RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 DNAJB12Q9NXW2 375 aaKnown RBP8.24□□□□□ -1.09
VPS13B-211ENST00000522802 CHPF2Q9P2E5 772 aa8.24□□□□□ -1.09
VPS13B-211ENST00000522802 XDHP47989 1333 aa8.24□□□□□ -1.09
VPS13B-211ENST00000522802 ARAP2Q8WZ64 1704 aa8.23□□□□□ -1.09
VPS13B-211ENST00000522802 TNFRSF21O75509 655 aa8.23□□□□□ -1.09
VPS13B-211ENST00000522802 MAPK1P28482 360 aa8.23□□□□□ -1.09
VPS13B-211ENST00000522802 SOX18P35713 384 aa8.23□□□□□ -1.09
VPS13B-211ENST00000522802 INHBEP58166 350 aa8.23□□□□□ -1.09
VPS13B-211ENST00000522802 MAP3K11Q16584 847 aa8.23□□□□□ -1.09
VPS13B-211ENST00000522802 TMC7Q7Z402 723 aa8.23□□□□□ -1.09
VPS13B-211ENST00000522802 PLBD2Q8NHP8 589 aa8.23□□□□□ -1.09
VPS13B-211ENST00000522802 ARHGAP39Q9C0H5 1083 aa8.23□□□□□ -1.09
VPS13B-211ENST00000522802 IGFLR1Q9H665 355 aa8.23□□□□□ -1.09
VPS13B-211ENST00000522802 CNTN3Q9P232 1028 aa8.23□□□□□ -1.09
VPS13B-211ENST00000522802 PCDHAC2Q9Y5I4 1007 aa8.23□□□□□ -1.09
VPS13B-211ENST00000522802 AOX1Q06278 1338 aa8.23□□□□□ -1.09
VPS13B-211ENST00000522802 SHISA8B8ZZ34 492 aa8.22□□□□□ -1.09
VPS13B-211ENST00000522802 IGHA1P01876 353 aa8.22□□□□□ -1.09
VPS13B-211ENST00000522802 PSAPP07602 524 aa8.22□□□□□ -1.09
VPS13B-211ENST00000522802 KLRK1P26718 216 aa8.22□□□□□ -1.09
VPS13B-211ENST00000522802 ADH7P40394 386 aa8.22□□□□□ -1.09
VPS13B-211ENST00000522802 NRLP54845 237 aa8.22□□□□□ -1.09
VPS13B-211ENST00000522802 PLAURQ03405 335 aa8.22□□□□□ -1.09
VPS13B-211ENST00000522802 PCSK7Q16549 785 aa8.22□□□□□ -1.09
VPS13B-211ENST00000522802 PODNQ7Z5L7 613 aa8.22□□□□□ -1.09
VPS13B-211ENST00000522802 KIAA0825Q8IV33 1275 aa8.22□□□□□ -1.09
VPS13B-211ENST00000522802 C1orf127Q8N9H9 656 aa8.22□□□□□ -1.09
VPS13B-211ENST00000522802 DPF3Q92784 378 aa8.22□□□□□ -1.09
VPS13B-211ENST00000522802 ALKBH8Q96BT7 664 aaKnown RBP8.22□□□□□ -1.09
VPS13B-211ENST00000522802 ZBED3Q96IU2 234 aaPredicted RBP8.22□□□□□ -1.09
VPS13B-211ENST00000522802 BTBD6Q96KE9 485 aa8.22□□□□□ -1.09
VPS13B-211ENST00000522802 DMRTB1Q96MA1 342 aa8.22□□□□□ -1.09
VPS13B-211ENST00000522802 UBE2OQ9C0C9 1292 aaKnown RBP8.22□□□□□ -1.09
VPS13B-211ENST00000522802 DEFB129Q9H1M3 183 aa8.22□□□□□ -1.09
VPS13B-211ENST00000522802 MYO3BQ8WXR4 1341 aa8.22□□□□□ -1.09
VPS13B-211ENST00000522802 GPR182O15218 404 aa8.21□□□□□ -1.1
VPS13B-211ENST00000522802 ALAS2P22557 587 aa8.21□□□□□ -1.1
VPS13B-211ENST00000522802 GPLD1P80108 840 aa8.21□□□□□ -1.1
VPS13B-211ENST00000522802 KANK3Q6NY19 840 aa8.21□□□□□ -1.1
VPS13B-211ENST00000522802 UBE2Q1Q7Z7E8 422 aa8.21□□□□□ -1.1
VPS13B-211ENST00000522802 NBPF11Q86T75 865 aa8.21□□□□□ -1.1
VPS13B-211ENST00000522802 TXNRD3Q86VQ6 643 aa8.21□□□□□ -1.1
VPS13B-211ENST00000522802 BRI3BPQ8WY22 251 aa8.21□□□□□ -1.1
VPS13B-211ENST00000522802 ASB16Q96NS5 453 aa8.21□□□□□ -1.1
VPS13B-211ENST00000522802 CHRDQ9H2X0 955 aa8.21□□□□□ -1.1
VPS13B-211ENST00000522802 SLC6A14Q9UN76 642 aa8.21□□□□□ -1.1
VPS13B-211ENST00000522802 CLSPNQ9HAW4 1339 aa8.21□□□□□ -1.1
VPS13B-211ENST00000522802 CLRN2A0PK11 232 aa8.2□□□□□ -1.1
VPS13B-211ENST00000522802 CYP2E1P05181 493 aaPredicted RBP8.2□□□□□ -1.1
VPS13B-211ENST00000522802 MAP3K10Q02779 954 aa8.2□□□□□ -1.1
VPS13B-211ENST00000522802 DSC3Q14574 896 aa8.2□□□□□ -1.1
VPS13B-211ENST00000522802 TAF1CQ15572 869 aaPredicted RBP8.2□□□□□ -1.1
VPS13B-211ENST00000522802 STRIP1Q5VSL9 837 aa8.2□□□□□ -1.1
VPS13B-211ENST00000522802 OTUD7BQ6GQQ9 843 aa8.2□□□□□ -1.1
VPS13B-211ENST00000522802 ZSCAN29Q8IWY8 852 aaPredicted RBP8.2□□□□□ -1.1
VPS13B-211ENST00000522802 FAM43AQ8N2R8 423 aa8.2□□□□□ -1.1
VPS13B-211ENST00000522802 SNX29Q8TEQ0 813 aa8.2□□□□□ -1.1
VPS13B-211ENST00000522802 JARID2Q92833 1246 aaPredicted RBP8.2□□□□□ -1.1
VPS13B-211ENST00000522802 PMEPA1Q969W9 287 aa8.2□□□□□ -1.1
VPS13B-211ENST00000522802 OPTNQ96CV9 577 aa8.2□□□□□ -1.1
VPS13B-211ENST00000522802 ENAMQ9NRM1 1142 aa8.2□□□□□ -1.1
VPS13B-211ENST00000522802 FOXD3Q9UJU5 478 aaPredicted RBP8.2□□□□□ -1.1
VPS13B-211ENST00000522802 STARD13Q9Y3M8 1113 aa8.2□□□□□ -1.1
VPS13B-211ENST00000522802 ZNF804BA4D1E1 1349 aa8.2□□□□□ -1.1
VPS13B-211ENST00000522802 MUC3AQ02505 3323 aa8.19□□□□□ -1.1
VPS13B-211ENST00000522802 TREHO43280 583 aa8.19□□□□□ -1.1
VPS13B-211ENST00000522802 TBC1D8BQ0IIM8 1120 aa8.19□□□□□ -1.1
VPS13B-211ENST00000522802 CCDC27Q2M243 656 aa8.19□□□□□ -1.1
VPS13B-211ENST00000522802 CCDC152Q4G0S7 254 aa8.19□□□□□ -1.1
VPS13B-211ENST00000522802 NBPF12Q5TAG4 269 aaPredicted RBP8.19□□□□□ -1.1
VPS13B-211ENST00000522802 Q7L0L9 218 aa8.19□□□□□ -1.1
VPS13B-211ENST00000522802 ANKRD18AQ8IVF6 992 aa8.19□□□□□ -1.1
VPS13B-211ENST00000522802 CERS5Q8N5B7 392 aa8.19□□□□□ -1.1
VPS13B-211ENST00000522802 ZBTB38Q8NAP3 1195 aaPredicted RBP8.19□□□□□ -1.1
VPS13B-211ENST00000522802 SCARF2Q96GP6 870 aaPredicted RBP8.19□□□□□ -1.1
VPS13B-211ENST00000522802 NIF3L1Q9GZT8 377 aa8.19□□□□□ -1.1
VPS13B-211ENST00000522802 ZFYVE28Q9HCC9 887 aa8.19□□□□□ -1.1
VPS13B-211ENST00000522802 MAPK8IP3Q9UPT6 1336 aa8.19□□□□□ -1.1
VPS13B-211ENST00000522802 CCL15-CCL14A0A0B4J2E2 113 aa8.18□□□□□ -1.1
VPS13B-211ENST00000522802 PHACTR2O75167 634 aa8.18□□□□□ -1.1
VPS13B-211ENST00000522802 USP2O75604 605 aaPredicted RBP8.18□□□□□ -1.1
VPS13B-211ENST00000522802 KIF4AO95239 1232 aa8.18□□□□□ -1.1
VPS13B-211ENST00000522802 NEFLP07196 543 aa8.18□□□□□ -1.1
VPS13B-211ENST00000522802 NEFMP07197 916 aa8.18□□□□□ -1.1
VPS13B-211ENST00000522802 HOXB4P17483 251 aaPredicted RBP8.18□□□□□ -1.1
VPS13B-211ENST00000522802 CES1P23141 567 aa8.18□□□□□ -1.1
VPS13B-211ENST00000522802 CTGFP29279 349 aa8.18□□□□□ -1.1
VPS13B-211ENST00000522802 LACTBP83111 547 aaPredicted RBP8.18□□□□□ -1.1
VPS13B-211ENST00000522802 CCL15Q16663 113 aa8.18□□□□□ -1.1
VPS13B-211ENST00000522802 DNAJC14Q6Y2X3 702 aaPredicted RBP8.18□□□□□ -1.1
VPS13B-211ENST00000522802 CHSY3Q70JA7 882 aa8.18□□□□□ -1.1
VPS13B-211ENST00000522802 ANKRD13AQ8IZ07 590 aa8.18□□□□□ -1.1
VPS13B-211ENST00000522802 COA1Q9GZY4 146 aa8.18□□□□□ -1.1
VPS13B-211ENST00000522802 SALL4Q9UJQ4 1053 aa8.18□□□□□ -1.1
VPS13B-211ENST00000522802 MINPP1Q9UNW1 487 aa8.18□□□□□ -1.1
VPS13B-211ENST00000522802 PPP2R3BQ9Y5P8 575 aa8.18□□□□□ -1.1
VPS13B-211ENST00000522802 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.18□□□□□ -1.1
VPS13B-211ENST00000522802 MGAMO43451 1857 aa8.17□□□□□ -1.1
VPS13B-211ENST00000522802 CDH23Q9H251 3354 aa8.17□□□□□ -1.1
VPS13B-211ENST00000522802 A0A1W2PPC1 479 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms