RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 USP17L24Q0WX57 530 aa24.59■■□□□ 1.53
R3HCC1-208ENST00000522012 CCDC174Q6PII3 467 aa24.59■■□□□ 1.53
R3HCC1-208ENST00000522012 FBXO11Q86XK2 927 aa24.59■■□□□ 1.53
R3HCC1-208ENST00000522012 WNK4Q96J92 1243 aa24.59■■□□□ 1.53
R3HCC1-208ENST00000522012 CHAMP1Q96JM3 812 aa24.59■■□□□ 1.53
R3HCC1-208ENST00000522012 RANBP17Q9H2T7 1088 aaKnown RBP24.59■■□□□ 1.53
R3HCC1-208ENST00000522012 SNAPC2Q13487 334 aa24.58■■□□□ 1.53
R3HCC1-208ENST00000522012 TREML2Q5T2D2 321 aa24.58■■□□□ 1.53
R3HCC1-208ENST00000522012 FAM173BQ6P4H8 233 aa24.58■■□□□ 1.53
R3HCC1-208ENST00000522012 CATSPERGQ6ZRH7 1159 aa24.58■■□□□ 1.53
R3HCC1-208ENST00000522012 FAM177A1Q8N128 213 aaPredicted RBP24.58■■□□□ 1.53
R3HCC1-208ENST00000522012 PROCA1Q8NCQ7 364 aaPredicted RBP24.58■■□□□ 1.53
R3HCC1-208ENST00000522012 OXER1Q8TDS5 423 aa24.58■■□□□ 1.53
R3HCC1-208ENST00000522012 GBP4Q96PP9 640 aa24.58■■□□□ 1.53
R3HCC1-208ENST00000522012 AMNQ9BXJ7 453 aa24.58■■□□□ 1.53
R3HCC1-208ENST00000522012 PPP1R9AQ9ULJ8 1098 aa24.58■■□□□ 1.53
R3HCC1-208ENST00000522012 PCDHA1Q9Y5I3 950 aa24.58■■□□□ 1.53
R3HCC1-208ENST00000522012 SMCO2A6NFE2 343 aa24.57■■□□□ 1.52
R3HCC1-208ENST00000522012 MKRN3Q13064 507 aaKnown RBP24.57■■□□□ 1.52
R3HCC1-208ENST00000522012 FOXP1Q9H334 677 aaPredicted RBP24.57■■□□□ 1.52
R3HCC1-208ENST00000522012 CTDP1Q9Y5B0 961 aaPredicted RBP24.57■■□□□ 1.52
R3HCC1-208ENST00000522012 PHIPQ8WWQ0 1821 aa24.57■■□□□ 1.52
R3HCC1-208ENST00000522012 BAG4O95429 457 aaKnown RBP24.56■■□□□ 1.52
R3HCC1-208ENST00000522012 COG2Q14746 738 aa24.56■■□□□ 1.52
R3HCC1-208ENST00000522012 USH1GQ495M9 461 aa24.56■■□□□ 1.52
R3HCC1-208ENST00000522012 FASTKD5Q7L8L6 764 aaKnown RBP24.56■■□□□ 1.52
R3HCC1-208ENST00000522012 BRAPQ7Z569 592 aa24.56■■□□□ 1.52
R3HCC1-208ENST00000522012 C6orf50Q9HD87 102 aa24.56■■□□□ 1.52
R3HCC1-208ENST00000522012 PCDHA4Q9UN74 947 aa24.56■■□□□ 1.52
R3HCC1-208ENST00000522012 U2AF2P26368 475 aaKnown RBP eCLIP24.56■■□□□ 1.52
R3HCC1-208ENST00000522012 NR5A1Q13285 461 aa24.56■■□□□ 1.52
R3HCC1-208ENST00000522012 NPY5RQ15761 445 aa24.56■■□□□ 1.52
R3HCC1-208ENST00000522012 GALNT17Q6IS24 598 aa24.56■■□□□ 1.52
R3HCC1-208ENST00000522012 PPP1R18Q6NYC8 613 aa24.56■■□□□ 1.52
R3HCC1-208ENST00000522012 BLIDQ8IZY5 108 aa24.56■■□□□ 1.52
R3HCC1-208ENST00000522012 ZMYND12Q9H0C1 365 aa24.56■■□□□ 1.52
R3HCC1-208ENST00000522012 ZBED4O75132 1171 aa24.55■■□□□ 1.52
R3HCC1-208ENST00000522012 GNA11P29992 359 aa24.55■■□□□ 1.52
R3HCC1-208ENST00000522012 DSG3P32926 999 aa24.55■■□□□ 1.52
R3HCC1-208ENST00000522012 DNM1Q05193 864 aaKnown RBP24.55■■□□□ 1.52
R3HCC1-208ENST00000522012 TRAF1Q13077 416 aa24.55■■□□□ 1.52
R3HCC1-208ENST00000522012 ATG4CQ96DT6 458 aa24.55■■□□□ 1.52
R3HCC1-208ENST00000522012 NCLP19338 710 aaKnown RBP24.54■■□□□ 1.52
R3HCC1-208ENST00000522012 SPRYD7Q5W111 196 aa24.54■■□□□ 1.52
R3HCC1-208ENST00000522012 CLEC17AQ6ZS10 378 aa24.54■■□□□ 1.52
R3HCC1-208ENST00000522012 NOSTRINQ8IVI9 506 aa24.54■■□□□ 1.52
R3HCC1-208ENST00000522012 HOXC10Q9NYD6 342 aa24.54■■□□□ 1.52
R3HCC1-208ENST00000522012 AGTPBP1Q9UPW5 1226 aa24.54■■□□□ 1.52
R3HCC1-208ENST00000522012 BAZ2BQ9UIF8 2168 aaKnown RBP24.53■■□□□ 1.52
R3HCC1-208ENST00000522012 ESYT2A0FGR8 921 aa24.53■■□□□ 1.52
R3HCC1-208ENST00000522012 VWA5AO00534 786 aa24.53■■□□□ 1.52
R3HCC1-208ENST00000522012 ADAMTS3O15072 1205 aa24.53■■□□□ 1.52
R3HCC1-208ENST00000522012 TAL1P17542 331 aaPredicted RBP24.53■■□□□ 1.52
R3HCC1-208ENST00000522012 ADCY7P51828 1080 aa24.53■■□□□ 1.52
R3HCC1-208ENST00000522012 GTF2A2P52657 109 aa24.53■■□□□ 1.52
R3HCC1-208ENST00000522012 MOGSQ13724 837 aa24.53■■□□□ 1.52
R3HCC1-208ENST00000522012 SAPCD2Q86UD0 394 aa24.53■■□□□ 1.52
R3HCC1-208ENST00000522012 DAGLBQ8NCG7 672 aa24.53■■□□□ 1.52
R3HCC1-208ENST00000522012 SLC38A10Q9HBR0 1119 aa24.53■■□□□ 1.52
R3HCC1-208ENST00000522012 FDX1P10109 184 aa24.52■■□□□ 1.52
R3HCC1-208ENST00000522012 CETPP11597 493 aa24.52■■□□□ 1.52
R3HCC1-208ENST00000522012 HOXA7P31268 230 aaPredicted RBP24.52■■□□□ 1.52
R3HCC1-208ENST00000522012 ZNF157P51786 506 aaPredicted RBP24.52■■□□□ 1.52
R3HCC1-208ENST00000522012 CPXCR1Q8N123 301 aa24.52■■□□□ 1.52
R3HCC1-208ENST00000522012 BICD2Q8TD16 824 aa24.52■■□□□ 1.52
R3HCC1-208ENST00000522012 PSTPIP2Q9H939 334 aa24.52■■□□□ 1.52
R3HCC1-208ENST00000522012 RAVER2Q9HCJ3 691 aaKnown RBP24.52■■□□□ 1.52
R3HCC1-208ENST00000522012 ICAM1P05362 532 aa24.51■■□□□ 1.51
R3HCC1-208ENST00000522012 ZBTB48P10074 688 aaPredicted RBP24.51■■□□□ 1.51
R3HCC1-208ENST00000522012 IRX3P78415 501 aaPredicted RBP24.51■■□□□ 1.51
R3HCC1-208ENST00000522012 AGBL1Q96MI9 1066 aa24.51■■□□□ 1.51
R3HCC1-208ENST00000522012 ZNF396Q96N95 335 aaPredicted RBP24.51■■□□□ 1.51
R3HCC1-208ENST00000522012 TFIP11Q9UBB9 837 aaKnown RBP24.51■■□□□ 1.51
R3HCC1-208ENST00000522012 CCPG1Q9ULG6 757 aa24.51■■□□□ 1.51
R3HCC1-208ENST00000522012 ZNF536O15090 1300 aa24.51■■□□□ 1.51
R3HCC1-208ENST00000522012 MRPL12P52815 198 aaKnown RBP24.51■■□□□ 1.51
R3HCC1-208ENST00000522012 PABPC4Q13310 644 aaKnown RBP eCLIP24.51■■□□□ 1.518e-7■□□□□ 8.3
R3HCC1-208ENST00000522012 MYSM1Q5VVJ2 828 aa24.51■■□□□ 1.51
R3HCC1-208ENST00000522012 GPAT2Q6NUI2 795 aa24.51■■□□□ 1.51
R3HCC1-208ENST00000522012 RASGRP4Q8TDF6 673 aa24.51■■□□□ 1.51
R3HCC1-208ENST00000522012 CUL5Q93034 780 aa24.51■■□□□ 1.51
R3HCC1-208ENST00000522012 MS4A4AQ96JQ5 239 aa24.51■■□□□ 1.51
R3HCC1-208ENST00000522012 RIC8AQ9NPQ8 531 aa24.51■■□□□ 1.51
R3HCC1-208ENST00000522012 ABT1Q9ULW3 272 aaKnown RBP24.51■■□□□ 1.51
R3HCC1-208ENST00000522012 PCDHA6Q9UN73 950 aa24.51■■□□□ 1.51
R3HCC1-208ENST00000522012 CNPY2Q9Y2B0 182 aa24.51■■□□□ 1.51
R3HCC1-208ENST00000522012 PCDHA8Q9Y5H6 950 aa24.51■■□□□ 1.51
R3HCC1-208ENST00000522012 MYPNQ86TC9 1320 aa24.5■■□□□ 1.51
R3HCC1-208ENST00000522012 CCL15-CCL14A0A0B4J2E2 113 aa24.5■■□□□ 1.51
R3HCC1-208ENST00000522012 SPDYE16A6NNV3 312 aaPredicted RBP24.5■■□□□ 1.51
R3HCC1-208ENST00000522012 KRT85P78386 507 aa24.5■■□□□ 1.51
R3HCC1-208ENST00000522012 CCL15Q16663 113 aa24.5■■□□□ 1.51
R3HCC1-208ENST00000522012 RGMBQ6NW40 437 aa24.5■■□□□ 1.51
R3HCC1-208ENST00000522012 TNFRSF25Q93038 417 aa24.5■■□□□ 1.51
R3HCC1-208ENST00000522012 ADAMTS5Q9UNA0 930 aa24.5■■□□□ 1.51
R3HCC1-208ENST00000522012 TLL2Q9Y6L7 1015 aa24.5■■□□□ 1.51
R3HCC1-208ENST00000522012 TMEM88BA6NKF7 163 aa24.49■■□□□ 1.51
R3HCC1-208ENST00000522012 OSBPP22059 807 aa24.49■■□□□ 1.51
R3HCC1-208ENST00000522012 HTRA3P83110 453 aa24.49■■□□□ 1.51
R3HCC1-208ENST00000522012 EARS2Q5JPH6 523 aaKnown RBP24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms