RNA–Protein interactions for RNA: ENST00000524094.1

LINC01339-204, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3

Gene LINC01339, Length 269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-204ENST00000524094 PRR33A8MZF0 331 aa3.89□□□□□ -1.79
LINC01339-204ENST00000524094 CLEC3AO75596 197 aa3.89□□□□□ -1.79
LINC01339-204ENST00000524094 RAPGEF3O95398 923 aa3.89□□□□□ -1.79
LINC01339-204ENST00000524094 FGFR1P11362 822 aa3.89□□□□□ -1.79
LINC01339-204ENST00000524094 SRFP11831 508 aa3.89□□□□□ -1.79
LINC01339-204ENST00000524094 GLB1P16278 677 aa3.89□□□□□ -1.79
LINC01339-204ENST00000524094 GBP1P32455 592 aa3.89□□□□□ -1.79
LINC01339-204ENST00000524094 CTSKP43235 329 aa3.89□□□□□ -1.79
LINC01339-204ENST00000524094 CEBPAP49715 358 aaPredicted RBP3.89□□□□□ -1.79
LINC01339-204ENST00000524094 PABPC4Q13310 644 aaKnown RBP eCLIP3.89□□□□□ -1.79
LINC01339-204ENST00000524094 CDK5R2Q13319 367 aa3.89□□□□□ -1.79
LINC01339-204ENST00000524094 TCEA2Q15560 299 aa3.89□□□□□ -1.79
LINC01339-204ENST00000524094 BBS9Q3SYG4 887 aa3.89□□□□□ -1.79
LINC01339-204ENST00000524094 CDC37L1Q7L3B6 337 aa3.89□□□□□ -1.79
LINC01339-204ENST00000524094 KRT26Q7Z3Y9 468 aa3.89□□□□□ -1.79
LINC01339-204ENST00000524094 FAM20CQ8IXL6 584 aa3.89□□□□□ -1.79
LINC01339-204ENST00000524094 DHX37Q8IY37 1157 aaKnown RBP3.89□□□□□ -1.79
LINC01339-204ENST00000524094 ANKRD13AQ8IZ07 590 aa3.89□□□□□ -1.79
LINC01339-204ENST00000524094 LRRN4CLQ8ND94 238 aa3.89□□□□□ -1.79
LINC01339-204ENST00000524094 AGBL5Q8NDL9 886 aa3.89□□□□□ -1.79
LINC01339-204ENST00000524094 ZSWIM2Q8NEG5 633 aa3.89□□□□□ -1.79
LINC01339-204ENST00000524094 NINJ1Q92982 152 aa3.89□□□□□ -1.79
LINC01339-204ENST00000524094 BRF1Q92994 677 aa3.89□□□□□ -1.79
LINC01339-204ENST00000524094 DUSP23Q9BVJ7 150 aa3.89□□□□□ -1.79
LINC01339-204ENST00000524094 MTFR1LQ9H019 292 aa3.89□□□□□ -1.79
LINC01339-204ENST00000524094 SPC25Q9HBM1 224 aa3.89□□□□□ -1.79
LINC01339-204ENST00000524094 NCOA5Q9HCD5 579 aaKnown RBP3.89□□□□□ -1.79
LINC01339-204ENST00000524094 TRIM39Q9HCM9 518 aa3.89□□□□□ -1.79
LINC01339-204ENST00000524094 PRDM10Q9NQV6 1147 aa3.89□□□□□ -1.79
LINC01339-204ENST00000524094 NOP58Q9Y2X3 529 aaKnown RBP3.89□□□□□ -1.79
LINC01339-204ENST00000524094 MRPS23Q9Y3D9 190 aaKnown RBP3.89□□□□□ -1.79
LINC01339-204ENST00000524094 SHISA3A0PJX4 238 aa3.88□□□□□ -1.79
LINC01339-204ENST00000524094 WASH4PA8MWX3 477 aa3.88□□□□□ -1.79
LINC01339-204ENST00000524094 FOXD2O60548 495 aaPredicted RBP3.88□□□□□ -1.79
LINC01339-204ENST00000524094 DNAJC6O75061 913 aa3.88□□□□□ -1.79
LINC01339-204ENST00000524094 RAB11FIP3O75154 756 aa3.88□□□□□ -1.79
LINC01339-204ENST00000524094 PABPC1P11940 636 aaKnown RBP3.88□□□□□ -1.79
LINC01339-204ENST00000524094 BMP3P12645 472 aa3.88□□□□□ -1.79
LINC01339-204ENST00000524094 NCLP19338 710 aaKnown RBP3.88□□□□□ -1.79
LINC01339-204ENST00000524094 MAP4P27816 1152 aaKnown RBP3.88□□□□□ -1.79
LINC01339-204ENST00000524094 MSMPQ1L6U9 139 aa3.88□□□□□ -1.79
LINC01339-204ENST00000524094 SV2CQ496J9 727 aa3.88□□□□□ -1.79
LINC01339-204ENST00000524094 TRIM61Q5EBN2 209 aa3.88□□□□□ -1.79
LINC01339-204ENST00000524094 ZC3H12BQ5HYM0 836 aaKnown RBP3.88□□□□□ -1.79
LINC01339-204ENST00000524094 SLC35F1Q5T1Q4 408 aa3.88□□□□□ -1.79
LINC01339-204ENST00000524094 DIEXFQ68CQ4 756 aaKnown RBP3.88□□□□□ -1.79
LINC01339-204ENST00000524094 HEATR6Q6AI08 1181 aaKnown RBP3.88□□□□□ -1.79
LINC01339-204ENST00000524094 FDX2Q6P4F2 183 aa3.88□□□□□ -1.79
LINC01339-204ENST00000524094 TMC3Q7Z5M5 1100 aa3.88□□□□□ -1.79
LINC01339-204ENST00000524094 STRA8Q7Z7C7 330 aa3.88□□□□□ -1.79
LINC01339-204ENST00000524094 RNF180Q86T96 592 aa3.88□□□□□ -1.79
LINC01339-204ENST00000524094 ANKLE2Q86XL3 938 aa3.88□□□□□ -1.79
LINC01339-204ENST00000524094 TRIM59Q8IWR1 403 aa3.88□□□□□ -1.79
LINC01339-204ENST00000524094 SCUBE1Q8IWY4 988 aa3.88□□□□□ -1.79
LINC01339-204ENST00000524094 LRRC47Q8N1G4 583 aaKnown RBP3.88□□□□□ -1.79
LINC01339-204ENST00000524094 SYNPOQ8N3V7 929 aa3.88□□□□□ -1.79
LINC01339-204ENST00000524094 BVESQ8NE79 360 aa3.88□□□□□ -1.79
LINC01339-204ENST00000524094 GSTCDQ8NEC7 633 aa3.88□□□□□ -1.79
LINC01339-204ENST00000524094 SYTL5Q8TDW5 730 aaPredicted RBP3.88□□□□□ -1.79
LINC01339-204ENST00000524094 DCAF11Q8TEB1 546 aa3.88□□□□□ -1.79
LINC01339-204ENST00000524094 RNF141Q8WVD5 230 aa3.88□□□□□ -1.79
LINC01339-204ENST00000524094 FAM168AQ92567 244 aa3.88□□□□□ -1.79
LINC01339-204ENST00000524094 SLC26A8Q96RN1 970 aa3.88□□□□□ -1.79
LINC01339-204ENST00000524094 MIPEPQ99797 713 aa3.88□□□□□ -1.79
LINC01339-204ENST00000524094 DUSP15Q9H1R2 295 aaPredicted RBP3.88□□□□□ -1.79
LINC01339-204ENST00000524094 PIM2Q9P1W9 311 aa3.88□□□□□ -1.79
LINC01339-204ENST00000524094 PRKAB1Q9Y478 270 aa3.88□□□□□ -1.79
LINC01339-204ENST00000524094 MROH2BQ7Z745 1585 aa3.88□□□□□ -1.79
LINC01339-204ENST00000524094 RSF1Q96T23 1441 aaPredicted RBP3.87□□□□□ -1.79
LINC01339-204ENST00000524094 TRBV23-1A0A0A0MS06 115 aa3.87□□□□□ -1.79
LINC01339-204ENST00000524094 CCDC163A0A0D9SF12 145 aa3.87□□□□□ -1.79
LINC01339-204ENST00000524094 BLACEA4D250 179 aa3.87□□□□□ -1.79
LINC01339-204ENST00000524094 PLD2O14939 933 aa3.87□□□□□ -1.79
LINC01339-204ENST00000524094 PRODHO43272 600 aa3.87□□□□□ -1.79
LINC01339-204ENST00000524094 VAMP4O75379 141 aa3.87□□□□□ -1.79
LINC01339-204ENST00000524094 DNAJC8O75937 253 aaPredicted RBP3.87□□□□□ -1.79
LINC01339-204ENST00000524094 EYA4O95677 639 aa3.87□□□□□ -1.79
LINC01339-204ENST00000524094 TSPAN15O95858 294 aa3.87□□□□□ -1.79
LINC01339-204ENST00000524094 SCG5P05408 212 aa3.87□□□□□ -1.79
LINC01339-204ENST00000524094 RAB6AP20340 208 aa3.87□□□□□ -1.79
LINC01339-204ENST00000524094 GFRA1P56159 465 aa3.87□□□□□ -1.79
LINC01339-204ENST00000524094 FNDC3BQ53EP0 1204 aaKnown RBP3.87□□□□□ -1.79
LINC01339-204ENST00000524094 FGD2Q7Z6J4 655 aa3.87□□□□□ -1.79
LINC01339-204ENST00000524094 AMIGO3Q86WK7 504 aa3.87□□□□□ -1.79
LINC01339-204ENST00000524094 CCDC144CPQ8IYA2 1237 aa3.87□□□□□ -1.79
LINC01339-204ENST00000524094 SMARCC1Q92922 1105 aaPredicted RBP3.87□□□□□ -1.79
LINC01339-204ENST00000524094 BORCS6Q96GS4 357 aa3.87□□□□□ -1.79
LINC01339-204ENST00000524094 CGGBP1Q9UFW8 167 aaPredicted RBP3.87□□□□□ -1.79
LINC01339-204ENST00000524094 TMEFF2Q9UIK5 374 aaPredicted RBP3.87□□□□□ -1.79
LINC01339-204ENST00000524094 ZNF281Q9Y2X9 895 aa3.87□□□□□ -1.79
LINC01339-204ENST00000524094 DAGLAQ9Y4D2 1042 aa3.87□□□□□ -1.79
LINC01339-204ENST00000524094 SRCAPQ6ZRS2 3230 aa3.86□□□□□ -1.79
LINC01339-204ENST00000524094 TRAV20A0A0B4J274 112 aa3.86□□□□□ -1.79
LINC01339-204ENST00000524094 IQCA1LA6NCM1 817 aa3.86□□□□□ -1.79
LINC01339-204ENST00000524094 STAT3P40763 770 aa3.86□□□□□ -1.79
LINC01339-204ENST00000524094 CDKN1CP49918 316 aaPredicted RBP3.86□□□□□ -1.79
LINC01339-204ENST00000524094 EVA1CP58658 441 aa3.86□□□□□ -1.79
LINC01339-204ENST00000524094 HSP90AA2PQ14568 343 aaPredicted RBP3.86□□□□□ -1.79
LINC01339-204ENST00000524094 GTF2IRD2BQ6EKJ0 949 aa3.86□□□□□ -1.79
LINC01339-204ENST00000524094 OGFOD3Q6PK18 319 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms