RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 ELP1O95163 1332 aa18.23■□□□□ 0.51
TRAPPC9-213ENST00000522504 TMEM265A0A087WTH1 108 aa18.23■□□□□ 0.51
TRAPPC9-213ENST00000522504 GRXCR1A8MXD5 290 aa18.23■□□□□ 0.51
TRAPPC9-213ENST00000522504 PTGS1P23219 599 aa18.23■□□□□ 0.51
TRAPPC9-213ENST00000522504 TDO2P48775 406 aa18.23■□□□□ 0.51
TRAPPC9-213ENST00000522504 GJA9P57773 515 aa18.23■□□□□ 0.51
TRAPPC9-213ENST00000522504 MFSD5Q6N075 450 aa18.23■□□□□ 0.51
TRAPPC9-213ENST00000522504 CCDC144CPQ8IYA2 1237 aa18.23■□□□□ 0.51
TRAPPC9-213ENST00000522504 CHMP4CQ96CF2 233 aa18.23■□□□□ 0.51
TRAPPC9-213ENST00000522504 SEC62Q99442 399 aaKnown RBP18.23■□□□□ 0.51
TRAPPC9-213ENST00000522504 CHMP4BQ9H444 224 aaKnown RBP18.23■□□□□ 0.51
TRAPPC9-213ENST00000522504 HOMER2Q9NSB8 354 aa18.23■□□□□ 0.51
TRAPPC9-213ENST00000522504 FEM1BQ9UK73 627 aa18.23■□□□□ 0.51
TRAPPC9-213ENST00000522504 DDX49Q9Y6V7 483 aaKnown RBP18.23■□□□□ 0.51
TRAPPC9-213ENST00000522504 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC9-213ENST00000522504 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC9-213ENST00000522504 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC9-213ENST00000522504 TTLL1O95922 423 aa18.22■□□□□ 0.51
TRAPPC9-213ENST00000522504 APPP05067 770 aa18.22■□□□□ 0.51
TRAPPC9-213ENST00000522504 PBX2P40425 430 aa18.22■□□□□ 0.51
TRAPPC9-213ENST00000522504 GNASQ5JWF2 1037 aa18.22■□□□□ 0.51
TRAPPC9-213ENST00000522504 TMEM240Q5SV17 173 aa18.22■□□□□ 0.51
TRAPPC9-213ENST00000522504 ZNF444Q8N0Y2 327 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC9-213ENST00000522504 GMCL1P1Q8NEA9 526 aa18.22■□□□□ 0.51
TRAPPC9-213ENST00000522504 CHST13Q8NET6 341 aa18.22■□□□□ 0.51
TRAPPC9-213ENST00000522504 GLT1D1Q96MS3 346 aa18.22■□□□□ 0.51
TRAPPC9-213ENST00000522504 ABHD16BQ9H3Z7 469 aa18.22■□□□□ 0.51
TRAPPC9-213ENST00000522504 DCTPP1Q9H773 170 aa18.22■□□□□ 0.51
TRAPPC9-213ENST00000522504 ASTN1O14525 1302 aa18.22■□□□□ 0.51
TRAPPC9-213ENST00000522504 ZNF536O15090 1300 aa18.22■□□□□ 0.51
TRAPPC9-213ENST00000522504 PATL2C9JE40 543 aaKnown RBP18.21■□□□□ 0.51
TRAPPC9-213ENST00000522504 ARVCFO00192 962 aa18.21■□□□□ 0.51
TRAPPC9-213ENST00000522504 ACRP10323 421 aa18.21■□□□□ 0.51
TRAPPC9-213ENST00000522504 CSF2RAP15509 400 aa18.21■□□□□ 0.51
TRAPPC9-213ENST00000522504 BEX3Q00994 111 aa18.21■□□□□ 0.51
TRAPPC9-213ENST00000522504 RASIP1Q5U651 963 aa18.21■□□□□ 0.51
TRAPPC9-213ENST00000522504 SLFN13Q68D06 897 aa18.21■□□□□ 0.51
TRAPPC9-213ENST00000522504 FAM126BQ8IXS8 530 aa18.21■□□□□ 0.51
TRAPPC9-213ENST00000522504 IFNL3Q8IZI9 196 aa18.21■□□□□ 0.51
TRAPPC9-213ENST00000522504 FAM133AQ8N9E0 248 aa18.21■□□□□ 0.51
TRAPPC9-213ENST00000522504 NEDD1Q8NHV4 660 aa18.21■□□□□ 0.51
TRAPPC9-213ENST00000522504 VTI1AQ96AJ9 217 aa18.21■□□□□ 0.51
TRAPPC9-213ENST00000522504 TIFAQ96CG3 184 aa18.21■□□□□ 0.51
TRAPPC9-213ENST00000522504 AGBL1Q96MI9 1066 aa18.21■□□□□ 0.51
TRAPPC9-213ENST00000522504 ZNF576Q9H609 170 aa18.21■□□□□ 0.51
TRAPPC9-213ENST00000522504 CTDP1Q9Y5B0 961 aaPredicted RBP18.21■□□□□ 0.51
TRAPPC9-213ENST00000522504 PLIN4Q96Q06 1357 aa18.2■□□□□ 0.5
TRAPPC9-213ENST00000522504 SOWAHBA6NEL2 793 aa18.2■□□□□ 0.5
TRAPPC9-213ENST00000522504 TMEM232C9JQI7 657 aa18.2■□□□□ 0.5
TRAPPC9-213ENST00000522504 BMP3P12645 472 aa18.2■□□□□ 0.5
TRAPPC9-213ENST00000522504 GNAT2P19087 354 aa18.2■□□□□ 0.5
TRAPPC9-213ENST00000522504 OAZ1P54368 228 aa18.2■□□□□ 0.5
TRAPPC9-213ENST00000522504 PCSK9Q8NBP7 692 aaKnown RBP18.2■□□□□ 0.5
TRAPPC9-213ENST00000522504 PBX4Q9BYU1 374 aa18.2■□□□□ 0.5
TRAPPC9-213ENST00000522504 PPP1R12CQ9BZL4 782 aa18.2■□□□□ 0.5
TRAPPC9-213ENST00000522504 A1CFQ9NQ94 594 aaKnown RBP18.2■□□□□ 0.5
TRAPPC9-213ENST00000522504 PRDM6Q9NQX0 595 aa18.2■□□□□ 0.5
TRAPPC9-213ENST00000522504 FBXO40Q9UH90 709 aa18.2■□□□□ 0.5
TRAPPC9-213ENST00000522504 SYNPO2Q9UMS6 1093 aa18.2■□□□□ 0.5
TRAPPC9-213ENST00000522504 MCM3APO60318 1980 aa18.2■□□□□ 0.5
TRAPPC9-213ENST00000522504 A0A0U1RQG5 324 aaPredicted RBP18.19■□□□□ 0.5
TRAPPC9-213ENST00000522504 FOXP2O15409 715 aa18.19■□□□□ 0.5
TRAPPC9-213ENST00000522504 ZFYP08048 801 aaPredicted RBP18.19■□□□□ 0.5
TRAPPC9-213ENST00000522504 SNAP25P60880 206 aa18.19■□□□□ 0.5
TRAPPC9-213ENST00000522504 NKX3-2P78367 333 aa18.19■□□□□ 0.5
TRAPPC9-213ENST00000522504 TFAP4Q01664 338 aa18.19■□□□□ 0.5
TRAPPC9-213ENST00000522504 TMEM63BQ5T3F8 832 aa18.19■□□□□ 0.5
TRAPPC9-213ENST00000522504 RASGRP2Q7LDG7 609 aa18.19■□□□□ 0.5
TRAPPC9-213ENST00000522504 OTUD7AQ8TE49 926 aaPredicted RBP18.19■□□□□ 0.5
TRAPPC9-213ENST00000522504 INCENPQ9NQS7 918 aa18.19■□□□□ 0.5
TRAPPC9-213ENST00000522504 MROH7Q68CQ1 1323 aa18.19■□□□□ 0.5
TRAPPC9-213ENST00000522504 MYH4Q9Y623 1939 aa18.18■□□□□ 0.5
TRAPPC9-213ENST00000522504 CD4P01730 458 aa18.18■□□□□ 0.5
TRAPPC9-213ENST00000522504 TSPY3P0CV98 308 aa18.18■□□□□ 0.5
TRAPPC9-213ENST00000522504 TSPY8P0CW00 308 aa18.18■□□□□ 0.5
TRAPPC9-213ENST00000522504 CYP2C18P33260 490 aa18.18■□□□□ 0.5
TRAPPC9-213ENST00000522504 PPIGQ13427 754 aaKnown RBP eCLIP18.18■□□□□ 0.5
TRAPPC9-213ENST00000522504 CXCL17Q6UXB2 119 aa18.18■□□□□ 0.5
TRAPPC9-213ENST00000522504 ZNF365Q70YC5 407 aa18.18■□□□□ 0.5
TRAPPC9-213ENST00000522504 GPATCH3Q96I76 525 aa18.18■□□□□ 0.5
TRAPPC9-213ENST00000522504 ACAD9Q9H845 621 aa18.18■□□□□ 0.5
TRAPPC9-213ENST00000522504 SPC25Q9HBM1 224 aa18.18■□□□□ 0.5
TRAPPC9-213ENST00000522504 ZNF287Q9HBT7 754 aa18.18■□□□□ 0.5
TRAPPC9-213ENST00000522504 GNEQ9Y223 722 aaKnown RBP18.18■□□□□ 0.5
TRAPPC9-213ENST00000522504 GRIN2DO15399 1336 aa18.18■□□□□ 0.5
TRAPPC9-213ENST00000522504 MCCP23508 829 aa18.17■□□□□ 0.5
TRAPPC9-213ENST00000522504 TNFAIP2Q03169 654 aa18.17■□□□□ 0.5
TRAPPC9-213ENST00000522504 SLC43A3Q8NBI5 491 aa18.17■□□□□ 0.5
TRAPPC9-213ENST00000522504 PI4K2BQ8TCG2 481 aa18.17■□□□□ 0.5
TRAPPC9-213ENST00000522504 GMCL1Q96IK5 515 aa18.17■□□□□ 0.5
TRAPPC9-213ENST00000522504 PDGFCQ9NRA1 345 aa18.17■□□□□ 0.5
TRAPPC9-213ENST00000522504 RNF146Q9NTX7 359 aa18.17■□□□□ 0.5
TRAPPC9-213ENST00000522504 CXXC1Q9P0U4 656 aaPredicted RBP18.17■□□□□ 0.5
TRAPPC9-213ENST00000522504 UMODL1Q5DID0 1318 aa18.17■□□□□ 0.5
TRAPPC9-213ENST00000522504 NMT2O60551 498 aa18.16■□□□□ 0.5
TRAPPC9-213ENST00000522504 SMPD1P17405 629 aa18.16■□□□□ 0.5
TRAPPC9-213ENST00000522504 STAT2P52630 851 aa18.16■□□□□ 0.5
TRAPPC9-213ENST00000522504 PPARAQ07869 468 aa18.16■□□□□ 0.5
TRAPPC9-213ENST00000522504 MUM1L1Q5H9M0 696 aa18.16■□□□□ 0.5
TRAPPC9-213ENST00000522504 KCTD1Q719H9 257 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms