RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 ASPRV1Q53RT3 343 aa13.99□□□□□ -0.17
CLN8-207ENST00000524258 NBPF11Q86T75 865 aa13.99□□□□□ -0.17
CLN8-207ENST00000524258 SGMS1Q86VZ5 419 aa13.99□□□□□ -0.17
CLN8-207ENST00000524258 TMEM87BQ96K49 555 aa13.99□□□□□ -0.17
CLN8-207ENST00000524258 FGD4Q96M96 766 aa13.99□□□□□ -0.17
CLN8-207ENST00000524258 LRRC2Q9BYS8 371 aa13.99□□□□□ -0.17
CLN8-207ENST00000524258 CAPN15O75808 1086 aa13.98□□□□□ -0.17
CLN8-207ENST00000524258 SEC24BO95487 1268 aa13.98□□□□□ -0.17
CLN8-207ENST00000524258 HMGCRP04035 888 aa13.98□□□□□ -0.17
CLN8-207ENST00000524258 ICAM1P05362 532 aa13.98□□□□□ -0.17
CLN8-207ENST00000524258 FCER1AP12319 257 aa13.98□□□□□ -0.17
CLN8-207ENST00000524258 CPA1P15085 419 aa13.98□□□□□ -0.17
CLN8-207ENST00000524258 MUM1L1Q5H9M0 696 aa13.98□□□□□ -0.17
CLN8-207ENST00000524258 WDR78Q5VTH9 848 aa13.98□□□□□ -0.17
CLN8-207ENST00000524258 DHX32Q7L7V1 743 aaKnown RBP13.98□□□□□ -0.17
CLN8-207ENST00000524258 CCAR1Q8IX12 1150 aaKnown RBP13.98□□□□□ -0.17
CLN8-207ENST00000524258 ADGRF4Q8IZF3 695 aa13.98□□□□□ -0.17
CLN8-207ENST00000524258 CHST13Q8NET6 341 aa13.98□□□□□ -0.17
CLN8-207ENST00000524258 MAP3K14Q99558 947 aa13.98□□□□□ -0.17
CLN8-207ENST00000524258 UNC93B1Q9H1C4 597 aa13.98□□□□□ -0.17
CLN8-207ENST00000524258 JMJD4Q9H9V9 463 aa13.98□□□□□ -0.17
CLN8-207ENST00000524258 IVNS1ABPQ9Y6Y0 642 aa13.98□□□□□ -0.17
CLN8-207ENST00000524258 CYTH3O43739 400 aa13.97□□□□□ -0.17
CLN8-207ENST00000524258 PGK2P07205 417 aa13.97□□□□□ -0.17
CLN8-207ENST00000524258 PARP1P09874 1014 aaKnown RBP13.97□□□□□ -0.17
CLN8-207ENST00000524258 CCL5P13501 91 aa13.97□□□□□ -0.17
CLN8-207ENST00000524258 SOX10P56693 466 aa13.97□□□□□ -0.17
CLN8-207ENST00000524258 CACNB2Q08289 660 aaPredicted RBP13.97□□□□□ -0.17
CLN8-207ENST00000524258 IKQ13123 557 aaPredicted RBP13.97□□□□□ -0.17
CLN8-207ENST00000524258 KRT32Q14532 448 aa13.97□□□□□ -0.17
CLN8-207ENST00000524258 SART3Q15020 963 aaKnown RBP13.97□□□□□ -0.17
CLN8-207ENST00000524258 TKFCQ3LXA3 575 aa13.97□□□□□ -0.17
CLN8-207ENST00000524258 OLFML2BQ68BL8 750 aa13.97□□□□□ -0.17
CLN8-207ENST00000524258 CCDC174Q6PII3 467 aa13.97□□□□□ -0.17
CLN8-207ENST00000524258 TRMT44Q8IYL2 757 aaKnown RBP13.97□□□□□ -0.17
CLN8-207ENST00000524258 ZNF654Q8IZM8 581 aa13.97□□□□□ -0.17
CLN8-207ENST00000524258 FBXL16Q8N461 479 aa13.97□□□□□ -0.17
CLN8-207ENST00000524258 CLEC4DQ8WXI8 215 aa13.97□□□□□ -0.17
CLN8-207ENST00000524258 IL17RAQ96F46 866 aa13.97□□□□□ -0.17
CLN8-207ENST00000524258 TCEANC2Q96MN5 208 aa13.97□□□□□ -0.17
CLN8-207ENST00000524258 MMP19Q99542 508 aa13.97□□□□□ -0.17
CLN8-207ENST00000524258 AGXT2Q9BYV1 514 aa13.97□□□□□ -0.17
CLN8-207ENST00000524258 RIOX1Q9H6W3 641 aa13.97□□□□□ -0.17
CLN8-207ENST00000524258 PAK6Q9NQU5 681 aaPredicted RBP13.97□□□□□ -0.17
CLN8-207ENST00000524258 KLRF2D3W0D1 207 aa13.96□□□□□ -0.17
CLN8-207ENST00000524258 PPP1R11O60927 126 aaPredicted RBP13.96□□□□□ -0.17
CLN8-207ENST00000524258 ZKSCAN1P17029 563 aaPredicted RBP13.96□□□□□ -0.17
CLN8-207ENST00000524258 C8orf34Q49A92 452 aa13.96□□□□□ -0.17
CLN8-207ENST00000524258 TMTC2Q8N394 836 aa13.96□□□□□ -0.17
CLN8-207ENST00000524258 TRPV1Q8NER1 839 aa13.96□□□□□ -0.17
CLN8-207ENST00000524258 SHISA4Q96DD7 197 aa13.96□□□□□ -0.17
CLN8-207ENST00000524258 MAML3Q96JK9 1138 aa13.96□□□□□ -0.17
CLN8-207ENST00000524258 TRERF1Q96PN7 1200 aa13.96□□□□□ -0.17
CLN8-207ENST00000524258 MYL10Q9BUA6 226 aa13.96□□□□□ -0.17
CLN8-207ENST00000524258 A1CFQ9NQ94 594 aaKnown RBP13.96□□□□□ -0.17
CLN8-207ENST00000524258 RNF146Q9NTX7 359 aa13.96□□□□□ -0.17
CLN8-207ENST00000524258 BRPF3Q9ULD4 1205 aa13.96□□□□□ -0.17
CLN8-207ENST00000524258 ISY1Q9ULR0 285 aaKnown RBP13.96□□□□□ -0.17
CLN8-207ENST00000524258 DIS3Q9Y2L1 958 aaKnown RBP13.96□□□□□ -0.17
CLN8-207ENST00000524258 ASTN1O14525 1302 aa13.95□□□□□ -0.18
CLN8-207ENST00000524258 ERICH2A1L162 156 aa13.95□□□□□ -0.18
CLN8-207ENST00000524258 DDAH1O94760 285 aa13.95□□□□□ -0.18
CLN8-207ENST00000524258 MYCP01106 439 aaPredicted RBP13.95□□□□□ -0.18
CLN8-207ENST00000524258 GJB1P08034 283 aa13.95□□□□□ -0.18
CLN8-207ENST00000524258 ALAS1P13196 640 aa13.95□□□□□ -0.18
CLN8-207ENST00000524258 EN2P19622 333 aaPredicted RBP13.95□□□□□ -0.18
CLN8-207ENST00000524258 QRICH1Q2TAL8 776 aa13.95□□□□□ -0.18
CLN8-207ENST00000524258 DPP9Q86TI2 863 aa13.95□□□□□ -0.18
CLN8-207ENST00000524258 FAM133AQ8N9E0 248 aa13.95□□□□□ -0.18
CLN8-207ENST00000524258 JAKMIP1Q96N16 626 aaKnown RBP13.95□□□□□ -0.18
CLN8-207ENST00000524258 ACAD9Q9H845 621 aa13.95□□□□□ -0.18
CLN8-207ENST00000524258 FAM217BQ9NTX9 383 aaPredicted RBP13.95□□□□□ -0.18
CLN8-207ENST00000524258 FBXO40Q9UH90 709 aa13.95□□□□□ -0.18
CLN8-207ENST00000524258 CCPG1Q9ULG6 757 aa13.95□□□□□ -0.18
CLN8-207ENST00000524258 ZNFX1Q9P2E3 1918 aaKnown RBP13.95□□□□□ -0.18
CLN8-207ENST00000524258 RPTORQ8N122 1335 aa13.94□□□□□ -0.18
CLN8-207ENST00000524258 NFIBO00712 420 aa13.94□□□□□ -0.18
CLN8-207ENST00000524258 OPLAHO14841 1288 aa13.94□□□□□ -0.18
CLN8-207ENST00000524258 HMGB1P09429 215 aaKnown RBP13.94□□□□□ -0.18
CLN8-207ENST00000524258 PRKAR2AP13861 404 aaKnown RBP13.94□□□□□ -0.18
CLN8-207ENST00000524258 CYP2C19P33261 490 aa13.94□□□□□ -0.18
CLN8-207ENST00000524258 GJA8P48165 433 aa13.94□□□□□ -0.18
CLN8-207ENST00000524258 UBXN2AP68543 259 aa13.94□□□□□ -0.18
CLN8-207ENST00000524258 CNTN2Q02246 1040 aa13.94□□□□□ -0.18
CLN8-207ENST00000524258 KCTD2Q14681 263 aa13.94□□□□□ -0.18
CLN8-207ENST00000524258 CDC37Q16543 378 aaPredicted RBP13.94□□□□□ -0.18
CLN8-207ENST00000524258 MAMDC4Q6UXC1 1216 aa13.94□□□□□ -0.18
CLN8-207ENST00000524258 UBE2Q1Q7Z7E8 422 aa13.94□□□□□ -0.18
CLN8-207ENST00000524258 CATIPQ7Z7H3 387 aa13.94□□□□□ -0.18
CLN8-207ENST00000524258 TM6SF1Q9BZW5 370 aa13.94□□□□□ -0.18
CLN8-207ENST00000524258 CRISPLD2Q9H0B8 497 aa13.94□□□□□ -0.18
CLN8-207ENST00000524258 RNF208Q9H0X6 261 aa13.94□□□□□ -0.18
CLN8-207ENST00000524258 CWC22Q9HCG8 908 aaKnown RBP13.94□□□□□ -0.18
CLN8-207ENST00000524258 ZSWIM6Q9HCJ5 1215 aa13.94□□□□□ -0.18
CLN8-207ENST00000524258 HOMER2Q9NSB8 354 aa13.94□□□□□ -0.18
CLN8-207ENST00000524258 CYP39A1Q9NYL5 469 aa13.94□□□□□ -0.18
CLN8-207ENST00000524258 BIN2Q9UBW5 565 aaPredicted RBP13.94□□□□□ -0.18
CLN8-207ENST00000524258 CTDP1Q9Y5B0 961 aaPredicted RBP13.94□□□□□ -0.18
CLN8-207ENST00000524258 SOWAHBA6NEL2 793 aa13.93□□□□□ -0.18
CLN8-207ENST00000524258 SNAI1O95863 264 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms