RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 SF1Q15637 639 aaKnown RBP7.37□□□□□ -1.23
HMGB1P46-201ENST00000520062 NTRK3Q16288 839 aa7.37□□□□□ -1.23
HMGB1P46-201ENST00000520062 OGFOD3Q6PK18 319 aa7.37□□□□□ -1.23
HMGB1P46-201ENST00000520062 BRAPQ7Z569 592 aa7.37□□□□□ -1.23
HMGB1P46-201ENST00000520062 AFAP1L2Q8N4X5 818 aa7.37□□□□□ -1.23
HMGB1P46-201ENST00000520062 DAGLBQ8NCG7 672 aa7.37□□□□□ -1.23
HMGB1P46-201ENST00000520062 GATA6Q92908 595 aa7.37□□□□□ -1.23
HMGB1P46-201ENST00000520062 GPR62Q9BZJ7 368 aa7.37□□□□□ -1.23
HMGB1P46-201ENST00000520062 RNF112Q9ULX5 631 aa7.37□□□□□ -1.23
HMGB1P46-201ENST00000520062 GPR55Q9Y2T6 319 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P46-201ENST00000520062 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P46-201ENST00000520062 ALG1L2C9J202 215 aa7.36□□□□□ -1.23
HMGB1P46-201ENST00000520062 H0Y8X5 98 aa7.36□□□□□ -1.23
HMGB1P46-201ENST00000520062 CPEP16870 476 aa7.36□□□□□ -1.23
HMGB1P46-201ENST00000520062 NAT1P18440 290 aa7.36□□□□□ -1.23
HMGB1P46-201ENST00000520062 TESK1Q15569 626 aa7.36□□□□□ -1.23
HMGB1P46-201ENST00000520062 CYP27C1Q4G0S4 372 aa7.36□□□□□ -1.23
HMGB1P46-201ENST00000520062 ACBD5Q5T8D3 534 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P46-201ENST00000520062 CWF19L1Q69YN2 538 aaKnown RBP7.36□□□□□ -1.23
HMGB1P46-201ENST00000520062 STYK1Q6J9G0 422 aa7.36□□□□□ -1.23
HMGB1P46-201ENST00000520062 CNNM4Q6P4Q7 775 aa7.36□□□□□ -1.23
HMGB1P46-201ENST00000520062 ZAR1Q86SH2 424 aa7.36□□□□□ -1.23
HMGB1P46-201ENST00000520062 FERMT3Q86UX7 667 aa7.36□□□□□ -1.23
HMGB1P46-201ENST00000520062 DDX42Q86XP3 938 aaKnown RBP eCLIP7.36□□□□□ -1.23
HMGB1P46-201ENST00000520062 JAMLQ86YT9 394 aa7.36□□□□□ -1.23
HMGB1P46-201ENST00000520062 ZNF655Q8N720 491 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P46-201ENST00000520062 DCAF4Q8WV16 495 aa7.36□□□□□ -1.23
HMGB1P46-201ENST00000520062 COPS5Q92905 334 aa7.36□□□□□ -1.23
HMGB1P46-201ENST00000520062 HDAC8Q9BY41 377 aa7.36□□□□□ -1.23
HMGB1P46-201ENST00000520062 CAPN6Q9Y6Q1 641 aa7.36□□□□□ -1.23
HMGB1P46-201ENST00000520062 B4E1Z4 1266 aa7.35□□□□□ -1.23
HMGB1P46-201ENST00000520062 AQP7O14520 342 aa7.35□□□□□ -1.23
HMGB1P46-201ENST00000520062 VAMP4O75379 141 aa7.35□□□□□ -1.23
HMGB1P46-201ENST00000520062 CBX7O95931 251 aa7.35□□□□□ -1.23
HMGB1P46-201ENST00000520062 S100BP04271 92 aaPredicted RBP7.35□□□□□ -1.23
HMGB1P46-201ENST00000520062 APPP05067 770 aa7.35□□□□□ -1.23
HMGB1P46-201ENST00000520062 SRFP11831 508 aa7.35□□□□□ -1.23
HMGB1P46-201ENST00000520062 IGFALSP35858 605 aa7.35□□□□□ -1.23
HMGB1P46-201ENST00000520062 FLT3P36888 993 aa7.35□□□□□ -1.23
HMGB1P46-201ENST00000520062 CDKN1CP49918 316 aaPredicted RBP7.35□□□□□ -1.23
HMGB1P46-201ENST00000520062 CYP27A1Q02318 531 aa7.35□□□□□ -1.23
HMGB1P46-201ENST00000520062 CYP4F3Q08477 520 aa7.35□□□□□ -1.23
HMGB1P46-201ENST00000520062 WWC2Q6AWC2 1192 aa7.35□□□□□ -1.23
HMGB1P46-201ENST00000520062 RSPO2Q6UXX9 243 aaPredicted RBP7.35□□□□□ -1.23
HMGB1P46-201ENST00000520062 DDX46Q7L014 1031 aaKnown RBP7.35□□□□□ -1.23
HMGB1P46-201ENST00000520062 MFSD4AQ8N468 514 aa7.35□□□□□ -1.23
HMGB1P46-201ENST00000520062 MAGEB10Q96LZ2 347 aaPredicted RBP7.35□□□□□ -1.23
HMGB1P46-201ENST00000520062 HEXIM2Q96MH2 286 aaKnown RBP7.35□□□□□ -1.23
HMGB1P46-201ENST00000520062 CEP89Q96ST8 783 aa7.35□□□□□ -1.23
HMGB1P46-201ENST00000520062 ZFYVE21Q9BQ24 234 aa7.35□□□□□ -1.23
HMGB1P46-201ENST00000520062 ST14Q9Y5Y6 855 aa7.35□□□□□ -1.23
HMGB1P46-201ENST00000520062 FAM83GA6ND36 823 aa7.34□□□□□ -1.23
HMGB1P46-201ENST00000520062 GNAT3A8MTJ3 354 aa7.34□□□□□ -1.23
HMGB1P46-201ENST00000520062 AURKAO14965 403 aa7.34□□□□□ -1.23
HMGB1P46-201ENST00000520062 BMP8BP34820 402 aa7.34□□□□□ -1.23
HMGB1P46-201ENST00000520062 CTSKP43235 329 aa7.34□□□□□ -1.23
HMGB1P46-201ENST00000520062 NOP2P46087 812 aaKnown RBP7.34□□□□□ -1.23
HMGB1P46-201ENST00000520062 EXOSC10Q01780 885 aaKnown RBP7.34□□□□□ -1.23
HMGB1P46-201ENST00000520062 TNK2Q07912 1038 aa7.34□□□□□ -1.23
HMGB1P46-201ENST00000520062 SCRN1Q12765 414 aa7.34□□□□□ -1.23
HMGB1P46-201ENST00000520062 DHCR24Q15392 516 aa7.34□□□□□ -1.23
HMGB1P46-201ENST00000520062 ANKLE2Q86XL3 938 aa7.34□□□□□ -1.23
HMGB1P46-201ENST00000520062 KREMEN2Q8NCW0 462 aa7.34□□□□□ -1.23
HMGB1P46-201ENST00000520062 SCLYQ96I15 445 aa7.34□□□□□ -1.23
HMGB1P46-201ENST00000520062 TBC1D32Q96NH3 1257 aa7.34□□□□□ -1.23
HMGB1P46-201ENST00000520062 FAM126AQ9BYI3 521 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P46-201ENST00000520062 TNPO3Q9Y5L0 923 aaKnown RBP7.34□□□□□ -1.23
HMGB1P46-201ENST00000520062 BACE2Q9Y5Z0 518 aa7.34□□□□□ -1.23
HMGB1P46-201ENST00000520062 TCRBV16S1A1N1A0A5B0 115 aa7.33□□□□□ -1.24
HMGB1P46-201ENST00000520062 BLACEA4D250 179 aa7.33□□□□□ -1.24
HMGB1P46-201ENST00000520062 OPA1O60313 960 aa7.33□□□□□ -1.24
HMGB1P46-201ENST00000520062 ECI1P42126 302 aa7.33□□□□□ -1.24
HMGB1P46-201ENST00000520062 INSM1Q01101 510 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P46-201ENST00000520062 CLEC16AQ2KHT3 1053 aa7.33□□□□□ -1.24
HMGB1P46-201ENST00000520062 USP53Q70EK8 1073 aa7.33□□□□□ -1.24
HMGB1P46-201ENST00000520062 FGD2Q7Z6J4 655 aa7.33□□□□□ -1.24
HMGB1P46-201ENST00000520062 UBR7Q8N806 425 aa7.33□□□□□ -1.24
HMGB1P46-201ENST00000520062 NPLOC4Q8TAT6 608 aa7.33□□□□□ -1.24
HMGB1P46-201ENST00000520062 TRIT1Q9H3H1 467 aaKnown RBP7.33□□□□□ -1.24
HMGB1P46-201ENST00000520062 MKNK2Q9HBH9 465 aa7.33□□□□□ -1.24
HMGB1P46-201ENST00000520062 NPFFR2Q9Y5X5 522 aa7.33□□□□□ -1.24
HMGB1P46-201ENST00000520062 SHISA3A0PJX4 238 aa7.32□□□□□ -1.24
HMGB1P46-201ENST00000520062 PRR33A8MZF0 331 aa7.32□□□□□ -1.24
HMGB1P46-201ENST00000520062 EYA4O95677 639 aa7.32□□□□□ -1.24
HMGB1P46-201ENST00000520062 ADMP35318 185 aa7.32□□□□□ -1.24
HMGB1P46-201ENST00000520062 PRSS53Q2L4Q9 553 aa7.32□□□□□ -1.24
HMGB1P46-201ENST00000520062 DPY19L1Q2PZI1 675 aa7.32□□□□□ -1.24
HMGB1P46-201ENST00000520062 E4F1Q66K89 784 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P46-201ENST00000520062 DENND5AQ6IQ26 1287 aa7.32□□□□□ -1.24
HMGB1P46-201ENST00000520062 RCSD1Q6JBY9 416 aa7.32□□□□□ -1.24
HMGB1P46-201ENST00000520062 CRTC3Q6UUV7 619 aa7.32□□□□□ -1.24
HMGB1P46-201ENST00000520062 MCMBPQ9BTE3 642 aa7.32□□□□□ -1.24
HMGB1P46-201ENST00000520062 C7orf69Q9H7B7 122 aa7.32□□□□□ -1.24
HMGB1P46-201ENST00000520062 GPATCH2Q9NW75 528 aa7.32□□□□□ -1.24
HMGB1P46-201ENST00000520062 RAXQ9Y2V3 346 aa7.32□□□□□ -1.24
HMGB1P46-201ENST00000520062 C2orf71A6NGG8 1288 aa7.31□□□□□ -1.24
HMGB1P46-201ENST00000520062 STXBP3O00186 592 aa7.31□□□□□ -1.24
HMGB1P46-201ENST00000520062 MEIS1O00470 390 aa7.31□□□□□ -1.24
HMGB1P46-201ENST00000520062 THBDP07204 575 aa7.31□□□□□ -1.24
HMGB1P46-201ENST00000520062 CD3EP07766 207 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms