RNA–Protein interactions for RNA: ENST00000518847.1

TRAPPC2-206, Transcript of trafficking protein particle complex 2, humanhuman

TSL 4

Gene TRAPPC2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-206ENST00000518847 CHST13Q8NET6 341 aa13.69□□□□□ -0.22
TRAPPC2-206ENST00000518847 NKX2-3Q8TAU0 364 aa13.69□□□□□ -0.22
TRAPPC2-206ENST00000518847 BICD2Q8TD16 824 aa13.69□□□□□ -0.22
TRAPPC2-206ENST00000518847 MPHOSPH6Q99547 160 aaKnown RBP13.69□□□□□ -0.22
TRAPPC2-206ENST00000518847 NUP88Q99567 741 aaPredicted RBP13.69□□□□□ -0.22
TRAPPC2-206ENST00000518847 P2RX7Q99572 595 aaKnown RBP13.69□□□□□ -0.22
TRAPPC2-206ENST00000518847 PTPN18Q99952 460 aa13.69□□□□□ -0.22
TRAPPC2-206ENST00000518847 MYL10Q9BUA6 226 aa13.69□□□□□ -0.22
TRAPPC2-206ENST00000518847 SENP2Q9HC62 589 aa13.69□□□□□ -0.22
TRAPPC2-206ENST00000518847 SLC5A4Q9NY91 659 aa13.69□□□□□ -0.22
TRAPPC2-206ENST00000518847 MORF4L1Q9UBU8 362 aa13.69□□□□□ -0.22
TRAPPC2-206ENST00000518847 B4DLN1 442 aa13.68□□□□□ -0.22
TRAPPC2-206ENST00000518847 IGF2BP3O00425 579 aaKnown RBP eCLIP13.68□□□□□ -0.22
TRAPPC2-206ENST00000518847 STRNO43815 780 aa13.68□□□□□ -0.22
TRAPPC2-206ENST00000518847 AOC2O75106 756 aa13.68□□□□□ -0.22
TRAPPC2-206ENST00000518847 FMNL1O95466 1100 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC2-206ENST00000518847 GNA11P29992 359 aa13.68□□□□□ -0.22
TRAPPC2-206ENST00000518847 ADD1P35611 737 aaKnown RBP13.68□□□□□ -0.22
TRAPPC2-206ENST00000518847 STAT3P40763 770 aa13.68□□□□□ -0.22
TRAPPC2-206ENST00000518847 MRPL12P52815 198 aaKnown RBP13.68□□□□□ -0.22
TRAPPC2-206ENST00000518847 CDC37Q16543 378 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC2-206ENST00000518847 NOL8Q76FK4 1167 aaKnown RBP13.68□□□□□ -0.22
TRAPPC2-206ENST00000518847 STAG2Q8N3U4 1231 aa13.68□□□□□ -0.22
TRAPPC2-206ENST00000518847 MTMR8Q96EF0 704 aa13.68□□□□□ -0.22
TRAPPC2-206ENST00000518847 BRMS1Q9HCU9 246 aa13.68□□□□□ -0.22
TRAPPC2-206ENST00000518847 IVNS1ABPQ9Y6Y0 642 aa13.68□□□□□ -0.22
TRAPPC2-206ENST00000518847 RXRAP19793 462 aa13.67□□□□□ -0.22
TRAPPC2-206ENST00000518847 CALML3P27482 149 aa13.67□□□□□ -0.22
TRAPPC2-206ENST00000518847 HOXD10P28358 340 aa13.67□□□□□ -0.22
TRAPPC2-206ENST00000518847 ERVK-9P63128 1117 aa13.67□□□□□ -0.22
TRAPPC2-206ENST00000518847 ERVK-24P63145 666 aa13.67□□□□□ -0.22
TRAPPC2-206ENST00000518847 PFKFB3Q16875 520 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC2-206ENST00000518847 KIAA1755Q5JYT7 1200 aa13.67□□□□□ -0.22
TRAPPC2-206ENST00000518847 RIOX2Q8IUF8 465 aa13.67□□□□□ -0.22
TRAPPC2-206ENST00000518847 ABRAQ8N0Z2 381 aa13.67□□□□□ -0.22
TRAPPC2-206ENST00000518847 SRBD1Q8N5C6 995 aaKnown RBP13.67□□□□□ -0.22
TRAPPC2-206ENST00000518847 SLC26A6Q9BXS9 759 aa13.67□□□□□ -0.22
TRAPPC2-206ENST00000518847 UBA5Q9GZZ9 404 aa13.67□□□□□ -0.22
TRAPPC2-206ENST00000518847 SPATC1LQ9H0A9 340 aa13.67□□□□□ -0.22
TRAPPC2-206ENST00000518847 JMJD4Q9H9V9 463 aa13.67□□□□□ -0.22
TRAPPC2-206ENST00000518847 VAT1LQ9HCJ6 419 aa13.67□□□□□ -0.22
TRAPPC2-206ENST00000518847 CCPG1Q9ULG6 757 aa13.67□□□□□ -0.22
TRAPPC2-206ENST00000518847 SMC3Q9UQE7 1217 aa13.67□□□□□ -0.22
TRAPPC2-206ENST00000518847 V9GY48 417 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC2-206ENST00000518847 PFASO15067 1338 aa13.66□□□□□ -0.22
TRAPPC2-206ENST00000518847 SCG2P13521 617 aa13.66□□□□□ -0.22
TRAPPC2-206ENST00000518847 CDC27P30260 824 aa13.66□□□□□ -0.22
TRAPPC2-206ENST00000518847 SLC16A2P36021 539 aa13.66□□□□□ -0.22
TRAPPC2-206ENST00000518847 CUL4AQ13619 759 aa13.66□□□□□ -0.22
TRAPPC2-206ENST00000518847 PLS1Q14651 629 aa13.66□□□□□ -0.22
TRAPPC2-206ENST00000518847 SAFBQ15424 915 aaKnown RBP eCLIP13.66□□□□□ -0.22
TRAPPC2-206ENST00000518847 NTRK3Q16288 839 aa13.66□□□□□ -0.22
TRAPPC2-206ENST00000518847 TTBK2Q6IQ55 1244 aa13.66□□□□□ -0.22
TRAPPC2-206ENST00000518847 SAMD1Q6SPF0 538 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC2-206ENST00000518847 HOMER1Q86YM7 354 aa13.66□□□□□ -0.22
TRAPPC2-206ENST00000518847 CCDC83Q8IWF9 413 aa13.66□□□□□ -0.22
TRAPPC2-206ENST00000518847 CUL5Q93034 780 aa13.66□□□□□ -0.22
TRAPPC2-206ENST00000518847 ATG4CQ96DT6 458 aa13.66□□□□□ -0.22
TRAPPC2-206ENST00000518847 ACAD9Q9H845 621 aa13.66□□□□□ -0.22
TRAPPC2-206ENST00000518847 EHMT1Q9H9B1 1298 aa13.66□□□□□ -0.22
TRAPPC2-206ENST00000518847 FBXO28Q9NVF7 368 aa13.66□□□□□ -0.22
TRAPPC2-206ENST00000518847 RNF186Q9NXI6 227 aa13.66□□□□□ -0.22
TRAPPC2-206ENST00000518847 ORC3Q9UBD5 711 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC2-206ENST00000518847 PCDHA1Q9Y5I3 950 aa13.66□□□□□ -0.22
TRAPPC2-206ENST00000518847 CNTNAP5Q8WYK1 1306 aa13.65□□□□□ -0.22
TRAPPC2-206ENST00000518847 LOC102724159A0A0B4J2E5 919 aa13.65□□□□□ -0.22
TRAPPC2-206ENST00000518847 PLEKHA8P1O95397 391 aa13.65□□□□□ -0.22
TRAPPC2-206ENST00000518847 CYP2C8P10632 490 aa13.65□□□□□ -0.22
TRAPPC2-206ENST00000518847 PRMT2P55345 433 aa13.65□□□□□ -0.22
TRAPPC2-206ENST00000518847 FCGRTP55899 365 aa13.65□□□□□ -0.22
TRAPPC2-206ENST00000518847 CRHR2Q13324 411 aa13.65□□□□□ -0.22
TRAPPC2-206ENST00000518847 COL9A3Q14050 684 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC2-206ENST00000518847 PWP2Q15269 919 aaKnown RBP13.65□□□□□ -0.22
TRAPPC2-206ENST00000518847 QRICH1Q2TAL8 776 aa13.65□□□□□ -0.22
TRAPPC2-206ENST00000518847 SNRNP48Q6IEG0 339 aaKnown RBP13.65□□□□□ -0.22
TRAPPC2-206ENST00000518847 C17orf99Q6UX52 265 aa13.65□□□□□ -0.22
TRAPPC2-206ENST00000518847 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.65□□□□□ -0.22
TRAPPC2-206ENST00000518847 CCDC82Q8N4S0 544 aa13.65□□□□□ -0.22
TRAPPC2-206ENST00000518847 ANKRD13CQ8N6S4 541 aa13.65□□□□□ -0.22
TRAPPC2-206ENST00000518847 COA7Q96BR5 231 aa13.65□□□□□ -0.22
TRAPPC2-206ENST00000518847 ERO1AQ96HE7 468 aa13.65□□□□□ -0.22
TRAPPC2-206ENST00000518847 PAGR1Q9BTK6 254 aa13.65□□□□□ -0.22
TRAPPC2-206ENST00000518847 C6orf50Q9HD87 102 aa13.65□□□□□ -0.22
TRAPPC2-206ENST00000518847 FAM217BQ9NTX9 383 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC2-206ENST00000518847 BARHL2Q9NY43 387 aa13.65□□□□□ -0.22
TRAPPC2-206ENST00000518847 ESYT2A0FGR8 921 aa13.64□□□□□ -0.23
TRAPPC2-206ENST00000518847 PTPDC1A2A3K4 754 aa13.64□□□□□ -0.23
TRAPPC2-206ENST00000518847 TRPA1O75762 1119 aa13.64□□□□□ -0.23
TRAPPC2-206ENST00000518847 BCRP11274 1271 aa13.64□□□□□ -0.23
TRAPPC2-206ENST00000518847 FCER1AP12319 257 aa13.64□□□□□ -0.23
TRAPPC2-206ENST00000518847 NAPAP54920 295 aa13.64□□□□□ -0.23
TRAPPC2-206ENST00000518847 SP3Q02447 781 aa13.64□□□□□ -0.23
TRAPPC2-206ENST00000518847 FUT2Q10981 343 aa13.64□□□□□ -0.23
TRAPPC2-206ENST00000518847 DGKZQ13574 1117 aa13.64□□□□□ -0.23
TRAPPC2-206ENST00000518847 KCTD2Q14681 263 aa13.64□□□□□ -0.23
TRAPPC2-206ENST00000518847 TMEM132BQ14DG7 1078 aa13.64□□□□□ -0.23
TRAPPC2-206ENST00000518847 CCDC174Q6PII3 467 aa13.64□□□□□ -0.23
TRAPPC2-206ENST00000518847 HEATR3Q7Z4Q2 680 aa13.64□□□□□ -0.23
TRAPPC2-206ENST00000518847 NBPF11Q86T75 865 aa13.64□□□□□ -0.23
TRAPPC2-206ENST00000518847 CPXCR1Q8N123 301 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms