RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 ZNRF3Q9ULT6 936 aa6.84□□□□□ -1.31
CTNNA1-239ENST00000523685 ATP6V0A2Q9Y487 856 aa6.84□□□□□ -1.31
CTNNA1-239ENST00000523685 ADAMTSL1Q8N6G6 1762 aa6.84□□□□□ -1.31
CTNNA1-239ENST00000523685 IBTKQ9P2D0 1353 aaPredicted RBP6.83□□□□□ -1.32
CTNNA1-239ENST00000523685 RIPK4P57078 832 aa6.83□□□□□ -1.32
CTNNA1-239ENST00000523685 TAF1CQ15572 869 aaPredicted RBP6.83□□□□□ -1.32
CTNNA1-239ENST00000523685 CIAPIN1Q6FI81 312 aa6.83□□□□□ -1.32
CTNNA1-239ENST00000523685 DDX46Q7L014 1031 aaKnown RBP6.83□□□□□ -1.32
CTNNA1-239ENST00000523685 COPS6Q7L5N1 327 aa6.83□□□□□ -1.32
CTNNA1-239ENST00000523685 SUPT20HQ8NEM7 779 aa6.83□□□□□ -1.32
CTNNA1-239ENST00000523685 XAGE3Q8WTP9 111 aa6.83□□□□□ -1.32
CTNNA1-239ENST00000523685 PNNQ9H307 717 aaKnown RBP6.83□□□□□ -1.32
CTNNA1-239ENST00000523685 SH2B1Q9NRF2 756 aaPredicted RBP6.83□□□□□ -1.32
CTNNA1-239ENST00000523685 TRMT112Q9UI30 125 aaKnown RBP6.83□□□□□ -1.32
CTNNA1-239ENST00000523685 PPM1HQ9ULR3 514 aa6.83□□□□□ -1.32
CTNNA1-239ENST00000523685 SOX13Q9UN79 622 aa6.83□□□□□ -1.32
CTNNA1-239ENST00000523685 LAS1LQ9Y4W2 734 aaKnown RBP6.83□□□□□ -1.32
CTNNA1-239ENST00000523685 LTBP1Q14766 1721 aa6.83□□□□□ -1.32
CTNNA1-239ENST00000523685 RIC1Q4ADV7 1423 aa6.83□□□□□ -1.32
CTNNA1-239ENST00000523685 SHTN1A0MZ66 631 aa6.82□□□□□ -1.32
CTNNA1-239ENST00000523685 SCAMP3O14828 347 aaKnown RBP6.82□□□□□ -1.32
CTNNA1-239ENST00000523685 BBOX1O75936 387 aa6.82□□□□□ -1.32
CTNNA1-239ENST00000523685 ARHGEF15O94989 841 aa6.82□□□□□ -1.32
CTNNA1-239ENST00000523685 TNIP1Q15025 636 aa6.82□□□□□ -1.32
CTNNA1-239ENST00000523685 RPS26P11Q5JNZ5 115 aaPredicted RBP6.82□□□□□ -1.32
CTNNA1-239ENST00000523685 MEI1Q5TIA1 1274 aa6.82□□□□□ -1.32
CTNNA1-239ENST00000523685 DLK2Q6UY11 383 aa6.82□□□□□ -1.32
CTNNA1-239ENST00000523685 VN1R5Q7Z5H4 357 aa6.82□□□□□ -1.32
CTNNA1-239ENST00000523685 SAPCD2Q86UD0 394 aa6.82□□□□□ -1.32
CTNNA1-239ENST00000523685 USP48Q86UV5 1035 aa6.82□□□□□ -1.32
CTNNA1-239ENST00000523685 NLRP10Q86W26 655 aa6.82□□□□□ -1.32
CTNNA1-239ENST00000523685 WFDC8Q8IUA0 241 aa6.82□□□□□ -1.32
CTNNA1-239ENST00000523685 SP8Q8IXZ3 490 aa6.82□□□□□ -1.32
CTNNA1-239ENST00000523685 CLEC4MQ9H2X3 399 aaPredicted RBP6.82□□□□□ -1.32
CTNNA1-239ENST00000523685 ZNF576Q9H609 170 aa6.82□□□□□ -1.32
CTNNA1-239ENST00000523685 TTF2Q9UNY4 1162 aaKnown RBP6.82□□□□□ -1.32
CTNNA1-239ENST00000523685 PPME1Q9Y570 386 aa6.82□□□□□ -1.32
CTNNA1-239ENST00000523685 LAMB4A4D0S4 1761 aa6.82□□□□□ -1.32
CTNNA1-239ENST00000523685 H7C1D1 291 aa6.81□□□□□ -1.32
CTNNA1-239ENST00000523685 MAP2K2P36507 400 aa6.81□□□□□ -1.32
CTNNA1-239ENST00000523685 DGKGP49619 791 aa6.81□□□□□ -1.32
CTNNA1-239ENST00000523685 ST13P50502 369 aaKnown RBP6.81□□□□□ -1.32
CTNNA1-239ENST00000523685 PCDH1Q08174 1060 aa6.81□□□□□ -1.32
CTNNA1-239ENST00000523685 KIAA2012Q0VF49 1180 aa6.81□□□□□ -1.32
CTNNA1-239ENST00000523685 GRAPQ13588 217 aa6.81□□□□□ -1.32
CTNNA1-239ENST00000523685 KRT24Q2M2I5 525 aa6.81□□□□□ -1.32
CTNNA1-239ENST00000523685 HSP90AB3PQ58FF7 597 aa6.81□□□□□ -1.32
CTNNA1-239ENST00000523685 SLC10A5Q5PT55 438 aa6.81□□□□□ -1.32
CTNNA1-239ENST00000523685 CDC37L1Q7L3B6 337 aa6.81□□□□□ -1.32
CTNNA1-239ENST00000523685 LRP10Q7Z4F1 713 aa6.81□□□□□ -1.32
CTNNA1-239ENST00000523685 CCDC146Q8IYE0 955 aa6.81□□□□□ -1.32
CTNNA1-239ENST00000523685 GRAPLQ8TC17 118 aaPredicted RBP6.81□□□□□ -1.32
CTNNA1-239ENST00000523685 RTFDC1Q9BY42 306 aaPredicted RBP6.81□□□□□ -1.32
CTNNA1-239ENST00000523685 MCOLN1Q9GZU1 580 aa6.81□□□□□ -1.32
CTNNA1-239ENST00000523685 VPS33BQ9H267 617 aa6.81□□□□□ -1.32
CTNNA1-239ENST00000523685 DBNDD1Q9H9R9 158 aa6.81□□□□□ -1.32
CTNNA1-239ENST00000523685 CNOT7Q9UIV1 285 aaKnown RBP6.81□□□□□ -1.32
CTNNA1-239ENST00000523685 NUP98P52948 1817 aa6.8□□□□□ -1.32
CTNNA1-239ENST00000523685 SH3TC1Q8TE82 1336 aa6.8□□□□□ -1.32
CTNNA1-239ENST00000523685 KDM3BQ7LBC6 1761 aa6.8□□□□□ -1.32
CTNNA1-239ENST00000523685 YDJCA8MPS7 323 aa6.8□□□□□ -1.32
CTNNA1-239ENST00000523685 PSMD14O00487 310 aa6.8□□□□□ -1.32
CTNNA1-239ENST00000523685 TCF3P15923 654 aa6.8□□□□□ -1.32
CTNNA1-239ENST00000523685 HOXB4P17483 251 aaPredicted RBP6.8□□□□□ -1.32
CTNNA1-239ENST00000523685 EPHA1P21709 976 aa6.8□□□□□ -1.32
CTNNA1-239ENST00000523685 CDC25BP30305 580 aa6.8□□□□□ -1.32
CTNNA1-239ENST00000523685 HUNKP57058 714 aa6.8□□□□□ -1.32
CTNNA1-239ENST00000523685 TCIRG1Q13488 830 aa6.8□□□□□ -1.32
CTNNA1-239ENST00000523685 COL9A3Q14050 684 aaPredicted RBP6.8□□□□□ -1.32
CTNNA1-239ENST00000523685 IKBKEQ14164 716 aa6.8□□□□□ -1.32
CTNNA1-239ENST00000523685 ZNF423Q2M1K9 1284 aa6.8□□□□□ -1.32
CTNNA1-239ENST00000523685 TBC1D10BQ4KMP7 808 aaPredicted RBP6.8□□□□□ -1.32
CTNNA1-239ENST00000523685 ZSCAN1Q8NBB4 408 aa6.8□□□□□ -1.32
CTNNA1-239ENST00000523685 CEP44Q9C0F1 390 aa6.8□□□□□ -1.32
CTNNA1-239ENST00000523685 SEC31BQ9NQW1 1179 aa6.8□□□□□ -1.32
CTNNA1-239ENST00000523685 METTL5Q9NRN9 209 aaKnown RBP6.8□□□□□ -1.32
CTNNA1-239ENST00000523685 CHPF2Q9P2E5 772 aa6.8□□□□□ -1.32
CTNNA1-239ENST00000523685 ADM5C9JUS6 153 aa6.79□□□□□ -1.32
CTNNA1-239ENST00000523685 H3BRJ5 948 aa6.79□□□□□ -1.32
CTNNA1-239ENST00000523685 LINC01387J3KSC0 135 aa6.79□□□□□ -1.32
CTNNA1-239ENST00000523685 CA12O43570 354 aa6.79□□□□□ -1.32
CTNNA1-239ENST00000523685 ESRRAP11474 423 aaPredicted RBP6.79□□□□□ -1.32
CTNNA1-239ENST00000523685 NID1P14543 1247 aa6.79□□□□□ -1.32
CTNNA1-239ENST00000523685 ZNF76P36508 570 aa6.79□□□□□ -1.32
CTNNA1-239ENST00000523685 TMPOP42166 694 aaKnown RBP6.79□□□□□ -1.32
CTNNA1-239ENST00000523685 LMOD3Q0VAK6 560 aa6.79□□□□□ -1.32
CTNNA1-239ENST00000523685 FAM117BQ6P1L5 589 aa6.79□□□□□ -1.32
CTNNA1-239ENST00000523685 SV2BQ7L1I2 683 aa6.79□□□□□ -1.32
CTNNA1-239ENST00000523685 KRT26Q7Z3Y9 468 aa6.79□□□□□ -1.32
CTNNA1-239ENST00000523685 DMRTC2Q8IXT2 367 aaPredicted RBP6.79□□□□□ -1.32
CTNNA1-239ENST00000523685 CELF1Q92879 486 aaKnown RBP6.79□□□□□ -1.32
CTNNA1-239ENST00000523685 FAM89AQ96GI7 184 aa6.79□□□□□ -1.32
CTNNA1-239ENST00000523685 KCNQ5Q9NR82 932 aa6.79□□□□□ -1.32
CTNNA1-239ENST00000523685 IGSF5Q9NSI5 407 aa6.79□□□□□ -1.32
CTNNA1-239ENST00000523685 CDHR2Q9BYE9 1310 aa6.78□□□□□ -1.32
CTNNA1-239ENST00000523685 SOX1O00570 391 aaPredicted RBP6.78□□□□□ -1.32
CTNNA1-239ENST00000523685 ECE2O60344 883 aa6.78□□□□□ -1.32
CTNNA1-239ENST00000523685 FBXO24O75426 580 aa6.78□□□□□ -1.32
CTNNA1-239ENST00000523685 B3GALT4O96024 378 aa6.78□□□□□ -1.32
CTNNA1-239ENST00000523685 LORP23490 312 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms