RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 RPAP1Q9BWH6 1393 aaPredicted RBP7.34□□□□□ -1.23
MRPS28-203ENST00000518371 MANSC4A6NHS7 340 aaPredicted RBP7.34□□□□□ -1.23
MRPS28-203ENST00000518371 SPATA31C2B4DYI2 1134 aa7.34□□□□□ -1.23
MRPS28-203ENST00000518371 FOXN1O15353 648 aa7.34□□□□□ -1.23
MRPS28-203ENST00000518371 CA12O43570 354 aa7.34□□□□□ -1.23
MRPS28-203ENST00000518371 TRPA1O75762 1119 aa7.34□□□□□ -1.23
MRPS28-203ENST00000518371 GNRH1P01148 92 aa7.34□□□□□ -1.23
MRPS28-203ENST00000518371 HLA-DOAP06340 250 aa7.34□□□□□ -1.23
MRPS28-203ENST00000518371 ZBTB48P10074 688 aaPredicted RBP7.34□□□□□ -1.23
MRPS28-203ENST00000518371 INPP5BP32019 993 aa7.34□□□□□ -1.23
MRPS28-203ENST00000518371 ADD2P35612 726 aa7.34□□□□□ -1.23
MRPS28-203ENST00000518371 INHBEP58166 350 aa7.34□□□□□ -1.23
MRPS28-203ENST00000518371 VAC14Q08AM6 782 aa7.34□□□□□ -1.23
MRPS28-203ENST00000518371 SREBF2Q12772 1141 aa7.34□□□□□ -1.23
MRPS28-203ENST00000518371 VGLL4Q14135 290 aa7.34□□□□□ -1.23
MRPS28-203ENST00000518371 UBE3CQ15386 1083 aa7.34□□□□□ -1.23
MRPS28-203ENST00000518371 RIPOR1Q6ZS17 1223 aa7.34□□□□□ -1.23
MRPS28-203ENST00000518371 CHD1LQ86WJ1 897 aa7.34□□□□□ -1.23
MRPS28-203ENST00000518371 FOXP4Q8IVH2 680 aaPredicted RBP7.34□□□□□ -1.23
MRPS28-203ENST00000518371 CRACR2BQ8N4Y2 399 aaPredicted RBP7.34□□□□□ -1.23
MRPS28-203ENST00000518371 OPTNQ96CV9 577 aa7.34□□□□□ -1.23
MRPS28-203ENST00000518371 GAS2L1Q99501 681 aaPredicted RBP7.34□□□□□ -1.23
MRPS28-203ENST00000518371 CRNKL1Q9BZJ0 848 aaKnown RBP7.34□□□□□ -1.23
MRPS28-203ENST00000518371 DHX36Q9H2U1 1008 aaKnown RBP7.34□□□□□ -1.23
MRPS28-203ENST00000518371 PI4KBQ9UBF8 816 aa7.34□□□□□ -1.23
MRPS28-203ENST00000518371 SAP30BPQ9UHR5 308 aaKnown RBP7.34□□□□□ -1.23
MRPS28-203ENST00000518371 ZNF112Q9UJU3 913 aa7.34□□□□□ -1.23
MRPS28-203ENST00000518371 PALD1Q9ULE6 856 aa7.34□□□□□ -1.23
MRPS28-203ENST00000518371 MKL2Q9ULH7 1088 aa7.34□□□□□ -1.23
MRPS28-203ENST00000518371 DYRK1BQ9Y463 629 aa7.34□□□□□ -1.23
MRPS28-203ENST00000518371 SSC5DA1L4H1 1573 aa7.33□□□□□ -1.24
MRPS28-203ENST00000518371 PAPPA2Q9BXP8 1791 aa7.33□□□□□ -1.24
MRPS28-203ENST00000518371 TCRBV5S4A2TA0A5A2 114 aa7.33□□□□□ -1.24
MRPS28-203ENST00000518371 RNF113AO15541 343 aaKnown RBP7.33□□□□□ -1.24
MRPS28-203ENST00000518371 POLR3DP05423 398 aaPredicted RBP7.33□□□□□ -1.24
MRPS28-203ENST00000518371 THBS1P07996 1170 aa7.33□□□□□ -1.24
MRPS28-203ENST00000518371 ZFYP08048 801 aaPredicted RBP7.33□□□□□ -1.24
MRPS28-203ENST00000518371 TM4SF4P48230 202 aa7.33□□□□□ -1.24
MRPS28-203ENST00000518371 LBX1P52954 281 aa7.33□□□□□ -1.24
MRPS28-203ENST00000518371 PDE1AP54750 535 aa7.33□□□□□ -1.24
MRPS28-203ENST00000518371 NUCB1Q02818 461 aa7.33□□□□□ -1.24
MRPS28-203ENST00000518371 SLFNL1Q499Z3 407 aa7.33□□□□□ -1.24
MRPS28-203ENST00000518371 WDR44Q5JSH3 913 aa7.33□□□□□ -1.24
MRPS28-203ENST00000518371 OTUD7BQ6GQQ9 843 aa7.33□□□□□ -1.24
MRPS28-203ENST00000518371 TTC6Q86TZ1 520 aa7.33□□□□□ -1.24
MRPS28-203ENST00000518371 ERO1BQ86YB8 467 aa7.33□□□□□ -1.24
MRPS28-203ENST00000518371 LCORLQ8N3X6 602 aa7.33□□□□□ -1.24
MRPS28-203ENST00000518371 KBTBD3Q8NAB2 608 aa7.33□□□□□ -1.24
MRPS28-203ENST00000518371 PI4K2BQ8TCG2 481 aa7.33□□□□□ -1.24
MRPS28-203ENST00000518371 RIOK1Q9BRS2 568 aaKnown RBP7.33□□□□□ -1.24
MRPS28-203ENST00000518371 FSD1Q9BTV5 496 aa7.33□□□□□ -1.24
MRPS28-203ENST00000518371 ARMT1Q9H993 441 aa7.33□□□□□ -1.24
MRPS28-203ENST00000518371 PICK1Q9NRD5 415 aa7.33□□□□□ -1.24
MRPS28-203ENST00000518371 RNF186Q9NXI6 227 aa7.33□□□□□ -1.24
MRPS28-203ENST00000518371 STAP2Q9UGK3 403 aa7.33□□□□□ -1.24
MRPS28-203ENST00000518371 SNCAIPQ9Y6H5 919 aa7.33□□□□□ -1.24
MRPS28-203ENST00000518371 MYH13Q9UKX3 1938 aa7.33□□□□□ -1.24
MRPS28-203ENST00000518371 FLT1P17948 1338 aa7.32□□□□□ -1.24
MRPS28-203ENST00000518371 KRTAP4-8A0A0G2JLE6 195 aa7.32□□□□□ -1.24
MRPS28-203ENST00000518371 FAM196BA6NMK8 535 aa7.32□□□□□ -1.24
MRPS28-203ENST00000518371 PRKAB2O43741 272 aa7.32□□□□□ -1.24
MRPS28-203ENST00000518371 CTNND1O60716 968 aaKnown RBP7.32□□□□□ -1.24
MRPS28-203ENST00000518371 MBD4O95243 580 aa7.32□□□□□ -1.24
MRPS28-203ENST00000518371 NEFLP07196 543 aa7.32□□□□□ -1.24
MRPS28-203ENST00000518371 CENPBP07199 599 aaPredicted RBP7.32□□□□□ -1.24
MRPS28-203ENST00000518371 GTF2A2P52657 109 aa7.32□□□□□ -1.24
MRPS28-203ENST00000518371 CENPCQ03188 943 aa7.32□□□□□ -1.24
MRPS28-203ENST00000518371 PPATQ06203 517 aa7.32□□□□□ -1.24
MRPS28-203ENST00000518371 SLC4A8Q2Y0W8 1093 aa7.32□□□□□ -1.24
MRPS28-203ENST00000518371 ZMYM1Q5SVZ6 1142 aa7.32□□□□□ -1.24
MRPS28-203ENST00000518371 AMOTL1Q8IY63 956 aa7.32□□□□□ -1.24
MRPS28-203ENST00000518371 SCYL3Q8IZE3 742 aa7.32□□□□□ -1.24
MRPS28-203ENST00000518371 GTPBP3Q969Y2 492 aaKnown RBP7.32□□□□□ -1.24
MRPS28-203ENST00000518371 EVI5LQ96CN4 794 aa7.32□□□□□ -1.24
MRPS28-203ENST00000518371 ESYT1Q9BSJ8 1104 aa7.32□□□□□ -1.24
MRPS28-203ENST00000518371 MCM9Q9NXL9 1143 aa7.32□□□□□ -1.24
MRPS28-203ENST00000518371 HERC5Q9UII4 1024 aaKnown RBP7.32□□□□□ -1.24
MRPS28-203ENST00000518371 SLC4A4Q9Y6R1 1079 aa7.32□□□□□ -1.24
MRPS28-203ENST00000518371 MYH2Q9UKX2 1941 aa7.32□□□□□ -1.24
MRPS28-203ENST00000518371 RFX7Q2KHR2 1363 aa7.32□□□□□ -1.24
MRPS28-203ENST00000518371 AKAP11Q9UKA4 1901 aa7.31□□□□□ -1.24
MRPS28-203ENST00000518371 CCL15-CCL14A0A0B4J2E2 113 aa7.31□□□□□ -1.24
MRPS28-203ENST00000518371 TBC1D8O95759 1140 aa7.31□□□□□ -1.24
MRPS28-203ENST00000518371 CHGBP05060 677 aa7.31□□□□□ -1.24
MRPS28-203ENST00000518371 APPP05067 770 aa7.31□□□□□ -1.24
MRPS28-203ENST00000518371 HSPA8P11142 646 aaKnown RBP7.31□□□□□ -1.24
MRPS28-203ENST00000518371 CETPP11597 493 aa7.31□□□□□ -1.24
MRPS28-203ENST00000518371 PTPRAP18433 802 aa7.31□□□□□ -1.24
MRPS28-203ENST00000518371 PPIL2Q13356 520 aa7.31□□□□□ -1.24
MRPS28-203ENST00000518371 SNAPC2Q13487 334 aa7.31□□□□□ -1.24
MRPS28-203ENST00000518371 MCM6Q14566 821 aa7.31□□□□□ -1.24
MRPS28-203ENST00000518371 CCL15Q16663 113 aa7.31□□□□□ -1.24
MRPS28-203ENST00000518371 NOL9Q5SY16 702 aaKnown RBP7.31□□□□□ -1.24
MRPS28-203ENST00000518371 PLEKHM2Q8IWE5 1019 aa7.31□□□□□ -1.24
MRPS28-203ENST00000518371 SDR42E1Q8WUS8 393 aa7.31□□□□□ -1.24
MRPS28-203ENST00000518371 APPBP2Q92624 585 aa7.31□□□□□ -1.24
MRPS28-203ENST00000518371 RILPL2Q969X0 211 aa7.31□□□□□ -1.24
MRPS28-203ENST00000518371 PUS7LQ9H0K6 701 aaKnown RBP7.31□□□□□ -1.24
MRPS28-203ENST00000518371 SEMA6BQ9H3T3 888 aa7.31□□□□□ -1.24
MRPS28-203ENST00000518371 TIMMDC1Q9NPL8 285 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms