RNA–Protein interactions for RNA: ENST00000518251.1

BRD9-216, Transcript of bromodomain containing 9, humanhuman

TSL 4

Gene BRD9, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-216ENST00000518251 CAP2P40123 477 aa12.15□□□□□ -0.46
BRD9-216ENST00000518251 FCGRTP55899 365 aa12.15□□□□□ -0.46
BRD9-216ENST00000518251 JAG1P78504 1218 aa12.15□□□□□ -0.46
BRD9-216ENST00000518251 GUCY1B3Q02153 619 aa12.15□□□□□ -0.46
BRD9-216ENST00000518251 FUT2Q10981 343 aa12.15□□□□□ -0.46
BRD9-216ENST00000518251 TRIM29Q14134 588 aa12.15□□□□□ -0.46
BRD9-216ENST00000518251 GPAT2Q6NUI2 795 aa12.15□□□□□ -0.46
BRD9-216ENST00000518251 RASGRP2Q7LDG7 609 aa12.15□□□□□ -0.46
BRD9-216ENST00000518251 SRBD1Q8N5C6 995 aaKnown RBP12.15□□□□□ -0.46
BRD9-216ENST00000518251 MKL1Q969V6 931 aa12.15□□□□□ -0.46
BRD9-216ENST00000518251 AIFM3Q96NN9 605 aa12.15□□□□□ -0.46
BRD9-216ENST00000518251 LZTS2Q9BRK4 669 aa12.15□□□□□ -0.46
BRD9-216ENST00000518251 RNF208Q9H0X6 261 aa12.15□□□□□ -0.46
BRD9-216ENST00000518251 UNC93B1Q9H1C4 597 aa12.15□□□□□ -0.46
BRD9-216ENST00000518251 ARHGEF10LQ9HCE6 1279 aa12.15□□□□□ -0.46
BRD9-216ENST00000518251 GINM1Q9NU53 330 aa12.15□□□□□ -0.46
BRD9-216ENST00000518251 SYNPO2Q9UMS6 1093 aa12.15□□□□□ -0.46
BRD9-216ENST00000518251 A0A0G2JLL6 359 aaPredicted RBP12.14□□□□□ -0.47
BRD9-216ENST00000518251 DDX11L8A8MPP1 907 aa12.14□□□□□ -0.47
BRD9-216ENST00000518251 GOLGA6L22H0YM25 854 aa12.14□□□□□ -0.47
BRD9-216ENST00000518251 SOX1O00570 391 aaPredicted RBP12.14□□□□□ -0.47
BRD9-216ENST00000518251 ASNSP08243 561 aa12.14□□□□□ -0.47
BRD9-216ENST00000518251 HOXD10P28358 340 aa12.14□□□□□ -0.47
BRD9-216ENST00000518251 UBXN2AP68543 259 aa12.14□□□□□ -0.47
BRD9-216ENST00000518251 RESTQ13127 1097 aa12.14□□□□□ -0.47
BRD9-216ENST00000518251 USP17L2Q6R6M4 530 aa12.14□□□□□ -0.47
BRD9-216ENST00000518251 PRRT2Q7Z6L0 340 aaPredicted RBP12.14□□□□□ -0.47
BRD9-216ENST00000518251 FERMT3Q86UX7 667 aa12.14□□□□□ -0.47
BRD9-216ENST00000518251 STAG2Q8N3U4 1231 aa12.14□□□□□ -0.47
BRD9-216ENST00000518251 FBXO18Q8NFZ0 1043 aa12.14□□□□□ -0.47
BRD9-216ENST00000518251 DCAF4Q8WV16 495 aa12.14□□□□□ -0.47
BRD9-216ENST00000518251 SPZ1Q9BXG8 430 aa12.14□□□□□ -0.47
BRD9-216ENST00000518251 ZSCAN16Q9H4T2 348 aaPredicted RBP12.14□□□□□ -0.47
BRD9-216ENST00000518251 FRMPD2Q68DX3 1309 aaPredicted RBP12.13□□□□□ -0.47
BRD9-216ENST00000518251 USP17L5A8MUK1 530 aa12.13□□□□□ -0.47
BRD9-216ENST00000518251 PHF20L1A8MW92 1017 aa12.13□□□□□ -0.47
BRD9-216ENST00000518251 KLRF2D3W0D1 207 aa12.13□□□□□ -0.47
BRD9-216ENST00000518251 INHAP05111 366 aa12.13□□□□□ -0.47
BRD9-216ENST00000518251 GOLGA8HP0CJ92 632 aa12.13□□□□□ -0.47
BRD9-216ENST00000518251 XBP1P17861 261 aa12.13□□□□□ -0.47
BRD9-216ENST00000518251 SMARCA1P28370 1054 aa12.13□□□□□ -0.47
BRD9-216ENST00000518251 ZNF543Q08ER8 600 aa12.13□□□□□ -0.47
BRD9-216ENST00000518251 CCDC96Q2M329 555 aa12.13□□□□□ -0.47
BRD9-216ENST00000518251 GPATCH4Q5T3I0 446 aaKnown RBP12.13□□□□□ -0.47
BRD9-216ENST00000518251 KRT40Q6A162 431 aa12.13□□□□□ -0.47
BRD9-216ENST00000518251 MCTP1Q6DN14 999 aa12.13□□□□□ -0.47
BRD9-216ENST00000518251 SCYL3Q8IZE3 742 aa12.13□□□□□ -0.47
BRD9-216ENST00000518251 GMCL1P1Q8NEA9 526 aa12.13□□□□□ -0.47
BRD9-216ENST00000518251 SH2D4AQ9H788 454 aa12.13□□□□□ -0.47
BRD9-216ENST00000518251 A0A1W2PPC1 479 aa12.12□□□□□ -0.47
BRD9-216ENST00000518251 CTNND1O60716 968 aaKnown RBP12.12□□□□□ -0.47
BRD9-216ENST00000518251 SCG2P13521 617 aa12.12□□□□□ -0.47
BRD9-216ENST00000518251 ELNP15502 786 aa12.12□□□□□ -0.47
BRD9-216ENST00000518251 PTMSP20962 102 aa12.12□□□□□ -0.47
BRD9-216ENST00000518251 NBR1Q14596 966 aa12.12□□□□□ -0.47
BRD9-216ENST00000518251 PKN1Q16512 942 aa12.12□□□□□ -0.47
BRD9-216ENST00000518251 PFKFB3Q16875 520 aaPredicted RBP12.12□□□□□ -0.47
BRD9-216ENST00000518251 SLFN13Q68D06 897 aa12.12□□□□□ -0.47
BRD9-216ENST00000518251 SIAH1Q8IUQ4 282 aa12.12□□□□□ -0.47
BRD9-216ENST00000518251 PAK6Q9NQU5 681 aaPredicted RBP12.12□□□□□ -0.47
BRD9-216ENST00000518251 GJB4Q9NTQ9 266 aa12.12□□□□□ -0.47
BRD9-216ENST00000518251 V9GY48 417 aaPredicted RBP12.12□□□□□ -0.47
BRD9-216ENST00000518251 LOC285556D6RIA3 1793 aa12.12□□□□□ -0.47
BRD9-216ENST00000518251 COL6A3P12111 3177 aa12.12□□□□□ -0.47
BRD9-216ENST00000518251 MGAMO43451 1857 aa12.11□□□□□ -0.47
BRD9-216ENST00000518251 hCG_1642624A0A1W2PR95 340 aa12.11□□□□□ -0.47
BRD9-216ENST00000518251 A0A1W2PRG0 241 aa12.11□□□□□ -0.47
BRD9-216ENST00000518251 F5H6K3 240 aa12.11□□□□□ -0.47
BRD9-216ENST00000518251 CXCL11O14625 94 aa12.11□□□□□ -0.47
BRD9-216ENST00000518251 CYTH3O43739 400 aa12.11□□□□□ -0.47
BRD9-216ENST00000518251 RAD21O60216 631 aa12.11□□□□□ -0.47
BRD9-216ENST00000518251 ADCY3O60266 1144 aa12.11□□□□□ -0.47
BRD9-216ENST00000518251 SGPL1O95470 568 aa12.11□□□□□ -0.47
BRD9-216ENST00000518251 NDUFB10O96000 172 aa12.11□□□□□ -0.47
BRD9-216ENST00000518251 PTPRAP18433 802 aa12.11□□□□□ -0.47
BRD9-216ENST00000518251 SLC1A4P43007 532 aa12.11□□□□□ -0.47
BRD9-216ENST00000518251 FLT3LGP49771 235 aa12.11□□□□□ -0.47
BRD9-216ENST00000518251 KLRC3Q07444 240 aa12.11□□□□□ -0.47
BRD9-216ENST00000518251 IRF5Q13568 498 aa12.11□□□□□ -0.47
BRD9-216ENST00000518251 SLC35G1Q2M3R5 365 aa12.11□□□□□ -0.47
BRD9-216ENST00000518251 FOXD4L6Q3SYB3 417 aaPredicted RBP12.11□□□□□ -0.47
BRD9-216ENST00000518251 FOXD4L3Q6VB84 417 aaPredicted RBP12.11□□□□□ -0.47
BRD9-216ENST00000518251 RRP36Q96EU6 259 aaKnown RBP12.11□□□□□ -0.47
BRD9-216ENST00000518251 LRCH3Q96II8 777 aa12.11□□□□□ -0.47
BRD9-216ENST00000518251 GMCL1Q96IK5 515 aa12.11□□□□□ -0.47
BRD9-216ENST00000518251 GOPCQ9HD26 462 aa12.11□□□□□ -0.47
BRD9-216ENST00000518251 GPCPD1Q9NPB8 672 aa12.11□□□□□ -0.47
BRD9-216ENST00000518251 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.11□□□□□ -0.47
BRD9-216ENST00000518251 BIN2Q9UBW5 565 aaPredicted RBP12.11□□□□□ -0.47
BRD9-216ENST00000518251 ISY1Q9ULR0 285 aaKnown RBP12.11□□□□□ -0.47
BRD9-216ENST00000518251 SLC45A1Q9Y2W3 748 aa12.11□□□□□ -0.47
BRD9-216ENST00000518251 TMX2Q9Y320 296 aa12.11□□□□□ -0.47
BRD9-216ENST00000518251 NR2E3Q9Y5X4 410 aa12.11□□□□□ -0.47
BRD9-216ENST00000518251 PHIPQ8WWQ0 1821 aa12.1□□□□□ -0.47
BRD9-216ENST00000518251 TNPO2O14787 897 aaKnown RBP12.1□□□□□ -0.47
BRD9-216ENST00000518251 MMP1P03956 469 aa12.1□□□□□ -0.47
BRD9-216ENST00000518251 NCLP19338 710 aaKnown RBP12.1□□□□□ -0.47
BRD9-216ENST00000518251 KRT85P78386 507 aa12.1□□□□□ -0.47
BRD9-216ENST00000518251 GNL2Q13823 731 aaKnown RBP12.1□□□□□ -0.47
BRD9-216ENST00000518251 SAFBQ15424 915 aaKnown RBP eCLIP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms