RNA–Protein interactions for RNA: ENST00000523240.5

HDAC2-214, Transcript of histone deacetylase 2, humanhuman

TSL 5

Gene HDAC2, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-214ENST00000523240 ALAS1P13196 640 aa26.38■■□□□ 1.81
HDAC2-214ENST00000523240 CCND3P30281 292 aaPredicted RBP26.38■■□□□ 1.81
HDAC2-214ENST00000523240 SNAP25P60880 206 aa26.38■■□□□ 1.81
HDAC2-214ENST00000523240 AGBL1Q96MI9 1066 aa26.38■■□□□ 1.81
HDAC2-214ENST00000523240 LSG1Q9H089 658 aaKnown RBP26.38■■□□□ 1.81
HDAC2-214ENST00000523240 ACAD9Q9H845 621 aa26.38■■□□□ 1.81
HDAC2-214ENST00000523240 RNF146Q9NTX7 359 aa26.38■■□□□ 1.81
HDAC2-214ENST00000523240 CCPG1Q9ULG6 757 aa26.38■■□□□ 1.81
HDAC2-214ENST00000523240 TKFCQ3LXA3 575 aa26.37■■□□□ 1.81
HDAC2-214ENST00000523240 BTNL9Q6UXG8 535 aa26.37■■□□□ 1.81
HDAC2-214ENST00000523240 CYB5R4Q7L1T6 521 aa26.37■■□□□ 1.81
HDAC2-214ENST00000523240 ANKS1AQ92625 1134 aa26.37■■□□□ 1.81
HDAC2-214ENST00000523240 MYH6P13533 1939 aa26.36■■□□□ 1.81
HDAC2-214ENST00000523240 IFIT3O14879 490 aaKnown RBP26.36■■□□□ 1.81
HDAC2-214ENST00000523240 SNHG28P0DPA3 235 aa26.36■■□□□ 1.81
HDAC2-214ENST00000523240 CRISPLD2Q9H0B8 497 aa26.36■■□□□ 1.81
HDAC2-214ENST00000523240 DIS3Q9Y2L1 958 aaKnown RBP26.36■■□□□ 1.81
HDAC2-214ENST00000523240 FRMPD3Q5JV73 1810 aa26.36■■□□□ 1.81
HDAC2-214ENST00000523240 GOLGA8HP0CJ92 632 aa26.35■■□□□ 1.81
HDAC2-214ENST00000523240 ASPRV1Q53RT3 343 aa26.35■■□□□ 1.81
HDAC2-214ENST00000523240 TRERF1Q96PN7 1200 aa26.35■■□□□ 1.81
HDAC2-214ENST00000523240 RANBP17Q9H2T7 1088 aaKnown RBP26.35■■□□□ 1.81
HDAC2-214ENST00000523240 ZNF536O15090 1300 aa26.35■■□□□ 1.81
HDAC2-214ENST00000523240 MSCO60682 206 aa26.34■■□□□ 1.81
HDAC2-214ENST00000523240 ICAM1P05362 532 aa26.34■■□□□ 1.81
HDAC2-214ENST00000523240 PARP1P09874 1014 aaKnown RBP26.34■■□□□ 1.81
HDAC2-214ENST00000523240 ZNF792Q3KQV3 632 aa26.34■■□□□ 1.81
HDAC2-214ENST00000523240 RNF20Q5VTR2 975 aa26.34■■□□□ 1.81
HDAC2-214ENST00000523240 TAF6LQ9Y6J9 622 aa26.34■■□□□ 1.81
HDAC2-214ENST00000523240 TNRC18O15417 2968 aaPredicted RBP26.34■■□□□ 1.81
HDAC2-214ENST00000523240 DHX16O60231 1041 aaKnown RBP26.33■■□□□ 1.81
HDAC2-214ENST00000523240 WTAPQ15007 396 aa26.33■■□□□ 1.81
HDAC2-214ENST00000523240 STOX1Q6ZVD7 989 aa26.33■■□□□ 1.81
HDAC2-214ENST00000523240 ANKLE1Q8NAG6 615 aa26.33■■□□□ 1.81
HDAC2-214ENST00000523240 HTATIP2Q9BUP3 242 aa26.33■■□□□ 1.81
HDAC2-214ENST00000523240 PNMA2Q9UL42 364 aa26.33■■□□□ 1.81
HDAC2-214ENST00000523240 SMCHD1A6NHR9 2005 aa26.32■■□□□ 1.8
HDAC2-214ENST00000523240 SLC27A2O14975 620 aa26.32■■□□□ 1.8
HDAC2-214ENST00000523240 CYBAP13498 195 aa26.32■■□□□ 1.8
HDAC2-214ENST00000523240 SEC23AQ15436 765 aa26.32■■□□□ 1.8
HDAC2-214ENST00000523240 CREB3L3Q68CJ9 461 aa26.32■■□□□ 1.8
HDAC2-214ENST00000523240 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.32■■□□□ 1.8
HDAC2-214ENST00000523240 TINF2Q9BSI4 451 aa26.32■■□□□ 1.8
HDAC2-214ENST00000523240 DDX20Q9UHI6 824 aaKnown RBP26.32■■□□□ 1.8
HDAC2-214ENST00000523240 MCM3APO60318 1980 aa26.31■■□□□ 1.8
HDAC2-214ENST00000523240 POTEB2H3BUK9 544 aa26.31■■□□□ 1.8
HDAC2-214ENST00000523240 TMEM67Q5HYA8 995 aa26.31■■□□□ 1.8
HDAC2-214ENST00000523240 CHST3Q7LGC8 479 aa26.31■■□□□ 1.8
HDAC2-214ENST00000523240 UBA5Q9GZZ9 404 aa26.31■■□□□ 1.8
HDAC2-214ENST00000523240 OGDHLQ9ULD0 1010 aa26.31■■□□□ 1.8
HDAC2-214ENST00000523240 CNPY2Q9Y2B0 182 aa26.31■■□□□ 1.8
HDAC2-214ENST00000523240 PFASO15067 1338 aa26.31■■□□□ 1.8
HDAC2-214ENST00000523240 NSMFQ6X4W1 530 aa26.3■■□□□ 1.8
HDAC2-214ENST00000523240 NECAB2Q7Z6G3 386 aa26.3■■□□□ 1.8
HDAC2-214ENST00000523240 DNAJC25-GNG10A0A024R161 153 aa26.29■■□□□ 1.8
HDAC2-214ENST00000523240 PRAMEF19Q5SWL8 479 aa26.29■■□□□ 1.8
HDAC2-214ENST00000523240 MB21D2Q8IYB1 491 aaPredicted RBP26.29■■□□□ 1.8
HDAC2-214ENST00000523240 MSL3Q8N5Y2 521 aaKnown RBP26.29■■□□□ 1.8
HDAC2-214ENST00000523240 TRPV1Q8NER1 839 aa26.29■■□□□ 1.8
HDAC2-214ENST00000523240 DPF3Q92784 378 aa26.29■■□□□ 1.8
HDAC2-214ENST00000523240 PAWRQ96IZ0 340 aaKnown RBP26.29■■□□□ 1.8
HDAC2-214ENST00000523240 CPVLQ9H3G5 476 aa26.29■■□□□ 1.8
HDAC2-214ENST00000523240 A1CFQ9NQ94 594 aaKnown RBP26.29■■□□□ 1.8
HDAC2-214ENST00000523240 NRBP1Q9UHY1 535 aa26.29■■□□□ 1.8
HDAC2-214ENST00000523240 SEPT4O43236 478 aa26.28■■□□□ 1.8
HDAC2-214ENST00000523240 IGHA2P01877 340 aa26.28■■□□□ 1.8
HDAC2-214ENST00000523240 MCM5P33992 734 aa26.28■■□□□ 1.8
HDAC2-214ENST00000523240 NECTIN1Q15223 517 aa26.28■■□□□ 1.8
HDAC2-214ENST00000523240 MUM1L1Q5H9M0 696 aa26.28■■□□□ 1.8
HDAC2-214ENST00000523240 TAL1P17542 331 aaPredicted RBP26.27■■□□□ 1.8
HDAC2-214ENST00000523240 LHX8Q68G74 356 aa26.27■■□□□ 1.8
HDAC2-214ENST00000523240 UBE2Q1Q7Z7E8 422 aa26.27■■□□□ 1.8
HDAC2-214ENST00000523240 CATIPQ7Z7H3 387 aa26.27■■□□□ 1.8
HDAC2-214ENST00000523240 ZNF467Q7Z7K2 595 aaPredicted RBP26.27■■□□□ 1.8
HDAC2-214ENST00000523240 DIS3LQ8TF46 1054 aaKnown RBP26.27■■□□□ 1.8
HDAC2-214ENST00000523240 WDR19Q8NEZ3 1342 aa26.27■■□□□ 1.8
HDAC2-214ENST00000523240 SYNGAP1Q96PV0 1343 aa26.27■■□□□ 1.8
HDAC2-214ENST00000523240 PRC1O43663 620 aa26.26■■□□□ 1.79
HDAC2-214ENST00000523240 CDC37Q16543 378 aaPredicted RBP26.26■■□□□ 1.79
HDAC2-214ENST00000523240 USH1GQ495M9 461 aa26.26■■□□□ 1.79
HDAC2-214ENST00000523240 PRPF38BQ5VTL8 546 aaKnown RBP26.26■■□□□ 1.79
HDAC2-214ENST00000523240 ANO1Q5XXA6 986 aa26.26■■□□□ 1.79
HDAC2-214ENST00000523240 ADGRF4Q8IZF3 695 aa26.26■■□□□ 1.79
HDAC2-214ENST00000523240 VAT1LQ9HCJ6 419 aa26.26■■□□□ 1.79
HDAC2-214ENST00000523240 MKI67P46013 3256 aaKnown RBP26.26■■□□□ 1.79
HDAC2-214ENST00000523240 MYCNP04198 464 aaPredicted RBP26.25■■□□□ 1.79
HDAC2-214ENST00000523240 ANTXR2P58335 489 aa26.25■■□□□ 1.79
HDAC2-214ENST00000523240 CNTN2Q02246 1040 aa26.25■■□□□ 1.79
HDAC2-214ENST00000523240 NFXL1Q6ZNB6 911 aa26.25■■□□□ 1.79
HDAC2-214ENST00000523240 C11orf49Q9H6J7 331 aa26.25■■□□□ 1.79
HDAC2-214ENST00000523240 ZHX1Q9UKY1 873 aaPredicted RBP26.25■■□□□ 1.79
HDAC2-214ENST00000523240 PTPDC1A2A3K4 754 aa26.24■■□□□ 1.79
HDAC2-214ENST00000523240 KLRF2D3W0D1 207 aa26.24■■□□□ 1.79
HDAC2-214ENST00000523240 MAMDC4Q6UXC1 1216 aa26.24■■□□□ 1.79
HDAC2-214ENST00000523240 FAM133AQ8N9E0 248 aa26.24■■□□□ 1.79
HDAC2-214ENST00000523240 TMEM87BQ96K49 555 aa26.24■■□□□ 1.79
HDAC2-214ENST00000523240 MTA3Q9BTC8 594 aa26.24■■□□□ 1.79
HDAC2-214ENST00000523240 CYP39A1Q9NYL5 469 aa26.24■■□□□ 1.79
HDAC2-214ENST00000523240 ASB14A6NK59 587 aa26.23■■□□□ 1.79
HDAC2-214ENST00000523240 NFIBO00712 420 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms