RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 KBTBD13C9JR72 458 aa21.84■■□□□ 1.09
CAPN1-203ENST00000525013 ALAS1P13196 640 aa21.84■■□□□ 1.09
CAPN1-203ENST00000525013 SLC16A2P36021 539 aa21.84■■□□□ 1.09
CAPN1-203ENST00000525013 IMMTQ16891 758 aaKnown RBP21.84■■□□□ 1.09
CAPN1-203ENST00000525013 LRRC26Q2I0M4 334 aa21.84■■□□□ 1.09
CAPN1-203ENST00000525013 TTBK2Q6IQ55 1244 aa21.84■■□□□ 1.09
CAPN1-203ENST00000525013 TTC14Q96N46 770 aa21.84■■□□□ 1.09
CAPN1-203ENST00000525013 ZKSCAN3Q9BRR0 538 aa21.84■■□□□ 1.09
CAPN1-203ENST00000525013 ACAD9Q9H845 621 aa21.84■■□□□ 1.09
CAPN1-203ENST00000525013 GPCPD1Q9NPB8 672 aa21.84■■□□□ 1.09
CAPN1-203ENST00000525013 RNF146Q9NTX7 359 aa21.84■■□□□ 1.09
CAPN1-203ENST00000525013 RBM27Q9P2N5 1060 aaKnown RBP21.84■■□□□ 1.09
CAPN1-203ENST00000525013 ZNF536O15090 1300 aa21.83■■□□□ 1.09
CAPN1-203ENST00000525013 FRMPD2Q68DX3 1309 aaPredicted RBP21.83■■□□□ 1.09
CAPN1-203ENST00000525013 RANBP2P49792 3224 aaKnown RBP21.83■■□□□ 1.09
CAPN1-203ENST00000525013 RARBP10826 455 aa21.83■■□□□ 1.09
CAPN1-203ENST00000525013 SYN1P17600 705 aa21.83■■□□□ 1.09
CAPN1-203ENST00000525013 ATN1P54259 1190 aaPredicted RBP21.83■■□□□ 1.09
CAPN1-203ENST00000525013 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.83■■□□□ 1.09
CAPN1-203ENST00000525013 MSL3Q8N5Y2 521 aaKnown RBP21.83■■□□□ 1.09
CAPN1-203ENST00000525013 TRERF1Q96PN7 1200 aa21.83■■□□□ 1.09
CAPN1-203ENST00000525013 KDM4AO75164 1064 aa21.82■■□□□ 1.08
CAPN1-203ENST00000525013 TKFCQ3LXA3 575 aa21.82■■□□□ 1.08
CAPN1-203ENST00000525013 SYDE2Q5VT97 1194 aa21.82■■□□□ 1.08
CAPN1-203ENST00000525013 IL25Q9H293 177 aa21.82■■□□□ 1.08
CAPN1-203ENST00000525013 CCPG1Q9ULG6 757 aa21.82■■□□□ 1.08
CAPN1-203ENST00000525013 SYNGAP1Q96PV0 1343 aa21.81■■□□□ 1.08
CAPN1-203ENST00000525013 B4E1Z4 1266 aa21.81■■□□□ 1.08
CAPN1-203ENST00000525013 POTEB2H3BUK9 544 aa21.81■■□□□ 1.08
CAPN1-203ENST00000525013 SNAI1O95863 264 aaPredicted RBP21.81■■□□□ 1.08
CAPN1-203ENST00000525013 ZNF865P0CJ78 1059 aaPredicted RBP21.81■■□□□ 1.08
CAPN1-203ENST00000525013 MAMDC4Q6UXC1 1216 aa21.81■■□□□ 1.08
CAPN1-203ENST00000525013 ZNF467Q7Z7K2 595 aaPredicted RBP21.81■■□□□ 1.08
CAPN1-203ENST00000525013 IQCA1Q86XH1 822 aa21.81■■□□□ 1.08
CAPN1-203ENST00000525013 RUFY2Q8WXA3 655 aa21.81■■□□□ 1.08
CAPN1-203ENST00000525013 XPNPEP3Q9NQH7 507 aa21.81■■□□□ 1.08
CAPN1-203ENST00000525013 ZHX1Q9UKY1 873 aaPredicted RBP21.81■■□□□ 1.08
CAPN1-203ENST00000525013 PDHBP11177 359 aa21.8■■□□□ 1.08
CAPN1-203ENST00000525013 AKR1A1P14550 325 aa21.8■■□□□ 1.08
CAPN1-203ENST00000525013 CNTN2Q02246 1040 aa21.8■■□□□ 1.08
CAPN1-203ENST00000525013 LRRC41Q15345 812 aa21.8■■□□□ 1.08
CAPN1-203ENST00000525013 CCDC178Q5BJE1 867 aa21.8■■□□□ 1.08
CAPN1-203ENST00000525013 BTNL9Q6UXG8 535 aa21.8■■□□□ 1.08
CAPN1-203ENST00000525013 A1CFQ9NQ94 594 aaKnown RBP21.8■■□□□ 1.08
CAPN1-203ENST00000525013 PGK1P00558 417 aa21.79■■□□□ 1.08
CAPN1-203ENST00000525013 CHMLP26374 656 aa21.79■■□□□ 1.08
CAPN1-203ENST00000525013 NT5C2P49902 561 aa21.79■■□□□ 1.08
CAPN1-203ENST00000525013 FXR1P51114 621 aaKnown RBP eCLIP21.79■■□□□ 1.08
CAPN1-203ENST00000525013 DGKHQ86XP1 1220 aa21.79■■□□□ 1.08
CAPN1-203ENST00000525013 FERMT2Q96AC1 680 aa21.79■■□□□ 1.08
CAPN1-203ENST00000525013 LENG1Q96BZ8 264 aaPredicted RBP21.79■■□□□ 1.08
CAPN1-203ENST00000525013 KRT23Q9C075 422 aa21.79■■□□□ 1.08
CAPN1-203ENST00000525013 RANBP17Q9H2T7 1088 aaKnown RBP21.79■■□□□ 1.08
CAPN1-203ENST00000525013 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.79■■□□□ 1.08
CAPN1-203ENST00000525013 RAD50Q92878 1312 aa21.79■■□□□ 1.08
CAPN1-203ENST00000525013 ICAM1P05362 532 aa21.78■■□□□ 1.08
CAPN1-203ENST00000525013 ADCYAP1R1P41586 468 aa21.78■■□□□ 1.08
CAPN1-203ENST00000525013 ZNF543Q08ER8 600 aa21.78■■□□□ 1.08
CAPN1-203ENST00000525013 MUM1L1Q5H9M0 696 aa21.78■■□□□ 1.08
CAPN1-203ENST00000525013 ARMCX2Q7L311 632 aa21.78■■□□□ 1.08
CAPN1-203ENST00000525013 RNF180Q86T96 592 aa21.78■■□□□ 1.08
CAPN1-203ENST00000525013 FGD4Q96M96 766 aa21.78■■□□□ 1.08
CAPN1-203ENST00000525013 ZSCAN10Q96SZ4 725 aaPredicted RBP21.78■■□□□ 1.08
CAPN1-203ENST00000525013 PRO3102Q9H379 93 aa21.78■■□□□ 1.08
CAPN1-203ENST00000525013 CNNM2Q9H8M5 875 aa21.78■■□□□ 1.08
CAPN1-203ENST00000525013 ZSWIM5Q9P217 1185 aa21.78■■□□□ 1.08
CAPN1-203ENST00000525013 FAM184BQ9ULE4 1060 aa21.78■■□□□ 1.08
CAPN1-203ENST00000525013 ACVR2BQ13705 512 aa21.77■■□□□ 1.08
CAPN1-203ENST00000525013 NSMFQ6X4W1 530 aa21.77■■□□□ 1.08
CAPN1-203ENST00000525013 CCDC144CPQ8IYA2 1237 aa21.77■■□□□ 1.08
CAPN1-203ENST00000525013 FAM133AQ8N9E0 248 aa21.77■■□□□ 1.08
CAPN1-203ENST00000525013 PNMA1Q8ND90 353 aa21.77■■□□□ 1.08
CAPN1-203ENST00000525013 ABHD16BQ9H3Z7 469 aa21.77■■□□□ 1.08
CAPN1-203ENST00000525013 KAT14Q9H8E8 782 aa21.77■■□□□ 1.08
CAPN1-203ENST00000525013 GOLGA8HP0CJ92 632 aa21.76■■□□□ 1.07
CAPN1-203ENST00000525013 SNHG28P0DPA3 235 aa21.76■■□□□ 1.07
CAPN1-203ENST00000525013 MAGEA10P43363 369 aaPredicted RBP21.76■■□□□ 1.07
CAPN1-203ENST00000525013 RTP1P59025 263 aa21.76■■□□□ 1.07
CAPN1-203ENST00000525013 UBAC1Q9BSL1 405 aa21.76■■□□□ 1.07
CAPN1-203ENST00000525013 PCDH10Q9P2E7 1040 aa21.76■■□□□ 1.07
CAPN1-203ENST00000525013 ATP11BQ9Y2G3 1177 aa21.76■■□□□ 1.07
CAPN1-203ENST00000525013 SOWAHBA6NEL2 793 aa21.75■■□□□ 1.07
CAPN1-203ENST00000525013 GPATCH4Q5T3I0 446 aaKnown RBP21.75■■□□□ 1.07
CAPN1-203ENST00000525013 SLC39A5Q6ZMH5 540 aa21.75■■□□□ 1.07
CAPN1-203ENST00000525013 ENAHQ8N8S7 591 aaPredicted RBP21.75■■□□□ 1.07
CAPN1-203ENST00000525013 GDF15Q99988 308 aa21.75■■□□□ 1.07
CAPN1-203ENST00000525013 CYP39A1Q9NYL5 469 aa21.75■■□□□ 1.07
CAPN1-203ENST00000525013 MYH6P13533 1939 aa21.74■■□□□ 1.07
CAPN1-203ENST00000525013 ASB14A6NK59 587 aa21.74■■□□□ 1.07
CAPN1-203ENST00000525013 PTH1RQ03431 593 aa21.74■■□□□ 1.07
CAPN1-203ENST00000525013 CCDC144BQ3MJ40 725 aa21.74■■□□□ 1.07
CAPN1-203ENST00000525013 ANKS1AQ92625 1134 aa21.74■■□□□ 1.07
CAPN1-203ENST00000525013 PRKAG2Q9UGJ0 569 aa21.74■■□□□ 1.07
CAPN1-203ENST00000525013 PHF24Q9UPV7 400 aa21.74■■□□□ 1.07
CAPN1-203ENST00000525013 U3KPZ7 1027 aaPredicted RBP21.74■■□□□ 1.07
CAPN1-203ENST00000525013 TNKSO95271 1327 aa21.74■■□□□ 1.07
CAPN1-203ENST00000525013 DUSP11O75319 330 aaKnown RBP21.73■■□□□ 1.07
CAPN1-203ENST00000525013 TRDNQ13061 729 aa21.73■■□□□ 1.07
CAPN1-203ENST00000525013 UBA5Q9GZZ9 404 aa21.73■■□□□ 1.07
CAPN1-203ENST00000525013 CPVLQ9H3G5 476 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms