RNA–Protein interactions for RNA: ENST00000521260.1

NPM1-207, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-207ENST00000521260 NRBP1Q9UHY1 535 aa5.72□□□□□ -1.49
NPM1-207ENST00000521260 R3HDM2Q9Y2K5 976 aaKnown RBP5.72□□□□□ -1.49
NPM1-207ENST00000521260 SLC27A5Q9Y2P5 690 aa5.72□□□□□ -1.49
NPM1-207ENST00000521260 COMMD3-BMI1R4GMX3 469 aa5.72□□□□□ -1.49
NPM1-207ENST00000521260 YTHDC2Q9H6S0 1430 aaKnown RBP5.72□□□□□ -1.49
NPM1-207ENST00000521260 ADGRL3Q9HAR2 1447 aa5.72□□□□□ -1.49
NPM1-207ENST00000521260 KIF24Q5T7B8 1368 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 ABCC11Q96J66 1382 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 GPR75-ASB3A0A0A6YYF3 556 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 TMEM247A6NEH6 219 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 FAM25EA8MYX2 175 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 H0YC42 278 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 WNT7AO00755 349 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 GADD45BO75293 160 aaPredicted RBP5.71□□□□□ -1.5
NPM1-207ENST00000521260 TACC1O75410 805 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 WFS1O76024 890 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 LMNAP02545 664 aaKnown RBP5.71□□□□□ -1.5
NPM1-207ENST00000521260 HNRNPCP07910 306 aaKnown RBP eCLIP5.71□□□□□ -1.58e-9■□□□□ 11.2
NPM1-207ENST00000521260 ZFYP08048 801 aaPredicted RBP5.71□□□□□ -1.5
NPM1-207ENST00000521260 CCNCP24863 283 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 S100A5P33763 92 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 MATR3P43243 847 aaKnown RBP eCLIP5.71□□□□□ -1.5
NPM1-207ENST00000521260 CD97P48960 835 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 TPD52P55327 224 aaPredicted RBP5.71□□□□□ -1.5
NPM1-207ENST00000521260 ATP2B2Q01814 1243 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 KLC1Q07866 573 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 NONOQ15233 471 aaKnown RBP eCLIP5.71□□□□□ -1.5
NPM1-207ENST00000521260 ADRM1Q16186 407 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 Q3C1V9 767 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 PABPC1LQ4VXU2 614 aaKnown RBP5.71□□□□□ -1.5
NPM1-207ENST00000521260 ARMC3Q5W041 872 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 LARP1BQ659C4 914 aaKnown RBP5.71□□□□□ -1.5
NPM1-207ENST00000521260 ATL3Q6DD88 541 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 SND1Q7KZF4 910 aaKnown RBP eCLIP5.71□□□□□ -1.5
NPM1-207ENST00000521260 C11orf74Q86VG3 221 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 HOOK3Q86VS8 718 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 PLEKHM2Q8IWE5 1019 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 MYO1HQ8N1T3 1032 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 ANKRD44Q8N8A2 993 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 SYT2Q8N9I0 419 aaPredicted RBP5.71□□□□□ -1.5
NPM1-207ENST00000521260 PNMA1Q8ND90 353 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 NSUN7Q8NE18 718 aaKnown RBP5.71□□□□□ -1.5
NPM1-207ENST00000521260 WDR60Q8WVS4 1066 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 HVCN1Q96D96 273 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 ITPKCQ96DU7 683 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 SNX27Q96L92 541 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 OLFM3Q96PB7 478 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 NDNQ99608 321 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 SH3GL2Q99962 352 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 RTFDC1Q9BY42 306 aaPredicted RBP5.71□□□□□ -1.5
NPM1-207ENST00000521260 UPF3BQ9BZI7 483 aaKnown RBP5.71□□□□□ -1.5
NPM1-207ENST00000521260 KAT14Q9H8E8 782 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 SENP2Q9HC62 589 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 SH2B1Q9NRF2 756 aaPredicted RBP5.71□□□□□ -1.5
NPM1-207ENST00000521260 IL1RAPL1Q9NZN1 696 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 TBC1D7Q9P0N9 293 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 SUCLA2Q9P2R7 463 aaPredicted RBP5.71□□□□□ -1.5
NPM1-207ENST00000521260 BIN2Q9UBW5 565 aaPredicted RBP5.71□□□□□ -1.5
NPM1-207ENST00000521260 BAIAP2L1Q9UHR4 511 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 DSEQ9UL01 958 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 CFAP45Q9UL16 551 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 PNMA2Q9UL42 364 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 MTUS1Q9ULD2 1270 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 PPP1R9AQ9ULJ8 1098 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 TTC7AQ9ULT0 858 aaPredicted RBP5.71□□□□□ -1.5
NPM1-207ENST00000521260 AMOTL2Q9Y2J4 779 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 C2CD2Q9Y426 696 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 ASB3Q9Y575 518 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 IVNS1ABPQ9Y6Y0 642 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 PCF11O94913 1555 aaKnown RBP5.71□□□□□ -1.5
NPM1-207ENST00000521260 ZC3H4Q9UPT8 1303 aaKnown RBP5.71□□□□□ -1.5
NPM1-207ENST00000521260 CDC42BPAQ5VT25 1732 aa5.71□□□□□ -1.5
NPM1-207ENST00000521260 COL17A1Q9UMD9 1497 aaPredicted RBP5.71□□□□□ -1.5
NPM1-207ENST00000521260 NSD2O96028 1365 aa5.7□□□□□ -1.5
NPM1-207ENST00000521260 MSH6P52701 1360 aa5.7□□□□□ -1.5
NPM1-207ENST00000521260 PIK3R4Q99570 1358 aa5.7□□□□□ -1.5
NPM1-207ENST00000521260 CTAGE9A4FU28 777 aa5.7□□□□□ -1.5
NPM1-207ENST00000521260 PABPN1LA6NDY0 278 aaKnown RBP5.7□□□□□ -1.5
NPM1-207ENST00000521260 N4BP3O15049 544 aa5.7□□□□□ -1.5
NPM1-207ENST00000521260 FIBPO43427 364 aa5.7□□□□□ -1.5
NPM1-207ENST00000521260 IDH3BO43837 385 aa5.7□□□□□ -1.5
NPM1-207ENST00000521260 CLASP2O75122 1294 aaKnown RBP5.7□□□□□ -1.5
NPM1-207ENST00000521260 HIP1RO75146 1068 aa5.7□□□□□ -1.5
NPM1-207ENST00000521260 SYF2O95926 243 aaKnown RBP5.7□□□□□ -1.5
NPM1-207ENST00000521260 CLTAP09496 248 aa5.7□□□□□ -1.5
NPM1-207ENST00000521260 FBXO45P0C2W1 286 aa5.7□□□□□ -1.5
NPM1-207ENST00000521260 LINGO3P0C6S8 592 aa5.7□□□□□ -1.5
NPM1-207ENST00000521260 ATP2A2P16615 1042 aaKnown RBP5.7□□□□□ -1.5
NPM1-207ENST00000521260 KRT4P19013 534 aa5.7□□□□□ -1.5
NPM1-207ENST00000521260 ERCC5P28715 1186 aaPredicted RBP5.7□□□□□ -1.5
NPM1-207ENST00000521260 PPP2R1AP30153 589 aa5.7□□□□□ -1.5
NPM1-207ENST00000521260 SCNN1BP51168 640 aa5.7□□□□□ -1.5
NPM1-207ENST00000521260 ZNF132P52740 706 aa5.7□□□□□ -1.5
NPM1-207ENST00000521260 POLE2P56282 527 aa5.7□□□□□ -1.5
NPM1-207ENST00000521260 NNTQ13423 1086 aa5.7□□□□□ -1.5
NPM1-207ENST00000521260 ARHGEF6Q15052 776 aa5.7□□□□□ -1.5
NPM1-207ENST00000521260 TAF11Q15544 211 aa5.7□□□□□ -1.5
NPM1-207ENST00000521260 GLE1Q53GS7 698 aaKnown RBP5.7□□□□□ -1.5
NPM1-207ENST00000521260 TTC22Q5TAA0 569 aa5.7□□□□□ -1.5
NPM1-207ENST00000521260 SPECC1LQ69YQ0 1117 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms