RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 LRRC8AQ8IWT6 810 aa11.29□□□□□ -0.6
SPARC-202ENST00000520687 STAG2Q8N3U4 1231 aa11.29□□□□□ -0.6
SPARC-202ENST00000520687 SLC44A5Q8NCS7 719 aa11.29□□□□□ -0.6
SPARC-202ENST00000520687 SYMPKQ92797 1274 aaKnown RBP11.29□□□□□ -0.6
SPARC-202ENST00000520687 ZNF622Q969S3 477 aaKnown RBP eCLIP11.29□□□□□ -0.6
SPARC-202ENST00000520687 CEP95Q96GE4 821 aa11.29□□□□□ -0.6
SPARC-202ENST00000520687 CLEC11AQ9Y240 323 aa11.29□□□□□ -0.6
SPARC-202ENST00000520687 DICER1Q9UPY3 1922 aaKnown RBP11.29□□□□□ -0.6
SPARC-202ENST00000520687 DDX60LQ5H9U9 1706 aaKnown RBP11.29□□□□□ -0.6
SPARC-202ENST00000520687 FOCADQ5VW36 1801 aa11.29□□□□□ -0.6
SPARC-202ENST00000520687 CASP8AP2Q9UKL3 1982 aa11.29□□□□□ -0.6
SPARC-202ENST00000520687 CCP110O43303 1012 aa11.28□□□□□ -0.6
SPARC-202ENST00000520687 DDNO94850 711 aaPredicted RBP11.28□□□□□ -0.6
SPARC-202ENST00000520687 FXR1P51114 621 aaKnown RBP eCLIP11.28□□□□□ -0.6
SPARC-202ENST00000520687 GRM1Q13255 1194 aa11.28□□□□□ -0.6
SPARC-202ENST00000520687 EAPPQ56P03 285 aaPredicted RBP11.28□□□□□ -0.6
SPARC-202ENST00000520687 EARS2Q5JPH6 523 aaKnown RBP11.28□□□□□ -0.6
SPARC-202ENST00000520687 DNTTIP2Q5QJE6 756 aaKnown RBP11.28□□□□□ -0.6
SPARC-202ENST00000520687 WWC2Q6AWC2 1192 aa11.28□□□□□ -0.6
SPARC-202ENST00000520687 MCTP2Q6DN12 878 aa11.28□□□□□ -0.6
SPARC-202ENST00000520687 CDC42EP5Q6NZY7 148 aa11.28□□□□□ -0.6
SPARC-202ENST00000520687 DTHD1Q6ZMT9 781 aa11.28□□□□□ -0.6
SPARC-202ENST00000520687 CERS5Q8N5B7 392 aa11.28□□□□□ -0.6
SPARC-202ENST00000520687 TTLL6Q8N841 843 aa11.28□□□□□ -0.6
SPARC-202ENST00000520687 C4orf32Q8N8J7 132 aa11.28□□□□□ -0.6
SPARC-202ENST00000520687 CCDC112Q8NEF3 446 aa11.28□□□□□ -0.6
SPARC-202ENST00000520687 ERCC4Q92889 916 aaPredicted RBP11.28□□□□□ -0.6
SPARC-202ENST00000520687 PAGE5Q96GU1 130 aa11.28□□□□□ -0.6
SPARC-202ENST00000520687 L3MBTL3Q96JM7 780 aaPredicted RBP11.28□□□□□ -0.6
SPARC-202ENST00000520687 MAP7D2Q96T17 732 aa11.28□□□□□ -0.6
SPARC-202ENST00000520687 NAP1L4Q99733 375 aaKnown RBP11.28□□□□□ -0.6
SPARC-202ENST00000520687 IDI2Q9BXS1 227 aa11.28□□□□□ -0.6
SPARC-202ENST00000520687 SERPINA10Q9UK55 444 aa11.28□□□□□ -0.6
SPARC-202ENST00000520687 PCDHA6Q9UN73 950 aa11.28□□□□□ -0.6
SPARC-202ENST00000520687 PCDHA8Q9Y5H6 950 aa11.28□□□□□ -0.6
SPARC-202ENST00000520687 VWA3AA6NCI4 1184 aa11.28□□□□□ -0.6
SPARC-202ENST00000520687 FAM205CA6NFA0 338 aa11.28□□□□□ -0.6
SPARC-202ENST00000520687 KIF2AO00139 706 aaPredicted RBP11.28□□□□□ -0.6
SPARC-202ENST00000520687 CYTH3O43739 400 aa11.28□□□□□ -0.6
SPARC-202ENST00000520687 GTPBP6O43824 516 aaPredicted RBP11.28□□□□□ -0.6
SPARC-202ENST00000520687 CRKP46108 304 aa11.28□□□□□ -0.6
SPARC-202ENST00000520687 NAPAP54920 295 aa11.28□□□□□ -0.6
SPARC-202ENST00000520687 GRIN1Q05586 938 aa11.28□□□□□ -0.6
SPARC-202ENST00000520687 NONOQ15233 471 aaKnown RBP eCLIP11.28□□□□□ -0.6
SPARC-202ENST00000520687 APOBEC3HQ6NTF7 200 aaKnown RBP11.28□□□□□ -0.6
SPARC-202ENST00000520687 FBXW7Q969H0 707 aa11.28□□□□□ -0.6
SPARC-202ENST00000520687 DHX58Q96C10 678 aa11.28□□□□□ -0.6
SPARC-202ENST00000520687 CCSER1Q9C0I3 900 aa11.28□□□□□ -0.6
SPARC-202ENST00000520687 VPS33BQ9H267 617 aa11.28□□□□□ -0.6
SPARC-202ENST00000520687 IFNKQ9P0W0 207 aa11.28□□□□□ -0.6
SPARC-202ENST00000520687 SYNPO2Q9UMS6 1093 aa11.28□□□□□ -0.6
SPARC-202ENST00000520687 SERPINC1P01008 464 aa11.27□□□□□ -0.61
SPARC-202ENST00000520687 MCM7P33993 719 aa11.27□□□□□ -0.61
SPARC-202ENST00000520687 UBASH3AP57075 661 aa11.27□□□□□ -0.61
SPARC-202ENST00000520687 DPYDQ12882 1025 aa11.27□□□□□ -0.61
SPARC-202ENST00000520687 DOK7Q18PE1 504 aa11.27□□□□□ -0.61
SPARC-202ENST00000520687 SPECC1Q5M775 1068 aa11.27□□□□□ -0.61
SPARC-202ENST00000520687 CYP4F22Q6NT55 531 aa11.27□□□□□ -0.61
SPARC-202ENST00000520687 PNMA8AQ86V59 439 aaPredicted RBP11.27□□□□□ -0.61
SPARC-202ENST00000520687 CACTINQ8WUQ7 758 aaKnown RBP11.27□□□□□ -0.61
SPARC-202ENST00000520687 EPSTI1Q96J88 318 aa11.27□□□□□ -0.61
SPARC-202ENST00000520687 CTAGE1Q96RT6 745 aa11.27□□□□□ -0.61
SPARC-202ENST00000520687 XPO4Q9C0E2 1151 aaKnown RBP11.27□□□□□ -0.61
SPARC-202ENST00000520687 PI4KBQ9UBF8 816 aa11.27□□□□□ -0.61
SPARC-202ENST00000520687 PYCARDQ9ULZ3 195 aa11.27□□□□□ -0.61
SPARC-202ENST00000520687 R3HCC1Q9Y3T6 440 aaKnown RBP11.27□□□□□ -0.61
SPARC-202ENST00000520687 MYH6P13533 1939 aa11.27□□□□□ -0.61
SPARC-202ENST00000520687 ADAMTSL1Q8N6G6 1762 aa11.26□□□□□ -0.61
SPARC-202ENST00000520687 PNMA6FA0A0J9YX94 578 aa11.26□□□□□ -0.61
SPARC-202ENST00000520687 SMCO2A6NFE2 343 aa11.26□□□□□ -0.61
SPARC-202ENST00000520687 SLC26A4O43511 780 aa11.26□□□□□ -0.61
SPARC-202ENST00000520687 ENTPD3O75355 529 aa11.26□□□□□ -0.61
SPARC-202ENST00000520687 PDHBP11177 359 aa11.26□□□□□ -0.61
SPARC-202ENST00000520687 SKILP12757 684 aa11.26□□□□□ -0.61
SPARC-202ENST00000520687 SFPQP23246 707 aaKnown RBP eCLIP11.26□□□□□ -0.61
SPARC-202ENST00000520687 PPP1R2P41236 205 aa11.26□□□□□ -0.61
SPARC-202ENST00000520687 E2F4Q16254 413 aa11.26□□□□□ -0.61
SPARC-202ENST00000520687 SLC4A8Q2Y0W8 1093 aa11.26□□□□□ -0.61
SPARC-202ENST00000520687 DACT2Q5SW24 774 aa11.26□□□□□ -0.61
SPARC-202ENST00000520687 SPATA1Q5VX52 437 aa11.26□□□□□ -0.61
SPARC-202ENST00000520687 SLC51AQ86UW1 340 aa11.26□□□□□ -0.61
SPARC-202ENST00000520687 SLC17A8Q8NDX2 589 aa11.26□□□□□ -0.61
SPARC-202ENST00000520687 MKL1Q969V6 931 aa11.26□□□□□ -0.61
SPARC-202ENST00000520687 KANSL2Q9H9L4 492 aa11.26□□□□□ -0.61
SPARC-202ENST00000520687 NYAP2Q9P242 653 aa11.26□□□□□ -0.61
SPARC-202ENST00000520687 NRBP1Q9UHY1 535 aa11.26□□□□□ -0.61
SPARC-202ENST00000520687 COL2A1P02458 1487 aaPredicted RBP11.26□□□□□ -0.61
SPARC-202ENST00000520687 SLX4Q8IY92 1834 aa11.25□□□□□ -0.61
SPARC-202ENST00000520687 DYNC1I1O14576 645 aa11.25□□□□□ -0.61
SPARC-202ENST00000520687 ZNF18P17022 549 aa11.25□□□□□ -0.61
SPARC-202ENST00000520687 LMOD1P29536 600 aaPredicted RBP11.25□□□□□ -0.61
SPARC-202ENST00000520687 SHMT1P34896 483 aa11.25□□□□□ -0.61
SPARC-202ENST00000520687 UBA7P41226 1012 aa11.25□□□□□ -0.61
SPARC-202ENST00000520687 ZNF543Q08ER8 600 aa11.25□□□□□ -0.61
SPARC-202ENST00000520687 TRAF1Q13077 416 aa11.25□□□□□ -0.61
SPARC-202ENST00000520687 PICALMQ13492 652 aa11.25□□□□□ -0.61
SPARC-202ENST00000520687 SLC35G1Q2M3R5 365 aa11.25□□□□□ -0.61
SPARC-202ENST00000520687 CCDC144BQ3MJ40 725 aa11.25□□□□□ -0.61
SPARC-202ENST00000520687 USP17L2Q6R6M4 530 aa11.25□□□□□ -0.61
SPARC-202ENST00000520687 USP49Q70CQ1 688 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms