RNA–Protein interactions for RNA: ENST00000519643.5

SH3PXD2B-203, Transcript of SH3 and PX domains 2B, humanhuman

TSL 1 (best) BASIC

Gene SH3PXD2B, Length 1,394 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2B-203ENST00000519643 VPS54Q9P1Q0 977 aa17.4■□□□□ 0.38
SH3PXD2B-203ENST00000519643 CCL15-CCL14A0A0B4J2E2 113 aa17.39■□□□□ 0.37
SH3PXD2B-203ENST00000519643 A0A1W2PRG0 241 aa17.39■□□□□ 0.37
SH3PXD2B-203ENST00000519643 FIBPO43427 364 aa17.39■□□□□ 0.37
SH3PXD2B-203ENST00000519643 ASNSP08243 561 aa17.39■□□□□ 0.37
SH3PXD2B-203ENST00000519643 U2AF2P26368 475 aaKnown RBP eCLIP17.39■□□□□ 0.37
SH3PXD2B-203ENST00000519643 TAF1CQ15572 869 aaPredicted RBP17.39■□□□□ 0.37
SH3PXD2B-203ENST00000519643 CCL15Q16663 113 aa17.39■□□□□ 0.37
SH3PXD2B-203ENST00000519643 CSPP1Q1MSJ5 1256 aa17.39■□□□□ 0.37
SH3PXD2B-203ENST00000519643 SLC9C1Q4G0N8 1177 aa17.39■□□□□ 0.37
SH3PXD2B-203ENST00000519643 ATL3Q6DD88 541 aa17.39■□□□□ 0.37
SH3PXD2B-203ENST00000519643 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.39■□□□□ 0.37
SH3PXD2B-203ENST00000519643 ZNF396Q96N95 335 aaPredicted RBP17.39■□□□□ 0.37
SH3PXD2B-203ENST00000519643 PHF20Q9BVI0 1012 aa17.39■□□□□ 0.37
SH3PXD2B-203ENST00000519643 ZNF341Q9BYN7 854 aa17.39■□□□□ 0.37
SH3PXD2B-203ENST00000519643 UBA5Q9GZZ9 404 aa17.39■□□□□ 0.37
SH3PXD2B-203ENST00000519643 CPVLQ9H3G5 476 aa17.39■□□□□ 0.37
SH3PXD2B-203ENST00000519643 RIOX1Q9H6W3 641 aa17.39■□□□□ 0.37
SH3PXD2B-203ENST00000519643 F5H6K3 240 aa17.38■□□□□ 0.37
SH3PXD2B-203ENST00000519643 TRAK2O60296 914 aa17.38■□□□□ 0.37
SH3PXD2B-203ENST00000519643 CTNND1O60716 968 aaKnown RBP17.38■□□□□ 0.37
SH3PXD2B-203ENST00000519643 NDUFB10O96000 172 aa17.38■□□□□ 0.37
SH3PXD2B-203ENST00000519643 KLRC3Q07444 240 aa17.38■□□□□ 0.37
SH3PXD2B-203ENST00000519643 GNL2Q13823 731 aaKnown RBP17.38■□□□□ 0.37
SH3PXD2B-203ENST00000519643 SKOR2Q2VWA4 1001 aaPredicted RBP17.38■□□□□ 0.37
SH3PXD2B-203ENST00000519643 DIS3L2Q8IYB7 885 aaKnown RBP17.38■□□□□ 0.37
SH3PXD2B-203ENST00000519643 ACER1Q8TDN7 264 aa17.38■□□□□ 0.37
SH3PXD2B-203ENST00000519643 RRP36Q96EU6 259 aaKnown RBP17.38■□□□□ 0.37
SH3PXD2B-203ENST00000519643 GMCL1Q96IK5 515 aa17.38■□□□□ 0.37
SH3PXD2B-203ENST00000519643 ARHGAP39Q9C0H5 1083 aa17.38■□□□□ 0.37
SH3PXD2B-203ENST00000519643 ZFYVE28Q9HCC9 887 aa17.38■□□□□ 0.37
SH3PXD2B-203ENST00000519643 SH3GLB2Q9NR46 395 aa17.38■□□□□ 0.37
SH3PXD2B-203ENST00000519643 TFIP11Q9UBB9 837 aaKnown RBP17.38■□□□□ 0.37
SH3PXD2B-203ENST00000519643 ZNF112Q9UJU3 913 aa17.38■□□□□ 0.37
SH3PXD2B-203ENST00000519643 TMX2Q9Y320 296 aa17.38■□□□□ 0.37
SH3PXD2B-203ENST00000519643 RANBP2P49792 3224 aaKnown RBP17.37■□□□□ 0.37
SH3PXD2B-203ENST00000519643 DOCK1Q14185 1865 aa17.37■□□□□ 0.37
SH3PXD2B-203ENST00000519643 H0YGN5 161 aa17.37■□□□□ 0.37
SH3PXD2B-203ENST00000519643 SLC1A4P43007 532 aa17.37■□□□□ 0.37
SH3PXD2B-203ENST00000519643 GTF2A2P52657 109 aa17.37■□□□□ 0.37
SH3PXD2B-203ENST00000519643 MAP3K9P80192 1104 aa17.37■□□□□ 0.37
SH3PXD2B-203ENST00000519643 MYSM1Q5VVJ2 828 aa17.37■□□□□ 0.37
SH3PXD2B-203ENST00000519643 TTBK2Q6IQ55 1244 aa17.37■□□□□ 0.37
SH3PXD2B-203ENST00000519643 KCTD1Q719H9 257 aa17.37■□□□□ 0.37
SH3PXD2B-203ENST00000519643 FAM177A1Q8N128 213 aaPredicted RBP17.37■□□□□ 0.37
SH3PXD2B-203ENST00000519643 SCAND2PQ9GZW5 306 aaPredicted RBP17.37■□□□□ 0.37
SH3PXD2B-203ENST00000519643 FOXP1Q9H334 677 aaPredicted RBP17.37■□□□□ 0.37
SH3PXD2B-203ENST00000519643 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.37■□□□□ 0.37
SH3PXD2B-203ENST00000519643 CFAP45Q9UL16 551 aa17.37■□□□□ 0.37
SH3PXD2B-203ENST00000519643 BTBD18B2RXH4 712 aa17.36■□□□□ 0.37
SH3PXD2B-203ENST00000519643 RAD21O60216 631 aa17.36■□□□□ 0.37
SH3PXD2B-203ENST00000519643 MYCP01106 439 aaPredicted RBP17.36■□□□□ 0.37
SH3PXD2B-203ENST00000519643 WWC2Q6AWC2 1192 aa17.36■□□□□ 0.37
SH3PXD2B-203ENST00000519643 SH3TC2Q8TF17 1288 aa17.36■□□□□ 0.37
SH3PXD2B-203ENST00000519643 GPKOWQ92917 476 aaPredicted RBP eCLIP17.36■□□□□ 0.37
SH3PXD2B-203ENST00000519643 OTUD5Q96G74 571 aa17.36■□□□□ 0.37
SH3PXD2B-203ENST00000519643 PIGSQ96S52 555 aa17.36■□□□□ 0.37
SH3PXD2B-203ENST00000519643 SH2D4AQ9H788 454 aa17.36■□□□□ 0.37
SH3PXD2B-203ENST00000519643 VAT1LQ9HCJ6 419 aa17.36■□□□□ 0.37
SH3PXD2B-203ENST00000519643 SEC63Q9UGP8 760 aaKnown RBP17.36■□□□□ 0.37
SH3PXD2B-203ENST00000519643 ELP1O95163 1332 aa17.35■□□□□ 0.37
SH3PXD2B-203ENST00000519643 SPDYE5A6NIY4 337 aa17.35■□□□□ 0.37
SH3PXD2B-203ENST00000519643 STXBP3O00186 592 aa17.35■□□□□ 0.37
SH3PXD2B-203ENST00000519643 KRT2P35908 639 aa17.35■□□□□ 0.37
SH3PXD2B-203ENST00000519643 NPY5RQ15761 445 aa17.35■□□□□ 0.37
SH3PXD2B-203ENST00000519643 NOSTRINQ8IVI9 506 aa17.35■□□□□ 0.37
SH3PXD2B-203ENST00000519643 ADGRF4Q8IZF3 695 aa17.35■□□□□ 0.37
SH3PXD2B-203ENST00000519643 LEO1Q8WVC0 666 aaPredicted RBP17.35■□□□□ 0.37
SH3PXD2B-203ENST00000519643 SPATA32Q96LK8 384 aa17.35■□□□□ 0.37
SH3PXD2B-203ENST00000519643 USP28Q96RU2 1077 aa17.35■□□□□ 0.37
SH3PXD2B-203ENST00000519643 JMJD4Q9H9V9 463 aa17.35■□□□□ 0.37
SH3PXD2B-203ENST00000519643 BRMS1Q9HCU9 246 aa17.35■□□□□ 0.37
SH3PXD2B-203ENST00000519643 GOPCQ9HD26 462 aa17.35■□□□□ 0.37
SH3PXD2B-203ENST00000519643 BARHL2Q9NY43 387 aa17.35■□□□□ 0.37
SH3PXD2B-203ENST00000519643 ISY1Q9ULR0 285 aaKnown RBP17.35■□□□□ 0.37
SH3PXD2B-203ENST00000519643 SNCAIPQ9Y6H5 919 aa17.35■□□□□ 0.37
SH3PXD2B-203ENST00000519643 GADD45BO75293 160 aaPredicted RBP17.34■□□□□ 0.37
SH3PXD2B-203ENST00000519643 BMP3P12645 472 aa17.34■□□□□ 0.37
SH3PXD2B-203ENST00000519643 CALML3P27482 149 aa17.34■□□□□ 0.37
SH3PXD2B-203ENST00000519643 INPP5BP32019 993 aa17.34■□□□□ 0.37
SH3PXD2B-203ENST00000519643 NLRP5P59047 1200 aa17.34■□□□□ 0.37
SH3PXD2B-203ENST00000519643 ARHGEF6Q15052 776 aa17.34■□□□□ 0.37
SH3PXD2B-203ENST00000519643 HEATR3Q7Z4Q2 680 aa17.34■□□□□ 0.37
SH3PXD2B-203ENST00000519643 HOMER1Q86YM7 354 aa17.34■□□□□ 0.37
SH3PXD2B-203ENST00000519643 CCDC148Q8NFR7 591 aa17.34■□□□□ 0.37
SH3PXD2B-203ENST00000519643 OXER1Q8TDS5 423 aa17.34■□□□□ 0.37
SH3PXD2B-203ENST00000519643 MTMR8Q96EF0 704 aa17.34■□□□□ 0.37
SH3PXD2B-203ENST00000519643 VCPKMTQ9H867 229 aa17.34■□□□□ 0.37
SH3PXD2B-203ENST00000519643 DDX49Q9Y6V7 483 aaKnown RBP17.34■□□□□ 0.37
SH3PXD2B-203ENST00000519643 hCG_1984214I3L0E3 225 aa17.33■□□□□ 0.36
SH3PXD2B-203ENST00000519643 TLR2O60603 784 aa17.33■□□□□ 0.36
SH3PXD2B-203ENST00000519643 SLC16A2P36021 539 aa17.33■□□□□ 0.36
SH3PXD2B-203ENST00000519643 LACTBP83111 547 aaPredicted RBP17.33■□□□□ 0.36
SH3PXD2B-203ENST00000519643 NR5A1Q13285 461 aa17.33■□□□□ 0.36
SH3PXD2B-203ENST00000519643 KLHL40Q2TBA0 621 aa17.33■□□□□ 0.36
SH3PXD2B-203ENST00000519643 TYW1BQ6NUM6 668 aa17.33■□□□□ 0.36
SH3PXD2B-203ENST00000519643 CCDC84Q86UT8 332 aaPredicted RBP17.33■□□□□ 0.36
SH3PXD2B-203ENST00000519643 SCYL3Q8IZE3 742 aa17.33■□□□□ 0.36
SH3PXD2B-203ENST00000519643 ZNF713Q8N859 430 aaPredicted RBP17.33■□□□□ 0.36
SH3PXD2B-203ENST00000519643 WRNIP1Q96S55 665 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms