RNA–Protein interactions for RNA: ENST00000519381.1

VPS37A-204, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 4

Gene VPS37A, Length 575 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-204ENST00000519381 ACAD9Q9H845 621 aa18.84■□□□□ 0.61
VPS37A-204ENST00000519381 STX8Q9UNK0 236 aa18.84■□□□□ 0.61
VPS37A-204ENST00000519381 ADAMTS4O75173 837 aa18.83■□□□□ 0.6
VPS37A-204ENST00000519381 DUSP11O75319 330 aaKnown RBP18.83■□□□□ 0.6
VPS37A-204ENST00000519381 MAMDC4Q6UXC1 1216 aa18.83■□□□□ 0.6
VPS37A-204ENST00000519381 CHMP4CQ96CF2 233 aa18.83■□□□□ 0.6
VPS37A-204ENST00000519381 SEC62Q99442 399 aaKnown RBP18.83■□□□□ 0.6
VPS37A-204ENST00000519381 DNAJC25-GNG10A0A024R161 153 aa18.82■□□□□ 0.6
VPS37A-204ENST00000519381 SNAI1O95863 264 aaPredicted RBP18.82■□□□□ 0.6
VPS37A-204ENST00000519381 SMAD3P84022 425 aaKnown RBP18.82■□□□□ 0.6
VPS37A-204ENST00000519381 KCNA10Q16322 511 aa18.82■□□□□ 0.6
VPS37A-204ENST00000519381 ZMYM1Q5SVZ6 1142 aa18.82■□□□□ 0.6
VPS37A-204ENST00000519381 CCDC174Q6PII3 467 aa18.82■□□□□ 0.6
VPS37A-204ENST00000519381 ARMCX2Q7L311 632 aa18.82■□□□□ 0.6
VPS37A-204ENST00000519381 PI4K2BQ8TCG2 481 aa18.82■□□□□ 0.6
VPS37A-204ENST00000519381 GUCD1Q96NT3 240 aa18.82■□□□□ 0.6
VPS37A-204ENST00000519381 TOMM22Q9NS69 142 aa18.82■□□□□ 0.6
VPS37A-204ENST00000519381 MTMR7Q9Y216 660 aa18.82■□□□□ 0.6
VPS37A-204ENST00000519381 KIAA0355O15063 1070 aa18.81■□□□□ 0.6
VPS37A-204ENST00000519381 CCDC144BQ3MJ40 725 aa18.81■□□□□ 0.6
VPS37A-204ENST00000519381 GMCL1Q96IK5 515 aa18.81■□□□□ 0.6
VPS37A-204ENST00000519381 RNF146Q9NTX7 359 aa18.81■□□□□ 0.6
VPS37A-204ENST00000519381 LAMA2P24043 3122 aaKnown RBP18.8■□□□□ 0.6
VPS37A-204ENST00000519381 TLR3O15455 904 aaKnown RBP18.8■□□□□ 0.6
VPS37A-204ENST00000519381 RANBP6O60518 1105 aaKnown RBP18.8■□□□□ 0.6
VPS37A-204ENST00000519381 ALAS1P13196 640 aa18.8■□□□□ 0.6
VPS37A-204ENST00000519381 MCCP23508 829 aa18.8■□□□□ 0.6
VPS37A-204ENST00000519381 CCDC96Q2M329 555 aa18.8■□□□□ 0.6
VPS37A-204ENST00000519381 TKFCQ3LXA3 575 aa18.8■□□□□ 0.6
VPS37A-204ENST00000519381 GNASQ5JWF2 1037 aa18.8■□□□□ 0.6
VPS37A-204ENST00000519381 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.8■□□□□ 0.6
VPS37A-204ENST00000519381 CCDC144CPQ8IYA2 1237 aa18.8■□□□□ 0.6
VPS37A-204ENST00000519381 STAG1Q8WVM7 1258 aa18.8■□□□□ 0.6
VPS37A-204ENST00000519381 TOX2Q96NM4 488 aa18.8■□□□□ 0.6
VPS37A-204ENST00000519381 ELP1O95163 1332 aa18.79■□□□□ 0.6
VPS37A-204ENST00000519381 MCM3APO60318 1980 aa18.79■□□□□ 0.6
VPS37A-204ENST00000519381 A0A0U1RQG5 324 aaPredicted RBP18.79■□□□□ 0.6
VPS37A-204ENST00000519381 ASB14A6NK59 587 aa18.79■□□□□ 0.6
VPS37A-204ENST00000519381 ASGR1P07306 291 aa18.79■□□□□ 0.6
VPS37A-204ENST00000519381 CST5P28325 142 aaPredicted RBP18.79■□□□□ 0.6
VPS37A-204ENST00000519381 CTDSPL2Q05D32 466 aa18.79■□□□□ 0.6
VPS37A-204ENST00000519381 ANKRD45Q5TZF3 282 aa18.79■□□□□ 0.6
VPS37A-204ENST00000519381 CCDC129Q6ZRS4 1044 aa18.79■□□□□ 0.6
VPS37A-204ENST00000519381 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.79■□□□□ 0.6
VPS37A-204ENST00000519381 ANKRD33Q7Z3H0 272 aa18.79■□□□□ 0.6
VPS37A-204ENST00000519381 KLHDC9Q8NEP7 349 aa18.79■□□□□ 0.6
VPS37A-204ENST00000519381 OTUD7AQ8TE49 926 aaPredicted RBP18.79■□□□□ 0.6
VPS37A-204ENST00000519381 PCDHB15Q9Y5E8 787 aa18.79■□□□□ 0.6
VPS37A-204ENST00000519381 CNTN2Q02246 1040 aa18.78■□□□□ 0.6
VPS37A-204ENST00000519381 FAAP100Q0VG06 881 aa18.78■□□□□ 0.6
VPS37A-204ENST00000519381 KCTD1Q719H9 257 aa18.78■□□□□ 0.6
VPS37A-204ENST00000519381 AGBL1Q96MI9 1066 aa18.78■□□□□ 0.6
VPS37A-204ENST00000519381 TRERF1Q96PN7 1200 aa18.78■□□□□ 0.6
VPS37A-204ENST00000519381 CDX2Q99626 313 aaPredicted RBP18.78■□□□□ 0.6
VPS37A-204ENST00000519381 A0A0C4DFX4 3053 aa18.77■□□□□ 0.6
VPS37A-204ENST00000519381 MYADML2A6NDP7 307 aa18.77■□□□□ 0.6
VPS37A-204ENST00000519381 ZEB2O60315 1214 aa18.77■□□□□ 0.6
VPS37A-204ENST00000519381 FOSL2P15408 326 aa18.77■□□□□ 0.6
VPS37A-204ENST00000519381 GJA9P57773 515 aa18.77■□□□□ 0.6
VPS37A-204ENST00000519381 TNFAIP2Q03169 654 aa18.77■□□□□ 0.6
VPS37A-204ENST00000519381 PPIGQ13427 754 aaKnown RBP eCLIP18.77■□□□□ 0.66e-8■□□□□ 9.1
VPS37A-204ENST00000519381 RRP12Q5JTH9 1297 aaKnown RBP18.77■□□□□ 0.6
VPS37A-204ENST00000519381 MAFAQ8NHW3 353 aaPredicted RBP18.77■□□□□ 0.6
VPS37A-204ENST00000519381 EVI5LQ96CN4 794 aa18.77■□□□□ 0.6
VPS37A-204ENST00000519381 AP5M1Q9H0R1 490 aa18.77■□□□□ 0.6
VPS37A-204ENST00000519381 SEMA6BQ9H3T3 888 aa18.77■□□□□ 0.6
VPS37A-204ENST00000519381 A1CFQ9NQ94 594 aaKnown RBP18.77■□□□□ 0.6
VPS37A-204ENST00000519381 CCPG1Q9ULG6 757 aa18.77■□□□□ 0.6
VPS37A-204ENST00000519381 TMEM265A0A087WTH1 108 aa18.76■□□□□ 0.59
VPS37A-204ENST00000519381 TIMP1P01033 207 aa18.76■□□□□ 0.59
VPS37A-204ENST00000519381 ITGB8P26012 769 aa18.76■□□□□ 0.59
VPS37A-204ENST00000519381 RCSD1Q6JBY9 416 aa18.76■□□□□ 0.59
VPS37A-204ENST00000519381 NSMFQ6X4W1 530 aa18.76■□□□□ 0.59
VPS37A-204ENST00000519381 TMEM199Q8N511 208 aa18.76■□□□□ 0.59
VPS37A-204ENST00000519381 UPF3AQ9H1J1 476 aaKnown RBP18.76■□□□□ 0.59
VPS37A-204ENST00000519381 ARVCFO00192 962 aa18.75■□□□□ 0.59
VPS37A-204ENST00000519381 RRP1P56182 461 aaKnown RBP18.75■□□□□ 0.59
VPS37A-204ENST00000519381 TLK2Q86UE8 772 aa18.75■□□□□ 0.59
VPS37A-204ENST00000519381 FAM133AQ8N9E0 248 aa18.75■□□□□ 0.59
VPS37A-204ENST00000519381 DCAF4Q8WV16 495 aa18.75■□□□□ 0.59
VPS37A-204ENST00000519381 MYLIPQ8WY64 445 aa18.75■□□□□ 0.59
VPS37A-204ENST00000519381 FGD4Q96M96 766 aa18.75■□□□□ 0.59
VPS37A-204ENST00000519381 PPP1R12CQ9BZL4 782 aa18.75■□□□□ 0.59
VPS37A-204ENST00000519381 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.75■□□□□ 0.59
VPS37A-204ENST00000519381 CUL9Q8IWT3 2517 aa18.74■□□□□ 0.59
VPS37A-204ENST00000519381 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.74■□□□□ 0.59
VPS37A-204ENST00000519381 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.74■□□□□ 0.59
VPS37A-204ENST00000519381 NMT2O60551 498 aa18.74■□□□□ 0.59
VPS37A-204ENST00000519381 PLA2G6O60733 806 aa18.74■□□□□ 0.59
VPS37A-204ENST00000519381 EPHB4P54760 987 aa18.74■□□□□ 0.59
VPS37A-204ENST00000519381 SNAP25P60880 206 aa18.74■□□□□ 0.59
VPS37A-204ENST00000519381 CCSAPQ6IQ19 270 aaPredicted RBP18.74■□□□□ 0.59
VPS37A-204ENST00000519381 MFSD5Q6N075 450 aa18.74■□□□□ 0.59
VPS37A-204ENST00000519381 MTIF3Q9H2K0 278 aaKnown RBP18.74■□□□□ 0.59
VPS37A-204ENST00000519381 HELLSQ9NRZ9 838 aa18.74■□□□□ 0.59
VPS37A-204ENST00000519381 PRR12Q9ULL5 1215 aa18.74■□□□□ 0.59
VPS37A-204ENST00000519381 ADCY6O43306 1168 aa18.73■□□□□ 0.59
VPS37A-204ENST00000519381 CABYRO75952 493 aa18.73■□□□□ 0.59
VPS37A-204ENST00000519381 DNAJB2P25686 324 aa18.73■□□□□ 0.59
VPS37A-204ENST00000519381 IRX5P78411 483 aaPredicted RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms