RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 ZNF536O15090 1300 aa10.44□□□□□ -0.74
TRIM35-202ENST00000519219 UMODL1Q5DID0 1318 aa10.44□□□□□ -0.74
TRIM35-202ENST00000519219 DCDC2CA8MYV0 355 aa10.44□□□□□ -0.74
TRIM35-202ENST00000519219 ATP2A1O14983 1001 aa10.44□□□□□ -0.74
TRIM35-202ENST00000519219 FOXP2O15409 715 aa10.44□□□□□ -0.74
TRIM35-202ENST00000519219 RNF113AO15541 343 aaKnown RBP10.44□□□□□ -0.74
TRIM35-202ENST00000519219 DUSP11O75319 330 aaKnown RBP10.44□□□□□ -0.74
TRIM35-202ENST00000519219 TIMP1P01033 207 aa10.44□□□□□ -0.74
TRIM35-202ENST00000519219 ACRP10323 421 aa10.44□□□□□ -0.74
TRIM35-202ENST00000519219 CSF2RAP15509 400 aa10.44□□□□□ -0.74
TRIM35-202ENST00000519219 CST5P28325 142 aaPredicted RBP10.44□□□□□ -0.74
TRIM35-202ENST00000519219 TMEM240Q5SV17 173 aa10.44□□□□□ -0.74
TRIM35-202ENST00000519219 ZSCAN25Q6NSZ9 544 aa10.44□□□□□ -0.74
TRIM35-202ENST00000519219 CCDC144CPQ8IYA2 1237 aa10.44□□□□□ -0.74
TRIM35-202ENST00000519219 MSL3Q8N5Y2 521 aaKnown RBP10.44□□□□□ -0.74
TRIM35-202ENST00000519219 AGBL1Q96MI9 1066 aa10.44□□□□□ -0.74
TRIM35-202ENST00000519219 TOX2Q96NM4 488 aa10.44□□□□□ -0.74
TRIM35-202ENST00000519219 PPP1R12CQ9BZL4 782 aa10.44□□□□□ -0.74
TRIM35-202ENST00000519219 INCENPQ9NQS7 918 aa10.44□□□□□ -0.74
TRIM35-202ENST00000519219 MTMR4Q9NYA4 1195 aa10.44□□□□□ -0.74
TRIM35-202ENST00000519219 RCAN3Q9UKA8 241 aa10.44□□□□□ -0.74
TRIM35-202ENST00000519219 REV3LO60673 3130 aa10.43□□□□□ -0.74
TRIM35-202ENST00000519219 TCF20Q9UGU0 1960 aaKnown RBP10.43□□□□□ -0.74
TRIM35-202ENST00000519219 PLIN4Q96Q06 1357 aa10.43□□□□□ -0.74
TRIM35-202ENST00000519219 SOWAHBA6NEL2 793 aa10.43□□□□□ -0.74
TRIM35-202ENST00000519219 MOXD2PA6NHM9 499 aa10.43□□□□□ -0.74
TRIM35-202ENST00000519219 RBAK-RBAKDNI3L0D1 243 aa10.43□□□□□ -0.74
TRIM35-202ENST00000519219 ZBED4O75132 1171 aa10.43□□□□□ -0.74
TRIM35-202ENST00000519219 CYP2C18P33260 490 aa10.43□□□□□ -0.74
TRIM35-202ENST00000519219 TDO2P48775 406 aa10.43□□□□□ -0.74
TRIM35-202ENST00000519219 GJA9P57773 515 aa10.43□□□□□ -0.74
TRIM35-202ENST00000519219 SLFN13Q68D06 897 aa10.43□□□□□ -0.74
TRIM35-202ENST00000519219 GIMAP6Q6P9H5 292 aa10.43□□□□□ -0.74
TRIM35-202ENST00000519219 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.43□□□□□ -0.74
TRIM35-202ENST00000519219 ZNF467Q7Z7K2 595 aaPredicted RBP10.43□□□□□ -0.74
TRIM35-202ENST00000519219 FAM126BQ8IXS8 530 aa10.43□□□□□ -0.74
TRIM35-202ENST00000519219 ANKRD35Q8N283 1001 aa10.43□□□□□ -0.74
TRIM35-202ENST00000519219 GMCL1P1Q8NEA9 526 aa10.43□□□□□ -0.74
TRIM35-202ENST00000519219 NUP133Q8WUM0 1156 aa10.43□□□□□ -0.74
TRIM35-202ENST00000519219 PURBQ96QR8 312 aaKnown RBP10.43□□□□□ -0.74
TRIM35-202ENST00000519219 PBX4Q9BYU1 374 aa10.43□□□□□ -0.74
TRIM35-202ENST00000519219 ZNF576Q9H609 170 aa10.43□□□□□ -0.74
TRIM35-202ENST00000519219 A1CFQ9NQ94 594 aaKnown RBP10.43□□□□□ -0.74
TRIM35-202ENST00000519219 GRIN2DO15399 1336 aa10.42□□□□□ -0.74
TRIM35-202ENST00000519219 ELP1O95163 1332 aa10.42□□□□□ -0.74
TRIM35-202ENST00000519219 TMEM265A0A087WTH1 108 aa10.42□□□□□ -0.74
TRIM35-202ENST00000519219 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.42□□□□□ -0.74
TRIM35-202ENST00000519219 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.42□□□□□ -0.74
TRIM35-202ENST00000519219 TMEM232C9JQI7 657 aa10.42□□□□□ -0.74
TRIM35-202ENST00000519219 ARVCFO00192 962 aa10.42□□□□□ -0.74
TRIM35-202ENST00000519219 NMT2O60551 498 aa10.42□□□□□ -0.74
TRIM35-202ENST00000519219 APPP05067 770 aa10.42□□□□□ -0.74
TRIM35-202ENST00000519219 MUM1L1Q5H9M0 696 aa10.42□□□□□ -0.74
TRIM35-202ENST00000519219 GNASQ5JWF2 1037 aa10.42□□□□□ -0.74
TRIM35-202ENST00000519219 RASIP1Q5U651 963 aa10.42□□□□□ -0.74
TRIM35-202ENST00000519219 MFSD5Q6N075 450 aa10.42□□□□□ -0.74
TRIM35-202ENST00000519219 CXCL17Q6UXB2 119 aa10.42□□□□□ -0.74
TRIM35-202ENST00000519219 CCDC129Q6ZRS4 1044 aa10.42□□□□□ -0.74
TRIM35-202ENST00000519219 ZNF365Q70YC5 407 aa10.42□□□□□ -0.74
TRIM35-202ENST00000519219 IFNL3Q8IZI9 196 aa10.42□□□□□ -0.74
TRIM35-202ENST00000519219 ZNF444Q8N0Y2 327 aaPredicted RBP10.42□□□□□ -0.74
TRIM35-202ENST00000519219 FAM133AQ8N9E0 248 aa10.42□□□□□ -0.74
TRIM35-202ENST00000519219 NEDD1Q8NHV4 660 aa10.42□□□□□ -0.74
TRIM35-202ENST00000519219 MKL1Q969V6 931 aa10.42□□□□□ -0.74
TRIM35-202ENST00000519219 VTI1AQ96AJ9 217 aa10.42□□□□□ -0.74
TRIM35-202ENST00000519219 TIFAQ96CG3 184 aa10.42□□□□□ -0.74
TRIM35-202ENST00000519219 GLT1D1Q96MS3 346 aa10.42□□□□□ -0.74
TRIM35-202ENST00000519219 ABHD16BQ9H3Z7 469 aa10.42□□□□□ -0.74
TRIM35-202ENST00000519219 PRDM12Q9H4Q4 367 aa10.42□□□□□ -0.74
TRIM35-202ENST00000519219 DCTPP1Q9H773 170 aa10.42□□□□□ -0.74
TRIM35-202ENST00000519219 PDGFCQ9NRA1 345 aa10.42□□□□□ -0.74
TRIM35-202ENST00000519219 RNF146Q9NTX7 359 aa10.42□□□□□ -0.74
TRIM35-202ENST00000519219 CXXC1Q9P0U4 656 aaPredicted RBP10.42□□□□□ -0.74
TRIM35-202ENST00000519219 FEM1BQ9UK73 627 aa10.42□□□□□ -0.74
TRIM35-202ENST00000519219 ISY1Q9ULR0 285 aaKnown RBP10.42□□□□□ -0.74
TRIM35-202ENST00000519219 CTDP1Q9Y5B0 961 aaPredicted RBP10.42□□□□□ -0.74
TRIM35-202ENST00000519219 A0A0U1RQG5 324 aaPredicted RBP10.41□□□□□ -0.74
TRIM35-202ENST00000519219 TTLL1O95922 423 aa10.41□□□□□ -0.74
TRIM35-202ENST00000519219 CD4P01730 458 aa10.41□□□□□ -0.74
TRIM35-202ENST00000519219 BMP3P12645 472 aa10.41□□□□□ -0.74
TRIM35-202ENST00000519219 MCCP23508 829 aa10.41□□□□□ -0.74
TRIM35-202ENST00000519219 TFAP4Q01664 338 aa10.41□□□□□ -0.74
TRIM35-202ENST00000519219 CTDSPL2Q05D32 466 aa10.41□□□□□ -0.74
TRIM35-202ENST00000519219 PPIGQ13427 754 aaKnown RBP eCLIP10.41□□□□□ -0.74
TRIM35-202ENST00000519219 ADGRE1Q14246 886 aa10.41□□□□□ -0.74
TRIM35-202ENST00000519219 CCDC174Q6PII3 467 aa10.41□□□□□ -0.74
TRIM35-202ENST00000519219 KCTD1Q719H9 257 aa10.41□□□□□ -0.74
TRIM35-202ENST00000519219 EEPD1Q7L9B9 569 aa10.41□□□□□ -0.74
TRIM35-202ENST00000519219 CHST13Q8NET6 341 aa10.41□□□□□ -0.74
TRIM35-202ENST00000519219 TET1Q8NFU7 2136 aa10.41□□□□□ -0.74
TRIM35-202ENST00000519219 PI4K2BQ8TCG2 481 aa10.41□□□□□ -0.74
TRIM35-202ENST00000519219 PPM1EQ8WY54 764 aa10.41□□□□□ -0.74
TRIM35-202ENST00000519219 VWCEQ96DN2 955 aa10.41□□□□□ -0.74
TRIM35-202ENST00000519219 MTMR7Q9Y216 660 aa10.41□□□□□ -0.74
TRIM35-202ENST00000519219 GNEQ9Y223 722 aaKnown RBP10.41□□□□□ -0.74
TRIM35-202ENST00000519219 NCOR1O75376 2440 aa10.41□□□□□ -0.74
TRIM35-202ENST00000519219 TRIP12Q14669 1992 aaPredicted RBP10.4□□□□□ -0.74
TRIM35-202ENST00000519219 PATL2C9JE40 543 aaKnown RBP10.4□□□□□ -0.74
TRIM35-202ENST00000519219 TSPY3P0CV98 308 aa10.4□□□□□ -0.74
TRIM35-202ENST00000519219 TSPY8P0CW00 308 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms