RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 TSGA10IPQ3SY00 556 aa6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 FAM47AQ5JRC9 791 aa6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 MCTP2Q6DN12 878 aa6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 DHX32Q7L7V1 743 aaKnown RBP6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 ABRAQ8N0Z2 381 aa6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 SAMD3Q8N6K7 520 aa6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 ZNF713Q8N859 430 aaPredicted RBP6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 CHST13Q8NET6 341 aa6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 NKX2-3Q8TAU0 364 aa6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 KIFC2Q96AC6 838 aa6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 PPP1R9BQ96SB3 815 aa6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 NUDT12Q9BQG2 462 aa6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 PAGR1Q9BTK6 254 aa6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 C22orf23Q9BZE7 217 aa6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 LSG1Q9H089 658 aaKnown RBP6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 EHMT1Q9H9B1 1298 aa6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 MORF4L1Q9UBU8 362 aa6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 BIN2Q9UBW5 565 aaPredicted RBP6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 PPP1R9AQ9ULJ8 1098 aa6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 NAP1L2Q9ULW6 460 aaPredicted RBP6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 LOC285556D6RIA3 1793 aa6.54□□□□□ -1.36
CTNNA1-220ENST00000520260 NEDD4P46934 1319 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 LOC102724159A0A0B4J2E5 919 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 IGKV6D-41A0A0C4DH26 115 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 TMEM232C9JQI7 657 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 CPLX1O14810 134 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 ATP2A1O14983 1001 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 SMARCA1P28370 1054 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 HSPA4P34932 840 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 GJA5P36382 358 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 PSMC4P43686 418 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 RBM25P49756 843 aaKnown RBP6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 ERVK-9P63128 1117 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 ERVK-24P63145 666 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 CCDC173Q0VFZ6 552 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 PWP2Q15269 919 aaKnown RBP6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 SLFNL1Q499Z3 407 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 SLC9C1Q4G0N8 1177 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 FAM83BQ5T0W9 1011 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 MFSD14CQ5VZR4 134 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 FBXO46Q6PJ61 603 aaPredicted RBP6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 C17orf99Q6UX52 265 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 CLEC17AQ6ZS10 378 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 PLEKHH3Q7Z736 793 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 TBC1D10CQ8IV04 446 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 HSCBQ8IWL3 235 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 TRIM22Q8IYM9 498 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 SPICE1Q8N0Z3 855 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 LRRC47Q8N1G4 583 aaKnown RBP6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 MSL3Q8N5Y2 521 aaKnown RBP6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 ANKRD13CQ8N6S4 541 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 ZNF296Q8WUU4 475 aaPredicted RBP6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 WASF1Q92558 559 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 ANKS1AQ92625 1134 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 CUL5Q93034 780 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 RRP36Q96EU6 259 aaKnown RBP6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 DDX11Q96FC9 970 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 JAKMIP1Q96N16 626 aaKnown RBP6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 MAP7D2Q96T17 732 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 TM6SF1Q9BZW5 370 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 EMILIN3Q9NT22 766 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 MAP3K20Q9NYL2 800 aaKnown RBP6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 ZSWIM5Q9P217 1185 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 ADD3Q9UEY8 706 aaKnown RBP6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 CPA4Q9UI42 421 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 TRIM17Q9Y577 477 aa6.53□□□□□ -1.36
CTNNA1-220ENST00000520260 SLC15A5A6NIM6 579 aa6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 VWA5AO00534 786 aa6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 ZBTB43O43298 467 aa6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 MSCO60682 206 aa6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 OFD1O75665 1012 aa6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 CYP2C8P10632 490 aa6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 XRCC5P13010 732 aaKnown RBP6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 CASTP20810 708 aaKnown RBP6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 STAT3P40763 770 aa6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 MCM2P49736 904 aa6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 ZNF543Q08ER8 600 aa6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 IRF5Q13568 498 aa6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 DGKZQ13574 1117 aa6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 NECTIN1Q15223 517 aa6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 HS1BP3Q53T59 392 aa6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 TREML2Q5T2D2 321 aa6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 SYDE2Q5VT97 1194 aa6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 GPAT2Q6NUI2 795 aa6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 DPP9Q86TI2 863 aa6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 NCAPG2Q86XI2 1143 aa6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 TNS4Q8IZW8 715 aa6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 FAM177A1Q8N128 213 aaPredicted RBP6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 ANKRD35Q8N283 1001 aa6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 ENAHQ8N8S7 591 aaPredicted RBP6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 ACER1Q8TDN7 264 aa6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 NUP133Q8WUM0 1156 aa6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 TRIM44Q96DX7 344 aaPredicted RBP6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 GBP4Q96PP9 640 aa6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 APBA2Q99767 749 aa6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 PTPN18Q99952 460 aa6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 TMEM47Q9BQJ4 181 aa6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 SPATC1LQ9H0A9 340 aa6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 ACAD9Q9H845 621 aa6.52□□□□□ -1.37
CTNNA1-220ENST00000520260 NRBP1Q9UHY1 535 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms