RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.04□□□□□ -0.16
POLB-208ENST00000520008 ZNF536O15090 1300 aa14.04□□□□□ -0.16
POLB-208ENST00000520008 TSPY3P0CV98 308 aa14.03□□□□□ -0.16
POLB-208ENST00000520008 TSPY8P0CW00 308 aa14.03□□□□□ -0.16
POLB-208ENST00000520008 FDX1P10109 184 aa14.03□□□□□ -0.16
POLB-208ENST00000520008 BMP3P12645 472 aa14.03□□□□□ -0.16
POLB-208ENST00000520008 MX1P20591 662 aa14.03□□□□□ -0.16
POLB-208ENST00000520008 NKX3-2P78367 333 aa14.03□□□□□ -0.16
POLB-208ENST00000520008 PDE4BQ07343 736 aa14.03□□□□□ -0.16
POLB-208ENST00000520008 ACVR2BQ13705 512 aa14.03□□□□□ -0.16
POLB-208ENST00000520008 SLFN13Q68D06 897 aa14.03□□□□□ -0.16
POLB-208ENST00000520008 GMCL1Q96IK5 515 aa14.03□□□□□ -0.16
POLB-208ENST00000520008 FAM161BQ96MY7 647 aa14.03□□□□□ -0.16
POLB-208ENST00000520008 FSD1Q9BTV5 496 aa14.03□□□□□ -0.16
POLB-208ENST00000520008 UPF3AQ9H1J1 476 aaKnown RBP14.03□□□□□ -0.16
POLB-208ENST00000520008 TTYH1Q9H313 450 aaPredicted RBP14.03□□□□□ -0.16
POLB-208ENST00000520008 ABHD16BQ9H3Z7 469 aa14.03□□□□□ -0.16
POLB-208ENST00000520008 STARD7Q9NQZ5 370 aa14.03□□□□□ -0.16
POLB-208ENST00000520008 ZHX1Q9UKY1 873 aaPredicted RBP14.03□□□□□ -0.16
POLB-208ENST00000520008 ELP1O95163 1332 aa14.02□□□□□ -0.17
POLB-208ENST00000520008 CTAGE5O15320 804 aa14.02□□□□□ -0.17
POLB-208ENST00000520008 PLA2G6O60733 806 aa14.02□□□□□ -0.17
POLB-208ENST00000520008 PQBP1O60828 265 aaKnown RBP14.02□□□□□ -0.17
POLB-208ENST00000520008 NOVP48745 357 aa14.02□□□□□ -0.17
POLB-208ENST00000520008 STAT2P52630 851 aa14.02□□□□□ -0.17
POLB-208ENST00000520008 GJA9P57773 515 aa14.02□□□□□ -0.17
POLB-208ENST00000520008 IRX5P78411 483 aaPredicted RBP14.02□□□□□ -0.17
POLB-208ENST00000520008 TFAP4Q01664 338 aa14.02□□□□□ -0.17
POLB-208ENST00000520008 KCNA10Q16322 511 aa14.02□□□□□ -0.17
POLB-208ENST00000520008 ARMCX2Q7L311 632 aa14.02□□□□□ -0.17
POLB-208ENST00000520008 ANKRD35Q8N283 1001 aa14.02□□□□□ -0.17
POLB-208ENST00000520008 FAM133AQ8N9E0 248 aa14.02□□□□□ -0.17
POLB-208ENST00000520008 NUP133Q8WUM0 1156 aa14.02□□□□□ -0.17
POLB-208ENST00000520008 NAPBQ9H115 298 aa14.02□□□□□ -0.17
POLB-208ENST00000520008 IL17RBQ9NRM6 502 aa14.02□□□□□ -0.17
POLB-208ENST00000520008 TBX21Q9UL17 535 aa14.02□□□□□ -0.17
POLB-208ENST00000520008 ASTN1O14525 1302 aa14.01□□□□□ -0.17
POLB-208ENST00000520008 TMEM232C9JQI7 657 aa14.01□□□□□ -0.17
POLB-208ENST00000520008 CDK7P50613 346 aa14.01□□□□□ -0.17
POLB-208ENST00000520008 CCDC144BQ3MJ40 725 aa14.01□□□□□ -0.17
POLB-208ENST00000520008 CCDC144CPQ8IYA2 1237 aa14.01□□□□□ -0.17
POLB-208ENST00000520008 CDX2Q99626 313 aaPredicted RBP14.01□□□□□ -0.17
POLB-208ENST00000520008 SEMA6BQ9H3T3 888 aa14.01□□□□□ -0.17
POLB-208ENST00000520008 ACAD9Q9H845 621 aa14.01□□□□□ -0.17
POLB-208ENST00000520008 A1CFQ9NQ94 594 aaKnown RBP14.01□□□□□ -0.17
POLB-208ENST00000520008 TMEM265A0A087WTH1 108 aa14□□□□□ -0.17
POLB-208ENST00000520008 ASGR1P07306 291 aa14□□□□□ -0.17
POLB-208ENST00000520008 SLC3A2P08195 630 aaKnown RBP14□□□□□ -0.17
POLB-208ENST00000520008 FGRP09769 529 aa14□□□□□ -0.17
POLB-208ENST00000520008 RAG1P15918 1043 aa14□□□□□ -0.17
POLB-208ENST00000520008 CNTN2Q02246 1040 aa14□□□□□ -0.17
POLB-208ENST00000520008 FPGSQ05932 587 aa14□□□□□ -0.17
POLB-208ENST00000520008 CCDC129Q6ZRS4 1044 aa14□□□□□ -0.17
POLB-208ENST00000520008 RASGRP2Q7LDG7 609 aa14□□□□□ -0.17
POLB-208ENST00000520008 FAM160B2Q86V87 743 aa14□□□□□ -0.17
POLB-208ENST00000520008 PHF6Q8IWS0 365 aaKnown RBP eCLIP14□□□□□ -0.17
POLB-208ENST00000520008 PCSK9Q8NBP7 692 aaKnown RBP14□□□□□ -0.17
POLB-208ENST00000520008 STAG1Q8WVM7 1258 aa14□□□□□ -0.17
POLB-208ENST00000520008 HOMER2Q9NSB8 354 aa14□□□□□ -0.17
POLB-208ENST00000520008 TMEM39AQ9NV64 488 aa14□□□□□ -0.17
POLB-208ENST00000520008 ANAPC4Q9UJX5 808 aa14□□□□□ -0.17
POLB-208ENST00000520008 CTDP1Q9Y5B0 961 aaPredicted RBP14□□□□□ -0.17
POLB-208ENST00000520008 MROH7Q68CQ1 1323 aa13.99□□□□□ -0.17
POLB-208ENST00000520008 SOWAHBA6NEL2 793 aa13.99□□□□□ -0.17
POLB-208ENST00000520008 DCDC2CA8MYV0 355 aa13.99□□□□□ -0.17
POLB-208ENST00000520008 NMT2O60551 498 aa13.99□□□□□ -0.17
POLB-208ENST00000520008 C6orf222P0C671 652 aaPredicted RBP13.99□□□□□ -0.17
POLB-208ENST00000520008 SLC1A4P43007 532 aa13.99□□□□□ -0.17
POLB-208ENST00000520008 SLC4A3P48751 1232 aa13.99□□□□□ -0.17
POLB-208ENST00000520008 TKFCQ3LXA3 575 aa13.99□□□□□ -0.17
POLB-208ENST00000520008 PPP4R3BQ5MIZ7 849 aa13.99□□□□□ -0.17
POLB-208ENST00000520008 VPS53Q5VIR6 699 aa13.99□□□□□ -0.17
POLB-208ENST00000520008 CHURC1Q8WUH1 139 aa13.99□□□□□ -0.17
POLB-208ENST00000520008 RNPC3Q96LT9 517 aaKnown RBP13.99□□□□□ -0.17
POLB-208ENST00000520008 AGBL1Q96MI9 1066 aa13.99□□□□□ -0.17
POLB-208ENST00000520008 GLT1D1Q96MS3 346 aa13.99□□□□□ -0.17
POLB-208ENST00000520008 INCENPQ9NQS7 918 aa13.99□□□□□ -0.17
POLB-208ENST00000520008 RNF146Q9NTX7 359 aa13.99□□□□□ -0.17
POLB-208ENST00000520008 U3KPZ7 1027 aaPredicted RBP13.99□□□□□ -0.17
POLB-208ENST00000520008 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.98□□□□□ -0.17
POLB-208ENST00000520008 ORC4O43929 436 aa13.98□□□□□ -0.17
POLB-208ENST00000520008 TIMP1P01033 207 aa13.98□□□□□ -0.17
POLB-208ENST00000520008 MCCP23508 829 aa13.98□□□□□ -0.17
POLB-208ENST00000520008 CTDSPL2Q05D32 466 aa13.98□□□□□ -0.17
POLB-208ENST00000520008 RCSD1Q6JBY9 416 aa13.98□□□□□ -0.17
POLB-208ENST00000520008 KCTD1Q719H9 257 aa13.98□□□□□ -0.17
POLB-208ENST00000520008 FAM126BQ8IXS8 530 aa13.98□□□□□ -0.17
POLB-208ENST00000520008 PRR12Q9ULL5 1215 aa13.98□□□□□ -0.17
POLB-208ENST00000520008 STX8Q9UNK0 236 aa13.98□□□□□ -0.17
POLB-208ENST00000520008 GNEQ9Y223 722 aaKnown RBP13.98□□□□□ -0.17
POLB-208ENST00000520008 PRUNE2Q8WUY3 3088 aa13.97□□□□□ -0.17
POLB-208ENST00000520008 A0A0U1RQG5 324 aaPredicted RBP13.97□□□□□ -0.17
POLB-208ENST00000520008 TSPY2A6NKD2 308 aa13.97□□□□□ -0.17
POLB-208ENST00000520008 ARVCFO00192 962 aa13.97□□□□□ -0.17
POLB-208ENST00000520008 RRP1P56182 461 aaKnown RBP13.97□□□□□ -0.17
POLB-208ENST00000520008 ALX1Q15699 326 aa13.97□□□□□ -0.17
POLB-208ENST00000520008 RASIP1Q5U651 963 aa13.97□□□□□ -0.17
POLB-208ENST00000520008 MFSD5Q6N075 450 aa13.97□□□□□ -0.17
POLB-208ENST00000520008 C16orf59Q7L2K0 433 aa13.97□□□□□ -0.17
POLB-208ENST00000520008 SLC43A3Q8NBI5 491 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms