RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 SYNRGQ9UMZ2 1314 aa9.54□□□□□ -0.88
HMGB4-203ENST00000519684 PNMA6FA0A0J9YX94 578 aa9.54□□□□□ -0.88
HMGB4-203ENST00000519684 NPM3O75607 178 aaKnown RBP9.54□□□□□ -0.88
HMGB4-203ENST00000519684 CACNB3P54284 484 aa9.54□□□□□ -0.88
HMGB4-203ENST00000519684 FMR1Q06787 632 aaKnown RBP eCLIP9.54□□□□□ -0.88
HMGB4-203ENST00000519684 ARID5BQ14865 1188 aa9.54□□□□□ -0.88
HMGB4-203ENST00000519684 TPD52L1Q16890 204 aaPredicted RBP9.54□□□□□ -0.88
HMGB4-203ENST00000519684 CERKLQ49MI3 558 aaPredicted RBP9.54□□□□□ -0.88
HMGB4-203ENST00000519684 RRAGBQ5VZM2 374 aa9.54□□□□□ -0.88
HMGB4-203ENST00000519684 PDXDC2PQ6P474 469 aa9.54□□□□□ -0.88
HMGB4-203ENST00000519684 TRMT44Q8IYL2 757 aaKnown RBP9.54□□□□□ -0.88
HMGB4-203ENST00000519684 DISC1Q9NRI5 854 aa9.54□□□□□ -0.88
HMGB4-203ENST00000519684 BIN2Q9UBW5 565 aaPredicted RBP9.54□□□□□ -0.88
HMGB4-203ENST00000519684 SIPA1L1O43166 1804 aa9.53□□□□□ -0.88
HMGB4-203ENST00000519684 UQCRHLA0A096LP55 91 aa9.53□□□□□ -0.88
HMGB4-203ENST00000519684 UQCRHP07919 91 aa9.53□□□□□ -0.88
HMGB4-203ENST00000519684 SF3B2Q13435 895 aaKnown RBP9.53□□□□□ -0.88
HMGB4-203ENST00000519684 JAKMIP3Q5VZ66 844 aa9.53□□□□□ -0.88
HMGB4-203ENST00000519684 KLHL10Q6JEL2 608 aa9.53□□□□□ -0.88
HMGB4-203ENST00000519684 ZFPM1Q8IX07 1006 aa9.53□□□□□ -0.88
HMGB4-203ENST00000519684 C7orf43Q8WVR3 580 aa9.53□□□□□ -0.88
HMGB4-203ENST00000519684 AK8Q96MA6 479 aa9.53□□□□□ -0.88
HMGB4-203ENST00000519684 TMEM60Q9H2L4 133 aa9.53□□□□□ -0.88
HMGB4-203ENST00000519684 C21orf2O43822 256 aa9.53□□□□□ -0.88
HMGB4-203ENST00000519684 RAD21O60216 631 aa9.53□□□□□ -0.88
HMGB4-203ENST00000519684 CASP1P29466 404 aa9.53□□□□□ -0.88
HMGB4-203ENST00000519684 CCZ1BP86790 482 aa9.53□□□□□ -0.88
HMGB4-203ENST00000519684 CCZ1P86791 482 aaPredicted RBP9.53□□□□□ -0.88
HMGB4-203ENST00000519684 KARSQ15046 597 aaKnown RBP9.53□□□□□ -0.88
HMGB4-203ENST00000519684 CCDC93Q567U6 631 aa9.53□□□□□ -0.88
HMGB4-203ENST00000519684 SPATA1Q5VX52 437 aa9.53□□□□□ -0.88
HMGB4-203ENST00000519684 ADGRF4Q8IZF3 695 aa9.53□□□□□ -0.88
HMGB4-203ENST00000519684 TBCKQ8TEA7 893 aa9.53□□□□□ -0.88
HMGB4-203ENST00000519684 DCAF4Q8WV16 495 aa9.53□□□□□ -0.88
HMGB4-203ENST00000519684 STAMQ92783 540 aa9.53□□□□□ -0.88
HMGB4-203ENST00000519684 COA7Q96BR5 231 aa9.53□□□□□ -0.88
HMGB4-203ENST00000519684 CCSER1Q9C0I3 900 aa9.53□□□□□ -0.88
HMGB4-203ENST00000519684 BLZF1Q9H2G9 400 aa9.53□□□□□ -0.88
HMGB4-203ENST00000519684 KANSL2Q9H9L4 492 aa9.53□□□□□ -0.88
HMGB4-203ENST00000519684 MAGEF1Q9HAY2 307 aa9.53□□□□□ -0.88
HMGB4-203ENST00000519684 TMOD2Q9NZR1 351 aa9.53□□□□□ -0.88
HMGB4-203ENST00000519684 FAM198AQ9UFP1 575 aa9.53□□□□□ -0.88
HMGB4-203ENST00000519684 PCDHAC2Q9Y5I4 1007 aa9.53□□□□□ -0.88
HMGB4-203ENST00000519684 PSME4Q14997 1843 aa9.52□□□□□ -0.89
HMGB4-203ENST00000519684 DDTLA6NHG4 134 aaPredicted RBP9.52□□□□□ -0.89
HMGB4-203ENST00000519684 RPN1P04843 607 aaKnown RBP9.52□□□□□ -0.89
HMGB4-203ENST00000519684 CABP7Q86V35 215 aa9.52□□□□□ -0.89
HMGB4-203ENST00000519684 VSTM4Q8IW00 320 aa9.52□□□□□ -0.89
HMGB4-203ENST00000519684 RTKN2Q8IZC4 609 aa9.52□□□□□ -0.89
HMGB4-203ENST00000519684 DPF2Q92785 391 aa9.52□□□□□ -0.89
HMGB4-203ENST00000519684 CUL5Q93034 780 aa9.52□□□□□ -0.89
HMGB4-203ENST00000519684 CUEDC2Q9H467 287 aa9.52□□□□□ -0.89
HMGB4-203ENST00000519684 JMJD4Q9H9V9 463 aa9.52□□□□□ -0.89
HMGB4-203ENST00000519684 TMEM260Q9NX78 707 aa9.52□□□□□ -0.89
HMGB4-203ENST00000519684 NYAP2Q9P242 653 aa9.52□□□□□ -0.89
HMGB4-203ENST00000519684 ZBTB5O15062 677 aa9.51□□□□□ -0.89
HMGB4-203ENST00000519684 ENTPD3O75355 529 aa9.51□□□□□ -0.89
HMGB4-203ENST00000519684 MYL1P05976 194 aa9.51□□□□□ -0.89
HMGB4-203ENST00000519684 EEF2P13639 858 aaKnown RBP9.51□□□□□ -0.89
HMGB4-203ENST00000519684 ZNF18P17022 549 aa9.51□□□□□ -0.89
HMGB4-203ENST00000519684 CDC25AP30304 524 aa9.51□□□□□ -0.89
HMGB4-203ENST00000519684 CUL4BQ13620 913 aa9.51□□□□□ -0.89
HMGB4-203ENST00000519684 TMEM266Q2M3C6 531 aa9.51□□□□□ -0.89
HMGB4-203ENST00000519684 HSP90AA4PQ58FG1 418 aa9.51□□□□□ -0.89
HMGB4-203ENST00000519684 ARMCX5Q6P1M9 558 aa9.51□□□□□ -0.89
HMGB4-203ENST00000519684 TMEM179Q6ZVK1 233 aa9.51□□□□□ -0.89
HMGB4-203ENST00000519684 KCTD1Q719H9 257 aa9.51□□□□□ -0.89
HMGB4-203ENST00000519684 TTLL6Q8N841 843 aa9.51□□□□□ -0.89
HMGB4-203ENST00000519684 CCDC112Q8NEF3 446 aa9.51□□□□□ -0.89
HMGB4-203ENST00000519684 CCDC47Q96A33 483 aaKnown RBP9.51□□□□□ -0.89
HMGB4-203ENST00000519684 C16orf45Q96MC5 204 aaPredicted RBP9.51□□□□□ -0.89
HMGB4-203ENST00000519684 TDRD3Q9H7E2 651 aaKnown RBP9.51□□□□□ -0.89
HMGB4-203ENST00000519684 DNAJC18Q9H819 358 aa9.51□□□□□ -0.89
HMGB4-203ENST00000519684 RIC8AQ9NPQ8 531 aa9.51□□□□□ -0.89
HMGB4-203ENST00000519684 CTNND2Q9UQB3 1225 aa9.51□□□□□ -0.89
HMGB4-203ENST00000519684 COL2A1P02458 1487 aaPredicted RBP9.51□□□□□ -0.89
HMGB4-203ENST00000519684 FAM196BA6NMK8 535 aa9.51□□□□□ -0.89
HMGB4-203ENST00000519684 PP2D1A8MPX8 630 aa9.51□□□□□ -0.89
HMGB4-203ENST00000519684 SLC1A4P43007 532 aa9.51□□□□□ -0.89
HMGB4-203ENST00000519684 BAG6P46379 1132 aa9.51□□□□□ -0.89
HMGB4-203ENST00000519684 MRPL12P52815 198 aaKnown RBP9.51□□□□□ -0.89
HMGB4-203ENST00000519684 STX17P56962 302 aa9.51□□□□□ -0.89
HMGB4-203ENST00000519684 ICA1Q05084 483 aa9.51□□□□□ -0.89
HMGB4-203ENST00000519684 CALCRLQ16602 461 aa9.51□□□□□ -0.89
HMGB4-203ENST00000519684 ABCB5Q2M3G0 1257 aa9.51□□□□□ -0.89
HMGB4-203ENST00000519684 ZNF658Q5TYW1 1059 aaPredicted RBP9.51□□□□□ -0.89
HMGB4-203ENST00000519684 SLFN13Q68D06 897 aa9.51□□□□□ -0.89
HMGB4-203ENST00000519684 TTBK2Q6IQ55 1244 aa9.51□□□□□ -0.89
HMGB4-203ENST00000519684 POTEAQ6S8J7 498 aa9.51□□□□□ -0.89
HMGB4-203ENST00000519684 RAB34Q9BZG1 259 aa9.51□□□□□ -0.89
HMGB4-203ENST00000519684 GLT8D2Q9H1C3 349 aa9.51□□□□□ -0.89
HMGB4-203ENST00000519684 HDAC9Q9UKV0 1011 aa9.51□□□□□ -0.89
HMGB4-203ENST00000519684 ARFGEF1Q9Y6D6 1849 aa9.51□□□□□ -0.89
HMGB4-203ENST00000519684 ATRNL1Q5VV63 1379 aa9.5□□□□□ -0.89
HMGB4-203ENST00000519684 PPP1R3GB7ZBB8 358 aa9.5□□□□□ -0.89
HMGB4-203ENST00000519684 USP17L10C9JJH3 530 aa9.5□□□□□ -0.89
HMGB4-203ENST00000519684 TNNT1P13805 278 aa9.5□□□□□ -0.89
HMGB4-203ENST00000519684 CD44P16070 742 aaKnown RBP9.5□□□□□ -0.89
HMGB4-203ENST00000519684 SLC16A2P36021 539 aa9.5□□□□□ -0.89
HMGB4-203ENST00000519684 TNNI2P48788 182 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms