCO4-202ENST00000525141 ANKS1AQ92625 1134 aa14.77□□□□□ -0.05
SMCO4-202ENST00000525141 RANBP17Q9H2T7 1088 aaKnown RBP14.77□□□□□ -0.05
SMCO4-202ENST00000525141 GPCPD1Q9NPB8 672 aa14.77□□□□□ -0.05
SMCO4-202ENST00000525141 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.77□□□□□ -0.05
SMCO4-202ENST00000525141 ZSWIM5Q9P217 1185 aa14.77□□□□□ -0.05
SMCO4-202ENST00000525141 FBXO40Q9UH90 709 aa14.77□□□□□ -0.05
SMCO4-202ENST00000525141 PHF24Q9UPV7 400 aa14.77□□□□□ -0.05
SMCO4-202ENST00000525141 FRMPD2Q68DX3 1309 aaPredicted RBP14.76□□□□□ -0.05
SMCO4-202ENST00000525141 A0A1W2PPC1 479 aa14.76□□□□□ -0.05
SMCO4-202ENST00000525141 PDHBP11177 359 aa14.76□□□□□ -0.05
SMCO4-202ENST00000525141 PCP11498 1178 aaKnown RBP14.76□□□□□ -0.05
SMCO4-202ENST00000525141 ALAS1P13196 640 aa14.76□□□□□ -0.05
SMCO4-202ENST00000525141 CHMLP26374 656 aa14.76□□□□□ -0.05
SMCO4-202ENST00000525141 SNX17Q15036 470 aa14.76□□□□□ -0.05
SMCO4-202ENST00000525141 TKFCQ3LXA3 575 aa14.76□□□□□ -0.05
SMCO4-202ENST00000525141 CCDC144CPQ8IYA2 1237 aa14.76□□□□□ -0.05
SMCO4-202ENST00000525141 RUFY2Q8WXA3 655 aa14.76□□□□□ -0.05
SMCO4-202ENST00000525141 DSCC1Q9BVC3 393 aa14.76□□□□□ -0.05
SMCO4-202ENST00000525141 ACAD9Q9H845 621 aa14.76□□□□□ -0.05
SMCO4-202ENST00000525141 XPNPEP3Q9NQH7 507 aa14.76□□□□□ -0.05
SMCO4-202ENST00000525141 RNF146Q9NTX7 359 aa14.76□□□□□ -0.05
SMCO4-202ENST00000525141 FAM184BQ9ULE4 1060 aa14.76□□□□□ -0.05
SMCO4-202ENST00000525141 MYADML2A6NDP7 307 aa14.75□□□□□ -0.05
SMCO4-202ENST00000525141 CTAGE5O15320 804 aa14.75□□□□□ -0.05
SMCO4-202ENST00000525141 RARBP10826 455 aa14.75□□□□□ -0.05
SMCO4-202ENST00000525141 AKR1A1P14550 325 aa14.75□□□□□ -0.05
SMCO4-202ENST00000525141 MDM2Q00987 491 aaPredicted RBP14.75□□□□□ -0.05
SMCO4-202ENST00000525141 ZNF543Q08ER8 600 aa14.75□□□□□ -0.05
SMCO4-202ENST00000525141 IKQ13123 557 aaPredicted RBP14.75□□□□□ -0.05
SMCO4-202ENST00000525141 TMEM63BQ5T3F8 832 aa14.75□□□□□ -0.05
SMCO4-202ENST00000525141 SYDE2Q5VT97 1194 aa14.75□□□□□ -0.05
SMCO4-202ENST00000525141 ARMCX2Q7L311 632 aa14.75□□□□□ -0.05
SMCO4-202ENST00000525141 SH3RF1Q7Z6J0 888 aa14.75□□□□□ -0.05
SMCO4-202ENST00000525141 SKAP1Q86WV1 359 aa14.75□□□□□ -0.05
SMCO4-202ENST00000525141 DGKHQ86XP1 1220 aa14.75□□□□□ -0.05
SMCO4-202ENST00000525141 LRCH3Q96II8 777 aa14.75□□□□□ -0.05
SMCO4-202ENST00000525141 CYP39A1Q9NYL5 469 aa14.75□□□□□ -0.05
SMCO4-202ENST00000525141 ISY1Q9ULR0 285 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms