RNA–Protein interactions for RNA: ENST00000519436.1

ARFGEF1-206, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARFGEF1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-206ENST00000519436 SYNGAP1Q96PV0 1343 aa25.05■■□□□ 1.6
ARFGEF1-206ENST00000519436 SNAP25P60880 206 aa25.04■■□□□ 1.6
ARFGEF1-206ENST00000519436 IKQ13123 557 aaPredicted RBP25.04■■□□□ 1.6
ARFGEF1-206ENST00000519436 LRRC41Q15345 812 aa25.04■■□□□ 1.6
ARFGEF1-206ENST00000519436 ANKRD35Q8N283 1001 aa25.04■■□□□ 1.6
ARFGEF1-206ENST00000519436 NEDD4P46934 1319 aa25.04■■□□□ 1.6
ARFGEF1-206ENST00000519436 SYN1P17600 705 aa25.03■■□□□ 1.6
ARFGEF1-206ENST00000519436 TKFCQ3LXA3 575 aa25.03■■□□□ 1.6
ARFGEF1-206ENST00000519436 FAM133AQ8N9E0 248 aa25.03■■□□□ 1.6
ARFGEF1-206ENST00000519436 ACAD9Q9H845 621 aa25.03■■□□□ 1.6
ARFGEF1-206ENST00000519436 MTMR7Q9Y216 660 aa25.03■■□□□ 1.6
ARFGEF1-206ENST00000519436 SNHG28P0DPA3 235 aa25.02■■□□□ 1.6
ARFGEF1-206ENST00000519436 PDHBP11177 359 aa25.02■■□□□ 1.6
ARFGEF1-206ENST00000519436 BMP8BP34820 402 aa25.02■■□□□ 1.6
ARFGEF1-206ENST00000519436 NT5C2P49902 561 aa25.02■■□□□ 1.6
ARFGEF1-206ENST00000519436 ESR2Q92731 530 aa25.02■■□□□ 1.6
ARFGEF1-206ENST00000519436 TRERF1Q96PN7 1200 aa25.02■■□□□ 1.6
ARFGEF1-206ENST00000519436 RANBP17Q9H2T7 1088 aaKnown RBP25.02■■□□□ 1.6
ARFGEF1-206ENST00000519436 HOMER2Q9NSB8 354 aa25.02■■□□□ 1.6
ARFGEF1-206ENST00000519436 RNF146Q9NTX7 359 aa25.02■■□□□ 1.6
ARFGEF1-206ENST00000519436 CNPY2Q9Y2B0 182 aa25.02■■□□□ 1.6
ARFGEF1-206ENST00000519436 FRMPD3Q5JV73 1810 aa25.02■■□□□ 1.6
ARFGEF1-206ENST00000519436 A0A1W2PPC1 479 aa25.01■■□□□ 1.59
ARFGEF1-206ENST00000519436 RARBP10826 455 aa25.01■■□□□ 1.59
ARFGEF1-206ENST00000519436 SLC16A2P36021 539 aa25.01■■□□□ 1.59
ARFGEF1-206ENST00000519436 CNTN2Q02246 1040 aa25.01■■□□□ 1.59
ARFGEF1-206ENST00000519436 CCDC96Q2M329 555 aa25.01■■□□□ 1.59
ARFGEF1-206ENST00000519436 A1CFQ9NQ94 594 aaKnown RBP25.01■■□□□ 1.59
ARFGEF1-206ENST00000519436 SMCHD1A6NHR9 2005 aa25.01■■□□□ 1.59
ARFGEF1-206ENST00000519436 AKR1A1P14550 325 aa25■■□□□ 1.59
ARFGEF1-206ENST00000519436 ATN1P54259 1190 aaPredicted RBP25■■□□□ 1.59
ARFGEF1-206ENST00000519436 CCDC174Q6PII3 467 aa25■■□□□ 1.59
ARFGEF1-206ENST00000519436 SLC39A5Q6ZMH5 540 aa25■■□□□ 1.59
ARFGEF1-206ENST00000519436 DGKHQ86XP1 1220 aa25■■□□□ 1.59
ARFGEF1-206ENST00000519436 ANKS1AQ92625 1134 aa25■■□□□ 1.59
ARFGEF1-206ENST00000519436 XPNPEP3Q9NQH7 507 aa25■■□□□ 1.59
ARFGEF1-206ENST00000519436 KBTBD13C9JR72 458 aa24.99■■□□□ 1.59
ARFGEF1-206ENST00000519436 ICAM1P05362 532 aa24.99■■□□□ 1.59
ARFGEF1-206ENST00000519436 ALAS1P13196 640 aa24.99■■□□□ 1.59
ARFGEF1-206ENST00000519436 ADCYAP1R1P41586 468 aa24.99■■□□□ 1.59
ARFGEF1-206ENST00000519436 SNX17Q15036 470 aa24.99■■□□□ 1.59
ARFGEF1-206ENST00000519436 MUM1L1Q5H9M0 696 aa24.99■■□□□ 1.59
ARFGEF1-206ENST00000519436 SYDE2Q5VT97 1194 aa24.99■■□□□ 1.59
ARFGEF1-206ENST00000519436 FRMPD2Q68DX3 1309 aaPredicted RBP24.99■■□□□ 1.59
ARFGEF1-206ENST00000519436 ZKSCAN3Q9BRR0 538 aa24.99■■□□□ 1.59
ARFGEF1-206ENST00000519436 KATNBL1Q9H079 304 aa24.99■■□□□ 1.59
ARFGEF1-206ENST00000519436 GPCPD1Q9NPB8 672 aa24.99■■□□□ 1.59
ARFGEF1-206ENST00000519436 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.99■■□□□ 1.59
ARFGEF1-206ENST00000519436 PCDH10Q9P2E7 1040 aa24.99■■□□□ 1.59
ARFGEF1-206ENST00000519436 CTNNA3Q9UI47 895 aa24.99■■□□□ 1.59
ARFGEF1-206ENST00000519436 DNAH12Q6ZR08 3092 aa24.98■■□□□ 1.59
ARFGEF1-206ENST00000519436 SOWAHBA6NEL2 793 aa24.98■■□□□ 1.59
ARFGEF1-206ENST00000519436 POTEB2H3BUK9 544 aa24.98■■□□□ 1.59
ARFGEF1-206ENST00000519436 KDM4AO75164 1064 aa24.98■■□□□ 1.59
ARFGEF1-206ENST00000519436 ADAMTS4O75173 837 aa24.98■■□□□ 1.59
ARFGEF1-206ENST00000519436 PGK1P00558 417 aa24.98■■□□□ 1.59
ARFGEF1-206ENST00000519436 MAGEA10P43363 369 aaPredicted RBP24.98■■□□□ 1.59
ARFGEF1-206ENST00000519436 ZNF543Q08ER8 600 aa24.98■■□□□ 1.59
ARFGEF1-206ENST00000519436 ACVR2BQ13705 512 aa24.98■■□□□ 1.59
ARFGEF1-206ENST00000519436 LENG1Q96BZ8 264 aaPredicted RBP24.98■■□□□ 1.59
ARFGEF1-206ENST00000519436 ZSWIM5Q9P217 1185 aa24.98■■□□□ 1.59
ARFGEF1-206ENST00000519436 FAM184BQ9ULE4 1060 aa24.98■■□□□ 1.59
ARFGEF1-206ENST00000519436 PHF24Q9UPV7 400 aa24.98■■□□□ 1.59
ARFGEF1-206ENST00000519436 PLXNA1Q9UIW2 1896 aa24.98■■□□□ 1.59
ARFGEF1-206ENST00000519436 CHMLP26374 656 aa24.97■■□□□ 1.59
ARFGEF1-206ENST00000519436 RTP1P59025 263 aa24.97■■□□□ 1.59
ARFGEF1-206ENST00000519436 IMMTQ16891 758 aaKnown RBP24.97■■□□□ 1.59
ARFGEF1-206ENST00000519436 ARMCX2Q7L311 632 aa24.97■■□□□ 1.59
ARFGEF1-206ENST00000519436 CCDC144CPQ8IYA2 1237 aa24.97■■□□□ 1.59
ARFGEF1-206ENST00000519436 ABHD16BQ9H3Z7 469 aa24.97■■□□□ 1.59
ARFGEF1-206ENST00000519436 CCPG1Q9ULG6 757 aa24.97■■□□□ 1.59
ARFGEF1-206ENST00000519436 SZT2Q5T011 3432 aa24.96■■□□□ 1.59
ARFGEF1-206ENST00000519436 ASTN1O14525 1302 aa24.96■■□□□ 1.59
ARFGEF1-206ENST00000519436 B4E1Z4 1266 aa24.96■■□□□ 1.59
ARFGEF1-206ENST00000519436 MYCNP04198 464 aaPredicted RBP24.96■■□□□ 1.59
ARFGEF1-206ENST00000519436 C1orf53Q5VUE5 145 aa24.96■■□□□ 1.59
ARFGEF1-206ENST00000519436 RNF180Q86T96 592 aa24.96■■□□□ 1.59
ARFGEF1-206ENST00000519436 KLHDC9Q8NEP7 349 aa24.96■■□□□ 1.59
ARFGEF1-206ENST00000519436 CYP39A1Q9NYL5 469 aa24.96■■□□□ 1.59
ARFGEF1-206ENST00000519436 ZHX1Q9UKY1 873 aaPredicted RBP24.96■■□□□ 1.59
ARFGEF1-206ENST00000519436 LAMA3Q16787 3333 aa24.96■■□□□ 1.59
ARFGEF1-206ENST00000519436 ADCY6O43306 1168 aa24.95■■□□□ 1.58
ARFGEF1-206ENST00000519436 CCDC178Q5BJE1 867 aa24.95■■□□□ 1.58
ARFGEF1-206ENST00000519436 CCSAPQ6IQ19 270 aaPredicted RBP24.95■■□□□ 1.58
ARFGEF1-206ENST00000519436 IQCA1Q86XH1 822 aa24.95■■□□□ 1.58
ARFGEF1-206ENST00000519436 FERMT2Q96AC1 680 aa24.95■■□□□ 1.58
ARFGEF1-206ENST00000519436 ZSCAN10Q96SZ4 725 aaPredicted RBP24.95■■□□□ 1.58
ARFGEF1-206ENST00000519436 RAD50Q92878 1312 aa24.94■■□□□ 1.58
ARFGEF1-206ENST00000519436 DUSP11O75319 330 aaKnown RBP24.94■■□□□ 1.58
ARFGEF1-206ENST00000519436 CCDC144BQ3MJ40 725 aa24.94■■□□□ 1.58
ARFGEF1-206ENST00000519436 PTH1RQ03431 593 aa24.93■■□□□ 1.58
ARFGEF1-206ENST00000519436 ENAHQ8N8S7 591 aaPredicted RBP24.93■■□□□ 1.58
ARFGEF1-206ENST00000519436 CLEC4DQ8WXI8 215 aa24.93■■□□□ 1.58
ARFGEF1-206ENST00000519436 TSEN34Q9BSV6 310 aaKnown RBP24.93■■□□□ 1.58
ARFGEF1-206ENST00000519436 KRT23Q9C075 422 aa24.93■■□□□ 1.58
ARFGEF1-206ENST00000519436 SYNRGQ9UMZ2 1314 aa24.92■■□□□ 1.58
ARFGEF1-206ENST00000519436 GPATCH4Q5T3I0 446 aaKnown RBP24.92■■□□□ 1.58
ARFGEF1-206ENST00000519436 PNMA1Q8ND90 353 aa24.92■■□□□ 1.58
ARFGEF1-206ENST00000519436 PURBQ96QR8 312 aaKnown RBP24.92■■□□□ 1.58
ARFGEF1-206ENST00000519436 ATP11BQ9Y2G3 1177 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms