RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 ALG1Q9BT22 464 aa7.96□□□□□ -1.14
CSMD1-211ENST00000523062 TMEM63CQ9P1W3 806 aa7.96□□□□□ -1.14
CSMD1-211ENST00000523062 MKRN1Q9UHC7 482 aaKnown RBP7.96□□□□□ -1.14
CSMD1-211ENST00000523062 CDV3Q9UKY7 258 aaKnown RBP7.96□□□□□ -1.14
CSMD1-211ENST00000523062 CFAP45Q9UL16 551 aa7.96□□□□□ -1.14
CSMD1-211ENST00000523062 PRDM1O75626 825 aa7.95□□□□□ -1.14
CSMD1-211ENST00000523062 USP17L8P0C7I0 530 aa7.95□□□□□ -1.14
CSMD1-211ENST00000523062 CALM1P0DP23 149 aa7.95□□□□□ -1.14
CSMD1-211ENST00000523062 CALM2P0DP24 149 aa7.95□□□□□ -1.14
CSMD1-211ENST00000523062 CALM3P0DP25 149 aa7.95□□□□□ -1.14
CSMD1-211ENST00000523062 RXRAP19793 462 aa7.95□□□□□ -1.14
CSMD1-211ENST00000523062 CDC27P30260 824 aa7.95□□□□□ -1.14
CSMD1-211ENST00000523062 ADD1P35611 737 aaKnown RBP7.95□□□□□ -1.14
CSMD1-211ENST00000523062 GUCY1B3Q02153 619 aa7.95□□□□□ -1.14
CSMD1-211ENST00000523062 SSRP1Q08945 709 aaKnown RBP7.95□□□□□ -1.14
CSMD1-211ENST00000523062 TRIM29Q14134 588 aa7.95□□□□□ -1.14
CSMD1-211ENST00000523062 NTRK3Q16288 839 aa7.95□□□□□ -1.14
CSMD1-211ENST00000523062 IFIT1BQ5T764 474 aaKnown RBP7.95□□□□□ -1.14
CSMD1-211ENST00000523062 C12orf60Q5U649 245 aa7.95□□□□□ -1.14
CSMD1-211ENST00000523062 FAM173BQ6P4H8 233 aa7.95□□□□□ -1.14
CSMD1-211ENST00000523062 OLFM4Q6UX06 510 aa7.95□□□□□ -1.14
CSMD1-211ENST00000523062 CATIPQ7Z7H3 387 aa7.95□□□□□ -1.14
CSMD1-211ENST00000523062 TTC6Q86TZ1 520 aa7.95□□□□□ -1.14
CSMD1-211ENST00000523062 TRIM22Q8IYM9 498 aa7.95□□□□□ -1.14
CSMD1-211ENST00000523062 ENAHQ8N8S7 591 aaPredicted RBP7.95□□□□□ -1.14
CSMD1-211ENST00000523062 SUPT20HQ8NEM7 779 aa7.95□□□□□ -1.14
CSMD1-211ENST00000523062 FBXO18Q8NFZ0 1043 aa7.95□□□□□ -1.14
CSMD1-211ENST00000523062 TGFBRAP1Q8WUH2 860 aa7.95□□□□□ -1.14
CSMD1-211ENST00000523062 LEO1Q8WVC0 666 aaPredicted RBP7.95□□□□□ -1.14
CSMD1-211ENST00000523062 GPKOWQ92917 476 aaPredicted RBP eCLIP7.95□□□□□ -1.14
CSMD1-211ENST00000523062 KCTD15Q96SI1 283 aaPredicted RBP7.95□□□□□ -1.14
CSMD1-211ENST00000523062 KRTAP4-12Q9BQ66 201 aa7.95□□□□□ -1.14
CSMD1-211ENST00000523062 MYL10Q9BUA6 226 aa7.95□□□□□ -1.14
CSMD1-211ENST00000523062 SLC26A6Q9BXS9 759 aa7.95□□□□□ -1.14
CSMD1-211ENST00000523062 ZNF395Q9H8N7 513 aaPredicted RBP7.95□□□□□ -1.14
CSMD1-211ENST00000523062 GRPEL1Q9HAV7 217 aa7.95□□□□□ -1.14
CSMD1-211ENST00000523062 ZNF287Q9HBT7 754 aa7.95□□□□□ -1.14
CSMD1-211ENST00000523062 MYH2Q9UKX2 1941 aa7.95□□□□□ -1.14
CSMD1-211ENST00000523062 TCHHQ07283 1943 aa7.94□□□□□ -1.14
CSMD1-211ENST00000523062 GOLGA6L4A6NEF3 574 aa7.94□□□□□ -1.14
CSMD1-211ENST00000523062 TSPY2A6NKD2 308 aa7.94□□□□□ -1.14
CSMD1-211ENST00000523062 SMIM22K7EJ46 135 aa7.94□□□□□ -1.14
CSMD1-211ENST00000523062 TULP1O00294 542 aaPredicted RBP7.94□□□□□ -1.14
CSMD1-211ENST00000523062 LETM1O95202 739 aaPredicted RBP7.94□□□□□ -1.14
CSMD1-211ENST00000523062 POLR3DP05423 398 aaPredicted RBP7.94□□□□□ -1.14
CSMD1-211ENST00000523062 CHRNA5P30532 468 aa7.94□□□□□ -1.14
CSMD1-211ENST00000523062 RHBDL3P58872 404 aa7.94□□□□□ -1.14
CSMD1-211ENST00000523062 FKBP1AP62942 108 aaKnown RBP7.94□□□□□ -1.14
CSMD1-211ENST00000523062 LRSAM1Q6UWE0 723 aa7.94□□□□□ -1.14
CSMD1-211ENST00000523062 LYSMD3Q7Z3D4 306 aa7.94□□□□□ -1.14
CSMD1-211ENST00000523062 DEFB132Q7Z7B7 95 aa7.94□□□□□ -1.14
CSMD1-211ENST00000523062 GAS2L3Q86XJ1 694 aa7.94□□□□□ -1.14
CSMD1-211ENST00000523062 MAPKAPK5Q8IW41 473 aa7.94□□□□□ -1.14
CSMD1-211ENST00000523062 CCDC144CPQ8IYA2 1237 aa7.94□□□□□ -1.14
CSMD1-211ENST00000523062 FANCBQ8NB91 859 aa7.94□□□□□ -1.14
CSMD1-211ENST00000523062 NUP133Q8WUM0 1156 aa7.94□□□□□ -1.14
CSMD1-211ENST00000523062 ZNF837Q96EG3 531 aaPredicted RBP7.94□□□□□ -1.14
CSMD1-211ENST00000523062 RBM28Q9NW13 759 aaKnown RBP7.94□□□□□ -1.14
CSMD1-211ENST00000523062 MKL2Q9ULH7 1088 aa7.94□□□□□ -1.14
CSMD1-211ENST00000523062 DAGLAQ9Y4D2 1042 aa7.94□□□□□ -1.14
CSMD1-211ENST00000523062 FLT1P17948 1338 aa7.94□□□□□ -1.14
CSMD1-211ENST00000523062 DDX60LQ5H9U9 1706 aaKnown RBP7.94□□□□□ -1.14
CSMD1-211ENST00000523062 DLEC1Q9Y238 1755 aa7.94□□□□□ -1.14
CSMD1-211ENST00000523062 SYCE3A1L190 88 aa7.93□□□□□ -1.14
CSMD1-211ENST00000523062 OIP5O43482 229 aa7.93□□□□□ -1.14
CSMD1-211ENST00000523062 ECE2O60344 883 aa7.93□□□□□ -1.14
CSMD1-211ENST00000523062 DEXIO95424 95 aa7.93□□□□□ -1.14
CSMD1-211ENST00000523062 AKAP17AQ02040 695 aaKnown RBP7.93□□□□□ -1.14
CSMD1-211ENST00000523062 KIF23Q02241 960 aaPredicted RBP7.93□□□□□ -1.14
CSMD1-211ENST00000523062 GNL2Q13823 731 aaKnown RBP7.93□□□□□ -1.14
CSMD1-211ENST00000523062 KRT40Q6A162 431 aa7.93□□□□□ -1.14
CSMD1-211ENST00000523062 OTUD7BQ6GQQ9 843 aa7.93□□□□□ -1.14
CSMD1-211ENST00000523062 HHIPL2Q6UWX4 724 aa7.93□□□□□ -1.14
CSMD1-211ENST00000523062 C16orf86Q6ZW13 317 aa7.93□□□□□ -1.14
CSMD1-211ENST00000523062 CERS5Q8N5B7 392 aa7.93□□□□□ -1.14
CSMD1-211ENST00000523062 PHKBQ93100 1093 aa7.93□□□□□ -1.14
CSMD1-211ENST00000523062 RNF26Q9BY78 433 aaPredicted RBP7.93□□□□□ -1.14
CSMD1-211ENST00000523062 MKNK2Q9HBH9 465 aa7.93□□□□□ -1.14
CSMD1-211ENST00000523062 TCP11L1Q9NUJ3 509 aa7.93□□□□□ -1.14
CSMD1-211ENST00000523062 TFIP11Q9UBB9 837 aaKnown RBP7.93□□□□□ -1.14
CSMD1-211ENST00000523062 SAP30BPQ9UHR5 308 aaKnown RBP7.93□□□□□ -1.14
CSMD1-211ENST00000523062 TTF2Q9UNY4 1162 aaKnown RBP7.93□□□□□ -1.14
CSMD1-211ENST00000523062 SLX4Q8IY92 1834 aa7.93□□□□□ -1.14
CSMD1-211ENST00000523062 SNED1Q8TER0 1413 aa7.93□□□□□ -1.14
CSMD1-211ENST00000523062 MYH15Q9Y2K3 1946 aa7.92□□□□□ -1.14
CSMD1-211ENST00000523062 YEATS4O95619 227 aa7.92□□□□□ -1.14
CSMD1-211ENST00000523062 TSPY3P0CV98 308 aa7.92□□□□□ -1.14
CSMD1-211ENST00000523062 TSPY8P0CW00 308 aa7.92□□□□□ -1.14
CSMD1-211ENST00000523062 XRCC6P12956 609 aaKnown RBP eCLIP7.92□□□□□ -1.14
CSMD1-211ENST00000523062 KIF5BP33176 963 aa7.92□□□□□ -1.14
CSMD1-211ENST00000523062 TFAP4Q01664 338 aa7.92□□□□□ -1.14
CSMD1-211ENST00000523062 KIAA2012Q0VF49 1180 aa7.92□□□□□ -1.14
CSMD1-211ENST00000523062 SAFBQ15424 915 aaKnown RBP eCLIP7.92□□□□□ -1.14
CSMD1-211ENST00000523062 SLC4A8Q2Y0W8 1093 aa7.92□□□□□ -1.14
CSMD1-211ENST00000523062 CCDC93Q567U6 631 aa7.92□□□□□ -1.14
CSMD1-211ENST00000523062 FAM47AQ5JRC9 791 aa7.92□□□□□ -1.14
CSMD1-211ENST00000523062 STRIP1Q5VSL9 837 aa7.92□□□□□ -1.14
CSMD1-211ENST00000523062 MYSM1Q5VVJ2 828 aa7.92□□□□□ -1.14
CSMD1-211ENST00000523062 TMTC3Q6ZXV5 915 aa7.92□□□□□ -1.14
CSMD1-211ENST00000523062 NBPF11Q86T75 865 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms