RNA–Protein interactions for RNA: ENST00000524442.1

TTC39A-213, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 3

Gene TTC39A, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-213ENST00000524442 PALM3A6NDB9 673 aaPredicted RBP11.8□□□□□ -0.52
TTC39A-213ENST00000524442 CCDC69A6NI79 296 aa11.8□□□□□ -0.52
TTC39A-213ENST00000524442 GOLGA8HP0CJ92 632 aa11.8□□□□□ -0.52
TTC39A-213ENST00000524442 CALM1P0DP23 149 aa11.8□□□□□ -0.52
TTC39A-213ENST00000524442 CALM2P0DP24 149 aa11.8□□□□□ -0.52
TTC39A-213ENST00000524442 CALM3P0DP25 149 aa11.8□□□□□ -0.52
TTC39A-213ENST00000524442 EXOSC10Q01780 885 aaKnown RBP11.8□□□□□ -0.52
TTC39A-213ENST00000524442 GRM4Q14833 912 aa11.8□□□□□ -0.52
TTC39A-213ENST00000524442 MFSD14CQ5VZR4 134 aa11.8□□□□□ -0.52
TTC39A-213ENST00000524442 OLFML2BQ68BL8 750 aa11.8□□□□□ -0.52
TTC39A-213ENST00000524442 CCDC174Q6PII3 467 aa11.8□□□□□ -0.52
TTC39A-213ENST00000524442 SGMS1Q86VZ5 419 aa11.8□□□□□ -0.52
TTC39A-213ENST00000524442 ZNF654Q8IZM8 581 aa11.8□□□□□ -0.52
TTC39A-213ENST00000524442 TRIB2Q92519 343 aa11.8□□□□□ -0.52
TTC39A-213ENST00000524442 AGBL1Q96MI9 1066 aa11.8□□□□□ -0.52
TTC39A-213ENST00000524442 MAF1Q9H063 256 aa11.8□□□□□ -0.52
TTC39A-213ENST00000524442 ACAD9Q9H845 621 aa11.8□□□□□ -0.52
TTC39A-213ENST00000524442 MAD2L2Q9UI95 211 aa11.8□□□□□ -0.52
TTC39A-213ENST00000524442 CCPG1Q9ULG6 757 aa11.8□□□□□ -0.52
TTC39A-213ENST00000524442 SNX14Q9Y5W7 946 aa11.8□□□□□ -0.52
TTC39A-213ENST00000524442 HTTP42858 3142 aa11.8□□□□□ -0.52
TTC39A-213ENST00000524442 RPTORQ8N122 1335 aa11.8□□□□□ -0.52
TTC39A-213ENST00000524442 DOCK3Q8IZD9 2030 aa11.79□□□□□ -0.52
TTC39A-213ENST00000524442 KLRF2D3W0D1 207 aa11.79□□□□□ -0.52
TTC39A-213ENST00000524442 COBLO75128 1261 aa11.79□□□□□ -0.52
TTC39A-213ENST00000524442 CAPN15O75808 1086 aa11.79□□□□□ -0.52
TTC39A-213ENST00000524442 IGHA2P01877 340 aa11.79□□□□□ -0.52
TTC39A-213ENST00000524442 GJB1P08034 283 aa11.79□□□□□ -0.52
TTC39A-213ENST00000524442 ALAS1P13196 640 aa11.79□□□□□ -0.52
TTC39A-213ENST00000524442 CCL5P13501 91 aa11.79□□□□□ -0.52
TTC39A-213ENST00000524442 SMARCA1P28370 1054 aa11.79□□□□□ -0.52
TTC39A-213ENST00000524442 KIF5BP33176 963 aa11.79□□□□□ -0.52
TTC39A-213ENST00000524442 SLC4A3P48751 1232 aa11.79□□□□□ -0.52
TTC39A-213ENST00000524442 RGS19P49795 217 aa11.79□□□□□ -0.52
TTC39A-213ENST00000524442 GNAQP50148 359 aa11.79□□□□□ -0.52
TTC39A-213ENST00000524442 TRAF1Q13077 416 aa11.79□□□□□ -0.52
TTC39A-213ENST00000524442 ADCK5Q3MIX3 580 aa11.79□□□□□ -0.52
TTC39A-213ENST00000524442 MAP3K21Q5TCX8 1036 aa11.79□□□□□ -0.52
TTC39A-213ENST00000524442 SYNE3Q6ZMZ3 975 aa11.79□□□□□ -0.52
TTC39A-213ENST00000524442 NFXL1Q6ZNB6 911 aa11.79□□□□□ -0.52
TTC39A-213ENST00000524442 ADGRF4Q8IZF3 695 aa11.79□□□□□ -0.52
TTC39A-213ENST00000524442 ANKRD35Q8N283 1001 aa11.79□□□□□ -0.52
TTC39A-213ENST00000524442 MSL3Q8N5Y2 521 aaKnown RBP11.79□□□□□ -0.52
TTC39A-213ENST00000524442 CTCFLQ8NI51 663 aaPredicted RBP11.79□□□□□ -0.52
TTC39A-213ENST00000524442 NPLOC4Q8TAT6 608 aa11.79□□□□□ -0.52
TTC39A-213ENST00000524442 DDX11Q96FC9 970 aa11.79□□□□□ -0.52
TTC39A-213ENST00000524442 TRERF1Q96PN7 1200 aa11.79□□□□□ -0.52
TTC39A-213ENST00000524442 LZTS2Q9BRK4 669 aa11.79□□□□□ -0.52
TTC39A-213ENST00000524442 UBA5Q9GZZ9 404 aa11.79□□□□□ -0.52
TTC39A-213ENST00000524442 RNF208Q9H0X6 261 aa11.79□□□□□ -0.52
TTC39A-213ENST00000524442 SENP2Q9HC62 589 aa11.79□□□□□ -0.52
TTC39A-213ENST00000524442 RNF146Q9NTX7 359 aa11.79□□□□□ -0.52
TTC39A-213ENST00000524442 SLC12A7Q9Y666 1083 aa11.79□□□□□ -0.52
TTC39A-213ENST00000524442 PFASO15067 1338 aa11.79□□□□□ -0.52
TTC39A-213ENST00000524442 PLXNB2O15031 1838 aa11.79□□□□□ -0.52
TTC39A-213ENST00000524442 COL11A1P12107 1806 aaPredicted RBP11.79□□□□□ -0.52
TTC39A-213ENST00000524442 DNAJC25-GNG10A0A024R161 153 aa11.78□□□□□ -0.52
TTC39A-213ENST00000524442 DHX16O60231 1041 aaKnown RBP11.78□□□□□ -0.52
TTC39A-213ENST00000524442 MTFR1Q15390 333 aa11.78□□□□□ -0.52
TTC39A-213ENST00000524442 CDC37Q16543 378 aaPredicted RBP11.78□□□□□ -0.52
TTC39A-213ENST00000524442 CCL14Q16627 93 aa11.78□□□□□ -0.52
TTC39A-213ENST00000524442 ZNF792Q3KQV3 632 aa11.78□□□□□ -0.52
TTC39A-213ENST00000524442 BLOC1S2Q6QNY1 142 aa11.78□□□□□ -0.52
TTC39A-213ENST00000524442 ZNF467Q7Z7K2 595 aaPredicted RBP11.78□□□□□ -0.52
TTC39A-213ENST00000524442 STAG2Q8N3U4 1231 aa11.78□□□□□ -0.52
TTC39A-213ENST00000524442 FBXL16Q8N461 479 aa11.78□□□□□ -0.52
TTC39A-213ENST00000524442 MTMR8Q96EF0 704 aa11.78□□□□□ -0.52
TTC39A-213ENST00000524442 JAKMIP1Q96N16 626 aaKnown RBP11.78□□□□□ -0.52
TTC39A-213ENST00000524442 RIOX1Q9H6W3 641 aa11.78□□□□□ -0.52
TTC39A-213ENST00000524442 JMJD4Q9H9V9 463 aa11.78□□□□□ -0.52
TTC39A-213ENST00000524442 HMX1Q9NP08 348 aaPredicted RBP11.78□□□□□ -0.52
TTC39A-213ENST00000524442 PAK6Q9NQU5 681 aaPredicted RBP11.78□□□□□ -0.52
TTC39A-213ENST00000524442 NRBP1Q9UHY1 535 aa11.78□□□□□ -0.52
TTC39A-213ENST00000524442 PGK2P07205 417 aa11.77□□□□□ -0.53
TTC39A-213ENST00000524442 PRKAR2AP13861 404 aaKnown RBP11.77□□□□□ -0.53
TTC39A-213ENST00000524442 GJA8P48165 433 aa11.77□□□□□ -0.53
TTC39A-213ENST00000524442 RCAN1P53805 252 aa11.77□□□□□ -0.53
TTC39A-213ENST00000524442 SNAP25P60880 206 aa11.77□□□□□ -0.53
TTC39A-213ENST00000524442 FGD1P98174 961 aa11.77□□□□□ -0.53
TTC39A-213ENST00000524442 CACNB2Q08289 660 aaPredicted RBP11.77□□□□□ -0.53
TTC39A-213ENST00000524442 RGS22Q8NE09 1264 aa11.77□□□□□ -0.53
TTC39A-213ENST00000524442 NUP133Q8WUM0 1156 aa11.77□□□□□ -0.53
TTC39A-213ENST00000524442 MAML3Q96JK9 1138 aa11.77□□□□□ -0.53
TTC39A-213ENST00000524442 TM6SF1Q9BZW5 370 aa11.77□□□□□ -0.53
TTC39A-213ENST00000524442 UNC93B1Q9H1C4 597 aa11.77□□□□□ -0.53
TTC39A-213ENST00000524442 A1CFQ9NQ94 594 aaKnown RBP11.77□□□□□ -0.53
TTC39A-213ENST00000524442 GPHNQ9NQX3 736 aaPredicted RBP11.77□□□□□ -0.53
TTC39A-213ENST00000524442 HOMER2Q9NSB8 354 aa11.77□□□□□ -0.53
TTC39A-213ENST00000524442 FLRT1Q9NZU1 646 aa11.77□□□□□ -0.53
TTC39A-213ENST00000524442 POTEB2H3BUK9 544 aa11.76□□□□□ -0.53
TTC39A-213ENST00000524442 ZBTB5O15062 677 aa11.76□□□□□ -0.53
TTC39A-213ENST00000524442 MYCP01106 439 aaPredicted RBP11.76□□□□□ -0.53
TTC39A-213ENST00000524442 RPS6KB1P23443 525 aa11.76□□□□□ -0.53
TTC39A-213ENST00000524442 SOX10P56693 466 aa11.76□□□□□ -0.53
TTC39A-213ENST00000524442 ANAPC15P60006 121 aa11.76□□□□□ -0.53
TTC39A-213ENST00000524442 COL9A3Q14050 684 aaPredicted RBP11.76□□□□□ -0.53
TTC39A-213ENST00000524442 PPP2R5BQ15173 497 aa11.76□□□□□ -0.53
TTC39A-213ENST00000524442 QRICH1Q2TAL8 776 aa11.76□□□□□ -0.53
TTC39A-213ENST00000524442 MAMDC4Q6UXC1 1216 aa11.76□□□□□ -0.53
TTC39A-213ENST00000524442 FBXO11Q86XK2 927 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms