RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 CTCFLQ8NI51 663 aaPredicted RBP13.81□□□□□ -0.2
HPS4-218ENST00000519774 AGBL1Q96MI9 1066 aa13.81□□□□□ -0.2
HPS4-218ENST00000519774 NUDT12Q9BQG2 462 aa13.81□□□□□ -0.2
HPS4-218ENST00000519774 UPF3BQ9BZI7 483 aaKnown RBP13.81□□□□□ -0.2
HPS4-218ENST00000519774 RANBP17Q9H2T7 1088 aaKnown RBP13.81□□□□□ -0.2
HPS4-218ENST00000519774 MROH8Q9H579 483 aa13.81□□□□□ -0.2
HPS4-218ENST00000519774 VAT1LQ9HCJ6 419 aa13.81□□□□□ -0.2
HPS4-218ENST00000519774 HOMER2Q9NSB8 354 aa13.81□□□□□ -0.2
HPS4-218ENST00000519774 MAD2L2Q9UI95 211 aa13.81□□□□□ -0.2
HPS4-218ENST00000519774 NAP1L2Q9ULW6 460 aaPredicted RBP13.81□□□□□ -0.2
HPS4-218ENST00000519774 HPS5Q9UPZ3 1129 aa13.81□□□□□ -0.2
HPS4-218ENST00000519774 SLC12A7Q9Y666 1083 aa13.81□□□□□ -0.2
HPS4-218ENST00000519774 MYH6P13533 1939 aa13.8□□□□□ -0.2
HPS4-218ENST00000519774 KLF18A0A0U1RQI7 1052 aa13.8□□□□□ -0.2
HPS4-218ENST00000519774 ATP2A1O14983 1001 aa13.8□□□□□ -0.2
HPS4-218ENST00000519774 ALAS1P13196 640 aa13.8□□□□□ -0.2
HPS4-218ENST00000519774 CYP2B6P20813 491 aa13.8□□□□□ -0.2
HPS4-218ENST00000519774 PTPREP23469 700 aa13.8□□□□□ -0.2
HPS4-218ENST00000519774 OAZ1P54368 228 aa13.8□□□□□ -0.2
HPS4-218ENST00000519774 SYNE3Q6ZMZ3 975 aa13.8□□□□□ -0.2
HPS4-218ENST00000519774 SGMS1Q86VZ5 419 aa13.8□□□□□ -0.2
HPS4-218ENST00000519774 ADGRF4Q8IZF3 695 aa13.8□□□□□ -0.2
HPS4-218ENST00000519774 SOCS4Q8WXH5 440 aa13.8□□□□□ -0.2
HPS4-218ENST00000519774 BRF1Q92994 677 aa13.8□□□□□ -0.2
HPS4-218ENST00000519774 CCPG1Q9ULG6 757 aa13.8□□□□□ -0.2
HPS4-218ENST00000519774 RIPK3Q9Y572 518 aa13.8□□□□□ -0.2
HPS4-218ENST00000519774 CYP46A1Q9Y6A2 500 aa13.8□□□□□ -0.2
HPS4-218ENST00000519774 ZNF536O15090 1300 aa13.8□□□□□ -0.2
HPS4-218ENST00000519774 ZNF236Q9UL36 1845 aa13.8□□□□□ -0.2
HPS4-218ENST00000519774 PALM3A6NDB9 673 aaPredicted RBP13.79□□□□□ -0.2
HPS4-218ENST00000519774 SLC15A5A6NIM6 579 aa13.79□□□□□ -0.2
HPS4-218ENST00000519774 ADCY3O60266 1144 aa13.79□□□□□ -0.2
HPS4-218ENST00000519774 ICAM1P05362 532 aa13.79□□□□□ -0.2
HPS4-218ENST00000519774 KIF5BP33176 963 aa13.79□□□□□ -0.2
HPS4-218ENST00000519774 RGS2P41220 211 aa13.79□□□□□ -0.2
HPS4-218ENST00000519774 ANAPC15P60006 121 aa13.79□□□□□ -0.2
HPS4-218ENST00000519774 APOBRQ0VD83 1088 aa13.79□□□□□ -0.2
HPS4-218ENST00000519774 CDC37Q16543 378 aaPredicted RBP13.79□□□□□ -0.2
HPS4-218ENST00000519774 SLC9C1Q4G0N8 1177 aa13.79□□□□□ -0.2
HPS4-218ENST00000519774 MORN1Q5T089 497 aa13.79□□□□□ -0.2
HPS4-218ENST00000519774 APOA5Q6Q788 366 aa13.79□□□□□ -0.2
HPS4-218ENST00000519774 RUFY3Q7L099 469 aa13.79□□□□□ -0.2
HPS4-218ENST00000519774 SH3TC2Q8TF17 1288 aa13.79□□□□□ -0.2
HPS4-218ENST00000519774 ABHD8Q96I13 439 aa13.79□□□□□ -0.2
HPS4-218ENST00000519774 MMP19Q99542 508 aa13.79□□□□□ -0.2
HPS4-218ENST00000519774 TM6SF1Q9BZW5 370 aa13.79□□□□□ -0.2
HPS4-218ENST00000519774 ZSWIM6Q9HCJ5 1215 aa13.79□□□□□ -0.2
HPS4-218ENST00000519774 RNF146Q9NTX7 359 aa13.79□□□□□ -0.2
HPS4-218ENST00000519774 GJD2Q9UKL4 321 aa13.79□□□□□ -0.2
HPS4-218ENST00000519774 BRPF3Q9ULD4 1205 aa13.79□□□□□ -0.2
HPS4-218ENST00000519774 GOLGA8BA8MQT2 603 aa13.78□□□□□ -0.2
HPS4-218ENST00000519774 CALM1P0DP23 149 aa13.78□□□□□ -0.2
HPS4-218ENST00000519774 CALM2P0DP24 149 aa13.78□□□□□ -0.2
HPS4-218ENST00000519774 CALM3P0DP25 149 aa13.78□□□□□ -0.2
HPS4-218ENST00000519774 FCER1AP12319 257 aa13.78□□□□□ -0.2
HPS4-218ENST00000519774 ELNP15502 786 aa13.78□□□□□ -0.2
HPS4-218ENST00000519774 ADORA2AP29274 412 aa13.78□□□□□ -0.2
HPS4-218ENST00000519774 GRK4P32298 578 aa13.78□□□□□ -0.2
HPS4-218ENST00000519774 MAP2K5Q13163 448 aa13.78□□□□□ -0.2
HPS4-218ENST00000519774 IRF5Q13568 498 aa13.78□□□□□ -0.2
HPS4-218ENST00000519774 GRB14Q14449 540 aa13.78□□□□□ -0.2
HPS4-218ENST00000519774 KCTD2Q14681 263 aa13.78□□□□□ -0.2
HPS4-218ENST00000519774 USH1GQ495M9 461 aa13.78□□□□□ -0.2
HPS4-218ENST00000519774 PIBF1Q8WXW3 757 aa13.78□□□□□ -0.2
HPS4-218ENST00000519774 APBA2Q99767 749 aa13.78□□□□□ -0.2
HPS4-218ENST00000519774 JMJD4Q9H9V9 463 aa13.78□□□□□ -0.2
HPS4-218ENST00000519774 BIN2Q9UBW5 565 aaPredicted RBP13.78□□□□□ -0.2
HPS4-218ENST00000519774 ZNFX1Q9P2E3 1918 aaKnown RBP13.78□□□□□ -0.2
HPS4-218ENST00000519774 SMCHD1A6NHR9 2005 aa13.78□□□□□ -0.2
HPS4-218ENST00000519774 GOLGA8AA7E2F4 631 aa13.77□□□□□ -0.21
HPS4-218ENST00000519774 ZBTB43O43298 467 aa13.77□□□□□ -0.21
HPS4-218ENST00000519774 STRNO43815 780 aa13.77□□□□□ -0.21
HPS4-218ENST00000519774 PLEKHA8P1O95397 391 aa13.77□□□□□ -0.21
HPS4-218ENST00000519774 MYCP01106 439 aaPredicted RBP13.77□□□□□ -0.21
HPS4-218ENST00000519774 PGK2P07205 417 aa13.77□□□□□ -0.21
HPS4-218ENST00000519774 SLC35G1Q2M3R5 365 aa13.77□□□□□ -0.21
HPS4-218ENST00000519774 QRICH1Q2TAL8 776 aa13.77□□□□□ -0.21
HPS4-218ENST00000519774 TKFCQ3LXA3 575 aa13.77□□□□□ -0.21
HPS4-218ENST00000519774 NBPF11Q86T75 865 aa13.77□□□□□ -0.21
HPS4-218ENST00000519774 DPP9Q86TI2 863 aa13.77□□□□□ -0.21
HPS4-218ENST00000519774 HOMER1Q86YM7 354 aa13.77□□□□□ -0.21
HPS4-218ENST00000519774 SLAIN1Q8ND83 568 aa13.77□□□□□ -0.21
HPS4-218ENST00000519774 CHST13Q8NET6 341 aa13.77□□□□□ -0.21
HPS4-218ENST00000519774 USP6NLQ92738 828 aa13.77□□□□□ -0.21
HPS4-218ENST00000519774 TRERF1Q96PN7 1200 aa13.77□□□□□ -0.21
HPS4-218ENST00000519774 MAP3K14Q99558 947 aa13.77□□□□□ -0.21
HPS4-218ENST00000519774 ACAD9Q9H845 621 aa13.77□□□□□ -0.21
HPS4-218ENST00000519774 PDRG1Q9NUG6 133 aa13.77□□□□□ -0.21
HPS4-218ENST00000519774 FBXO40Q9UH90 709 aa13.77□□□□□ -0.21
HPS4-218ENST00000519774 BAZ2BQ9UIF8 2168 aaKnown RBP13.77□□□□□ -0.21
HPS4-218ENST00000519774 PLXNA1Q9UIW2 1896 aa13.76□□□□□ -0.21
HPS4-218ENST00000519774 CCL14Q16627 93 aa13.76□□□□□ -0.21
HPS4-218ENST00000519774 RTN1Q16799 776 aa13.76□□□□□ -0.21
HPS4-218ENST00000519774 MUM1L1Q5H9M0 696 aa13.76□□□□□ -0.21
HPS4-218ENST00000519774 NSMFQ6X4W1 530 aa13.76□□□□□ -0.21
HPS4-218ENST00000519774 ABRAQ8N0Z2 381 aa13.76□□□□□ -0.21
HPS4-218ENST00000519774 CMTR1Q8N1G2 835 aaKnown RBP13.76□□□□□ -0.21
HPS4-218ENST00000519774 ANKRD35Q8N283 1001 aa13.76□□□□□ -0.21
HPS4-218ENST00000519774 FANCBQ8NB91 859 aa13.76□□□□□ -0.21
HPS4-218ENST00000519774 NPLOC4Q8TAT6 608 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms