RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 MCOLN1Q9GZU1 580 aa5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 UPF2Q9HAU5 1272 aaKnown RBP5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 SLC38A10Q9HBR0 1119 aa5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 FAM217BQ9NTX9 383 aaPredicted RBP5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 ZNF214Q9UL59 606 aaPredicted RBP5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 CCPG1Q9ULG6 757 aa5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 TPCN1Q9ULQ1 816 aa5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 HPS5Q9UPZ3 1129 aa5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 PTCH2Q9Y6C5 1203 aa5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 ZNF536O15090 1300 aa5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 LOC285556D6RIA3 1793 aa5.36□□□□□ -1.55
CHMP4A-202ENST00000524955 MYPNQ86TC9 1320 aa5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 WDR19Q8NEZ3 1342 aa5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 ADAMTS3O15072 1205 aa5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 COBLO75128 1261 aa5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 DDAH1O94760 285 aa5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 ADORA2AP29274 412 aa5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 METAP2P50579 478 aaKnown RBP eCLIP5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 FCGRTP55899 365 aa5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 ANAPC15P60006 121 aa5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 CNTN2Q02246 1040 aa5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 ME3Q16798 604 aa5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 RTN1Q16799 776 aa5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 ASPRV1Q53RT3 343 aa5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 GPATCH4Q5T3I0 446 aaKnown RBP5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 BTNL9Q6UXG8 535 aa5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 SLC30A10Q6XR72 485 aa5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 PLEKHH3Q7Z736 793 aa5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 CTU1Q7Z7A3 348 aaKnown RBP5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 SGMS1Q86VZ5 419 aa5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 RIOX2Q8IUF8 465 aa5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 TMTC2Q8N394 836 aa5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 FANCBQ8NB91 859 aa5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 NPLOC4Q8TAT6 608 aa5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 GPKOWQ92917 476 aaPredicted RBP eCLIP5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 ZFP91Q96JP5 570 aaPredicted RBP5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 TBC1D32Q96NH3 1257 aa5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 TRERF1Q96PN7 1200 aa5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 TM6SF1Q9BZW5 370 aa5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 RANBP17Q9H2T7 1088 aaKnown RBP5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 RNF146Q9NTX7 359 aa5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 FLRT1Q9NZU1 646 aa5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 BIN2Q9UBW5 565 aaPredicted RBP5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 SRRDQ9UH36 339 aa5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 SYNPO2Q9UMS6 1093 aa5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 ADAMTS5Q9UNA0 930 aa5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 V9GY48 417 aaPredicted RBP5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 MYH8P13535 1937 aa5.35□□□□□ -1.55
CHMP4A-202ENST00000524955 PTPDC1A2A3K4 754 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 ZBTB5O15062 677 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 EPB41L2O43491 1005 aaKnown RBP5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 CAPN15O75808 1086 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 ICAM1P05362 532 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 FCER1AP12319 257 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 PTGS1P23219 599 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 PTPREP23469 700 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 CALML3P27482 149 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 MAPK4P31152 587 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 HOXA13P31271 388 aaPredicted RBP5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 KIF5BP33176 963 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 CYP2C19P33261 490 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 RBM25P49756 843 aaKnown RBP5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 UBXN2AP68543 259 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 CCNA1P78396 465 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 ST3GAL1Q11201 340 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 SCRN1Q12765 414 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 PRAMEF19Q5SWL8 479 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 TMTC3Q6ZXV5 915 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 HEATR3Q7Z4Q2 680 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 DPP9Q86TI2 863 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 FBXO11Q86XK2 927 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 CCDC83Q8IWF9 413 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 TNS4Q8IZW8 715 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 ANKRD35Q8N283 1001 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 MB21D1Q8N884 522 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 RAET1EQ8TD07 263 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 CLEC4DQ8WXI8 215 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 RRP36Q96EU6 259 aaKnown RBP5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 DDX11Q96FC9 970 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 PGBD1Q96JS3 809 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 AIFM3Q96NN9 605 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 MMP19Q99542 508 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 SLC26A6Q9BXS9 759 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 TEX13BQ9BXU2 312 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 AGXT2Q9BYV1 514 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 SLKQ9H2G2 1235 aaPredicted RBP5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 RIOX1Q9H6W3 641 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 A1CFQ9NQ94 594 aaKnown RBP5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 PRDM10Q9NQV6 1147 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 GJB4Q9NTQ9 266 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 FOXD4L1Q9NU39 408 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 GJD2Q9UKL4 321 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 PTPN22Q9Y2R2 807 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 PCDHA1Q9Y5I3 950 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 IVNS1ABPQ9Y6Y0 642 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 PTPRFP10586 1907 aa5.34□□□□□ -1.55
CHMP4A-202ENST00000524955 PCNTO95613 3336 aa5.33□□□□□ -1.56
CHMP4A-202ENST00000524955 CNTNAP5Q8WYK1 1306 aa5.33□□□□□ -1.56
CHMP4A-202ENST00000524955 PNMA6FA0A0J9YX94 578 aa5.33□□□□□ -1.56
CHMP4A-202ENST00000524955 SOWAHBA6NEL2 793 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms