RNA–Protein interactions for RNA: ENST00000523406.1

LINC00534-203, long intergenic non-protein coding RNA 534, humanhuman

TSL 3 BASIC

Gene LINC00534, Length 812 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-203ENST00000523406 CPDO75976 1380 aa8.08□□□□□ -1.12
LINC00534-203ENST00000523406 PHRF1Q9P1Y6 1649 aaKnown RBP8.07□□□□□ -1.12
LINC00534-203ENST00000523406 ABCC4O15439 1325 aa8.07□□□□□ -1.12
LINC00534-203ENST00000523406 MED1Q15648 1581 aaPredicted RBP8.07□□□□□ -1.12
LINC00534-203ENST00000523406 FAM181BA6NEQ2 426 aa8.07□□□□□ -1.12
LINC00534-203ENST00000523406 TMPRSS2O15393 492 aa8.07□□□□□ -1.12
LINC00534-203ENST00000523406 TIAF1O95411 115 aa8.07□□□□□ -1.12
LINC00534-203ENST00000523406 BPNT1O95861 308 aa8.07□□□□□ -1.12
LINC00534-203ENST00000523406 FGRP09769 529 aa8.07□□□□□ -1.12
LINC00534-203ENST00000523406 DNAJA1P31689 397 aaKnown RBP8.07□□□□□ -1.12
LINC00534-203ENST00000523406 EVA1CP58658 441 aa8.07□□□□□ -1.12
LINC00534-203ENST00000523406 HDAC1Q13547 482 aaPredicted RBP8.07□□□□□ -1.12
LINC00534-203ENST00000523406 SF3A1Q15459 793 aaKnown RBP8.07□□□□□ -1.12
LINC00534-203ENST00000523406 WIPI1Q5MNZ9 446 aaPredicted RBP8.07□□□□□ -1.12
LINC00534-203ENST00000523406 CYFIP1Q7L576 1253 aa8.07□□□□□ -1.12
LINC00534-203ENST00000523406 SKAP1Q86WV1 359 aa8.07□□□□□ -1.12
LINC00534-203ENST00000523406 AGGF1Q8N302 714 aaeCLIP8.07□□□□□ -1.12
LINC00534-203ENST00000523406 PRKAG2Q9UGJ0 569 aa8.07□□□□□ -1.12
LINC00534-203ENST00000523406 PPP1R9AQ9ULJ8 1098 aa8.07□□□□□ -1.12
LINC00534-203ENST00000523406 EFR3BQ9Y2G0 817 aa8.07□□□□□ -1.12
LINC00534-203ENST00000523406 POLR3KQ9Y2Y1 108 aaPredicted RBP8.07□□□□□ -1.12
LINC00534-203ENST00000523406 ALS2Q96Q42 1657 aa8.07□□□□□ -1.12
LINC00534-203ENST00000523406 C9orf172C9J069 976 aa8.06□□□□□ -1.12
LINC00534-203ENST00000523406 HSP90AB1P08238 724 aaKnown RBP8.06□□□□□ -1.12
LINC00534-203ENST00000523406 ID3Q02535 119 aa8.06□□□□□ -1.12
LINC00534-203ENST00000523406 RING1Q06587 406 aa8.06□□□□□ -1.12
LINC00534-203ENST00000523406 INTS3Q68E01 1043 aaKnown RBP8.06□□□□□ -1.12
LINC00534-203ENST00000523406 Q6ZS46 218 aa8.06□□□□□ -1.12
LINC00534-203ENST00000523406 TOM1L2Q6ZVM7 507 aa8.06□□□□□ -1.12
LINC00534-203ENST00000523406 HDXQ7Z353 690 aa8.06□□□□□ -1.12
LINC00534-203ENST00000523406 NACC1Q96RE7 527 aa8.06□□□□□ -1.12
LINC00534-203ENST00000523406 TANGO6Q9C0B7 1094 aa8.06□□□□□ -1.12
LINC00534-203ENST00000523406 CYP4F12Q9HCS2 524 aa8.06□□□□□ -1.12
LINC00534-203ENST00000523406 BRMS1Q9HCU9 246 aa8.06□□□□□ -1.12
LINC00534-203ENST00000523406 CRIM1Q9NZV1 1036 aa8.06□□□□□ -1.12
LINC00534-203ENST00000523406 TACC3Q9Y6A5 838 aa8.06□□□□□ -1.12
LINC00534-203ENST00000523406 CEMIPQ8WUJ3 1361 aa8.06□□□□□ -1.12
LINC00534-203ENST00000523406 NCAPD2Q15021 1401 aa8.05□□□□□ -1.12
LINC00534-203ENST00000523406 DCDC2CA8MYV0 355 aa8.05□□□□□ -1.12
LINC00534-203ENST00000523406 ALX3O95076 343 aa8.05□□□□□ -1.12
LINC00534-203ENST00000523406 APBA3O96018 575 aa8.05□□□□□ -1.12
LINC00534-203ENST00000523406 HOXB7P09629 217 aa8.05□□□□□ -1.12
LINC00534-203ENST00000523406 ADH5P11766 374 aa8.05□□□□□ -1.12
LINC00534-203ENST00000523406 EIF2S2P20042 333 aaKnown RBP8.05□□□□□ -1.12
LINC00534-203ENST00000523406 ANP32AP39687 249 aaKnown RBP8.05□□□□□ -1.12
LINC00534-203ENST00000523406 NASPP49321 788 aaPredicted RBP8.05□□□□□ -1.12
LINC00534-203ENST00000523406 CCT4P50991 539 aaKnown RBP8.05□□□□□ -1.12
LINC00534-203ENST00000523406 EIF4A1P60842 406 aaKnown RBP8.05□□□□□ -1.12
LINC00534-203ENST00000523406 ERVK-24P63145 666 aa8.05□□□□□ -1.12
LINC00534-203ENST00000523406 NRG1Q02297 640 aaPredicted RBP8.05□□□□□ -1.12
LINC00534-203ENST00000523406 SOX4Q06945 474 aaPredicted RBP8.05□□□□□ -1.12
LINC00534-203ENST00000523406 ANKRD34AQ69YU3 496 aa8.05□□□□□ -1.12
LINC00534-203ENST00000523406 SLC4A10Q6U841 1118 aa8.05□□□□□ -1.12
LINC00534-203ENST00000523406 MCF2L2Q86YR7 1114 aa8.05□□□□□ -1.12
LINC00534-203ENST00000523406 IFNL2Q8IZJ0 200 aa8.05□□□□□ -1.12
LINC00534-203ENST00000523406 REXO1Q8N1G1 1221 aaKnown RBP8.05□□□□□ -1.12
LINC00534-203ENST00000523406 ELMO3Q96BJ8 720 aa8.05□□□□□ -1.12
LINC00534-203ENST00000523406 DRC1Q96MC2 740 aa8.05□□□□□ -1.12
LINC00534-203ENST00000523406 GSX1Q9H4S2 264 aaPredicted RBP8.05□□□□□ -1.12
LINC00534-203ENST00000523406 AKTIPQ9H8T0 292 aa8.05□□□□□ -1.12
LINC00534-203ENST00000523406 XIRP1Q702N8 1843 aaKnown RBP8.04□□□□□ -1.12
LINC00534-203ENST00000523406 ZNF165P49910 485 aa8.04□□□□□ -1.12
LINC00534-203ENST00000523406 ADGRE1Q14246 886 aa8.04□□□□□ -1.12
LINC00534-203ENST00000523406 G2E3Q7L622 706 aa8.04□□□□□ -1.12
LINC00534-203ENST00000523406 C12orf40Q86WS4 652 aa8.04□□□□□ -1.12
LINC00534-203ENST00000523406 FANCD2OSQ96PS1 177 aa8.04□□□□□ -1.12
LINC00534-203ENST00000523406 EHMT1Q9H9B1 1298 aa8.04□□□□□ -1.12
LINC00534-203ENST00000523406 DISC1Q9NRI5 854 aa8.04□□□□□ -1.12
LINC00534-203ENST00000523406 USP21Q9UK80 565 aa8.04□□□□□ -1.12
LINC00534-203ENST00000523406 HIF3AQ9Y2N7 669 aa8.04□□□□□ -1.12
LINC00534-203ENST00000523406 WDR17Q8IZU2 1322 aa8.03□□□□□ -1.12
LINC00534-203ENST00000523406 ABCC6O95255 1503 aa8.03□□□□□ -1.12
LINC00534-203ENST00000523406 IGSF3O75054 1194 aa8.03□□□□□ -1.12
LINC00534-203ENST00000523406 ATE1O95260 518 aa8.03□□□□□ -1.12
LINC00534-203ENST00000523406 DRD2P14416 443 aa8.03□□□□□ -1.12
LINC00534-203ENST00000523406 PHKG2P15735 406 aa8.03□□□□□ -1.12
LINC00534-203ENST00000523406 NOS3P29474 1203 aa8.03□□□□□ -1.12
LINC00534-203ENST00000523406 CLCQ05315 142 aa8.03□□□□□ -1.12
LINC00534-203ENST00000523406 MBTPS1Q14703 1052 aa8.03□□□□□ -1.12
LINC00534-203ENST00000523406 WFDC12Q8WWY7 111 aa8.03□□□□□ -1.12
LINC00534-203ENST00000523406 GCC1Q96CN9 775 aa8.03□□□□□ -1.12
LINC00534-203ENST00000523406 DCAF5Q96JK2 942 aa8.03□□□□□ -1.12
LINC00534-203ENST00000523406 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.03□□□□□ -1.12
LINC00534-203ENST00000523406 STK17AQ9UEE5 414 aa8.03□□□□□ -1.12
LINC00534-203ENST00000523406 CSADQ9Y600 493 aa8.03□□□□□ -1.12
LINC00534-203ENST00000523406 OVOS2A0A0G2JMS6 1433 aa8.03□□□□□ -1.12
LINC00534-203ENST00000523406 PLEKHG2Q9H7P9 1386 aa8.02□□□□□ -1.13
LINC00534-203ENST00000523406 KCNQ3O43525 872 aa8.02□□□□□ -1.13
LINC00534-203ENST00000523406 MCM4P33991 863 aa8.02□□□□□ -1.13
LINC00534-203ENST00000523406 NTF4P34130 210 aa8.02□□□□□ -1.13
LINC00534-203ENST00000523406 FDX2Q6P4F2 183 aa8.02□□□□□ -1.13
LINC00534-203ENST00000523406 SMC5Q8IY18 1101 aa8.02□□□□□ -1.13
LINC00534-203ENST00000523406 TTC5Q8N0Z6 440 aa8.02□□□□□ -1.13
LINC00534-203ENST00000523406 C12orf50Q8NA57 414 aaPredicted RBP8.02□□□□□ -1.13
LINC00534-203ENST00000523406 C2CD4AQ8NCU7 369 aaPredicted RBP8.02□□□□□ -1.13
LINC00534-203ENST00000523406 ZCRB1Q8TBF4 217 aaKnown RBP8.02□□□□□ -1.13
LINC00534-203ENST00000523406 ATXN3LQ9H3M9 355 aa8.02□□□□□ -1.13
LINC00534-203ENST00000523406 SLC52A2Q9HAB3 445 aa8.02□□□□□ -1.13
LINC00534-203ENST00000523406 STRIP2Q9ULQ0 834 aa8.02□□□□□ -1.13
LINC00534-203ENST00000523406 PPT2Q9UMR5 302 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms