RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-231ENST00000521941 SHISA4Q96DD7 197 aa9.79□□□□□ -0.84
CTNNA1-231ENST00000521941 DDX11Q96FC9 970 aa9.79□□□□□ -0.84
CTNNA1-231ENST00000521941 LRRC2Q9BYS8 371 aa9.79□□□□□ -0.84
CTNNA1-231ENST00000521941 SENP2Q9HC62 589 aa9.79□□□□□ -0.84
CTNNA1-231ENST00000521941 HMX1Q9NP08 348 aaPredicted RBP9.79□□□□□ -0.84
CTNNA1-231ENST00000521941 SLC5A4Q9NY91 659 aa9.79□□□□□ -0.84
CTNNA1-231ENST00000521941 MCM3APO60318 1980 aa9.78□□□□□ -0.84
CTNNA1-231ENST00000521941 PRC1O43663 620 aa9.78□□□□□ -0.84
CTNNA1-231ENST00000521941 PLA2G6O60733 806 aa9.78□□□□□ -0.84
CTNNA1-231ENST00000521941 GJB1P08034 283 aa9.78□□□□□ -0.84
CTNNA1-231ENST00000521941 PARP1P09874 1014 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-231ENST00000521941 SNHG28P0DPA3 235 aa9.78□□□□□ -0.84
CTNNA1-231ENST00000521941 FDX1P10109 184 aa9.78□□□□□ -0.84
CTNNA1-231ENST00000521941 ANTXR2P58335 489 aa9.78□□□□□ -0.84
CTNNA1-231ENST00000521941 COL9A3Q14050 684 aaPredicted RBP9.78□□□□□ -0.84
CTNNA1-231ENST00000521941 NECTIN1Q15223 517 aa9.78□□□□□ -0.84
CTNNA1-231ENST00000521941 USH1GQ495M9 461 aa9.78□□□□□ -0.84
CTNNA1-231ENST00000521941 ASPRV1Q53RT3 343 aa9.78□□□□□ -0.84
CTNNA1-231ENST00000521941 GPATCH4Q5T3I0 446 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-231ENST00000521941 RNF20Q5VTR2 975 aa9.78□□□□□ -0.84
CTNNA1-231ENST00000521941 ANO1Q5XXA6 986 aa9.78□□□□□ -0.84
CTNNA1-231ENST00000521941 NFXL1Q6ZNB6 911 aa9.78□□□□□ -0.84
CTNNA1-231ENST00000521941 RAB11FIP4Q86YS3 637 aa9.78□□□□□ -0.84
CTNNA1-231ENST00000521941 MAML3Q96JK9 1138 aa9.78□□□□□ -0.84
CTNNA1-231ENST00000521941 MYL10Q9BUA6 226 aa9.78□□□□□ -0.84
CTNNA1-231ENST00000521941 RANBP17Q9H2T7 1088 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-231ENST00000521941 ACAD9Q9H845 621 aa9.78□□□□□ -0.84
CTNNA1-231ENST00000521941 VAT1LQ9HCJ6 419 aa9.78□□□□□ -0.84
CTNNA1-231ENST00000521941 GPHNQ9NQX3 736 aaPredicted RBP9.78□□□□□ -0.84
CTNNA1-231ENST00000521941 ZNF536O15090 1300 aa9.78□□□□□ -0.84
CTNNA1-231ENST00000521941 RPTORQ8N122 1335 aa9.78□□□□□ -0.84
CTNNA1-231ENST00000521941 ATP2A1O14983 1001 aa9.77□□□□□ -0.85
CTNNA1-231ENST00000521941 TFRCP02786 760 aaKnown RBP9.77□□□□□ -0.85
CTNNA1-231ENST00000521941 HOXC6P09630 235 aa9.77□□□□□ -0.85
CTNNA1-231ENST00000521941 MCM5P33992 734 aa9.77□□□□□ -0.85
CTNNA1-231ENST00000521941 GJA8P48165 433 aa9.77□□□□□ -0.85
CTNNA1-231ENST00000521941 RGS19P49795 217 aa9.77□□□□□ -0.85
CTNNA1-231ENST00000521941 OAZ1P54368 228 aa9.77□□□□□ -0.85
CTNNA1-231ENST00000521941 CDC37Q16543 378 aaPredicted RBP9.77□□□□□ -0.85
CTNNA1-231ENST00000521941 MUM1L1Q5H9M0 696 aa9.77□□□□□ -0.85
CTNNA1-231ENST00000521941 PRAMEF19Q5SWL8 479 aa9.77□□□□□ -0.85
CTNNA1-231ENST00000521941 BTNL9Q6UXG8 535 aa9.77□□□□□ -0.85
CTNNA1-231ENST00000521941 NSMFQ6X4W1 530 aa9.77□□□□□ -0.85
CTNNA1-231ENST00000521941 ABRAQ8N0Z2 381 aa9.77□□□□□ -0.85
CTNNA1-231ENST00000521941 STAG2Q8N3U4 1231 aa9.77□□□□□ -0.85
CTNNA1-231ENST00000521941 CHST13Q8NET6 341 aa9.77□□□□□ -0.85
CTNNA1-231ENST00000521941 NUP133Q8WUM0 1156 aa9.77□□□□□ -0.85
CTNNA1-231ENST00000521941 ANKS1AQ92625 1134 aa9.77□□□□□ -0.85
CTNNA1-231ENST00000521941 TCEANC2Q96MN5 208 aa9.77□□□□□ -0.85
CTNNA1-231ENST00000521941 TRERF1Q96PN7 1200 aa9.77□□□□□ -0.85
CTNNA1-231ENST00000521941 PAK6Q9NQU5 681 aaPredicted RBP9.77□□□□□ -0.85
CTNNA1-231ENST00000521941 FBXO40Q9UH90 709 aa9.77□□□□□ -0.85
CTNNA1-231ENST00000521941 LCTP09848 1927 aa9.76□□□□□ -0.85
CTNNA1-231ENST00000521941 CCDC69A6NI79 296 aa9.76□□□□□ -0.85
CTNNA1-231ENST00000521941 FARP2O94887 1054 aaPredicted RBP9.76□□□□□ -0.85
CTNNA1-231ENST00000521941 SGPL1O95470 568 aa9.76□□□□□ -0.85
CTNNA1-231ENST00000521941 MYCNP04198 464 aaPredicted RBP9.76□□□□□ -0.85
CTNNA1-231ENST00000521941 ICAM1P05362 532 aa9.76□□□□□ -0.85
CTNNA1-231ENST00000521941 RXRAP19793 462 aa9.76□□□□□ -0.85
CTNNA1-231ENST00000521941 ZNF792Q3KQV3 632 aa9.76□□□□□ -0.85
CTNNA1-231ENST00000521941 MAP3K21Q5TCX8 1036 aa9.76□□□□□ -0.85
CTNNA1-231ENST00000521941 OLFML2BQ68BL8 750 aa9.76□□□□□ -0.85
CTNNA1-231ENST00000521941 CATIPQ7Z7H3 387 aa9.76□□□□□ -0.85
CTNNA1-231ENST00000521941 HOMER1Q86YM7 354 aa9.76□□□□□ -0.85
CTNNA1-231ENST00000521941 CCDC144CPQ8IYA2 1237 aa9.76□□□□□ -0.85
CTNNA1-231ENST00000521941 RASEFQ8IZ41 740 aa9.76□□□□□ -0.85
CTNNA1-231ENST00000521941 ADGRF4Q8IZF3 695 aa9.76□□□□□ -0.85
CTNNA1-231ENST00000521941 PIBF1Q8WXW3 757 aa9.76□□□□□ -0.85
CTNNA1-231ENST00000521941 LY9Q9HBG7 655 aa9.76□□□□□ -0.85
CTNNA1-231ENST00000521941 A1CFQ9NQ94 594 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-231ENST00000521941 PTPDC1A2A3K4 754 aa9.75□□□□□ -0.85
CTNNA1-231ENST00000521941 KLRF2D3W0D1 207 aa9.75□□□□□ -0.85
CTNNA1-231ENST00000521941 POTEB2H3BUK9 544 aa9.75□□□□□ -0.85
CTNNA1-231ENST00000521941 NFIBO00712 420 aa9.75□□□□□ -0.85
CTNNA1-231ENST00000521941 SH2B2O14492 632 aaPredicted RBP9.75□□□□□ -0.85
CTNNA1-231ENST00000521941 REC8O95072 547 aa9.75□□□□□ -0.85
CTNNA1-231ENST00000521941 CYBAP13498 195 aa9.75□□□□□ -0.85
CTNNA1-231ENST00000521941 CPA1P15085 419 aa9.75□□□□□ -0.85
CTNNA1-231ENST00000521941 CNTN2Q02246 1040 aa9.75□□□□□ -0.85
CTNNA1-231ENST00000521941 TKFCQ3LXA3 575 aa9.75□□□□□ -0.85
CTNNA1-231ENST00000521941 ADCK5Q3MIX3 580 aa9.75□□□□□ -0.85
CTNNA1-231ENST00000521941 ZNF654Q8IZM8 581 aa9.75□□□□□ -0.85
CTNNA1-231ENST00000521941 TRPV1Q8NER1 839 aa9.75□□□□□ -0.85
CTNNA1-231ENST00000521941 DIS3LQ8TF46 1054 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-231ENST00000521941 NEK1Q96PY6 1258 aa9.75□□□□□ -0.85
CTNNA1-231ENST00000521941 MAD2L2Q9UI95 211 aa9.75□□□□□ -0.85
CTNNA1-231ENST00000521941 ZHX1Q9UKY1 873 aaPredicted RBP9.75□□□□□ -0.85
CTNNA1-231ENST00000521941 NAP1L2Q9ULW6 460 aaPredicted RBP9.75□□□□□ -0.85
CTNNA1-231ENST00000521941 DDX49Q9Y6V7 483 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-231ENST00000521941 LRRC37A2A6NM11 1700 aa9.75□□□□□ -0.85
CTNNA1-231ENST00000521941 BAZ2BQ9UIF8 2168 aaKnown RBP9.74□□□□□ -0.85
CTNNA1-231ENST00000521941 CALML3P27482 149 aa9.74□□□□□ -0.85
CTNNA1-231ENST00000521941 FGD1P98174 961 aa9.74□□□□□ -0.85
CTNNA1-231ENST00000521941 GRM4Q14833 912 aa9.74□□□□□ -0.85
CTNNA1-231ENST00000521941 QRICH1Q2TAL8 776 aa9.74□□□□□ -0.85
CTNNA1-231ENST00000521941 SLC30A10Q6XR72 485 aa9.74□□□□□ -0.85
CTNNA1-231ENST00000521941 MICU3Q86XE3 530 aa9.74□□□□□ -0.85
CTNNA1-231ENST00000521941 CTCFLQ8NI51 663 aaPredicted RBP9.74□□□□□ -0.85
CTNNA1-231ENST00000521941 IGDCC4Q8TDY8 1250 aa9.74□□□□□ -0.85
CTNNA1-231ENST00000521941 LENG1Q96BZ8 264 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms