RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 NDUFB10O96000 172 aa13.63□□□□□ -0.23
CTNNA1-205ENST00000517904 CD4P01730 458 aa13.63□□□□□ -0.23
CTNNA1-205ENST00000517904 SLC4A3P48751 1232 aa13.63□□□□□ -0.23
CTNNA1-205ENST00000517904 MRPS5P82675 430 aaKnown RBP13.63□□□□□ -0.23
CTNNA1-205ENST00000517904 KLRC3Q07444 240 aa13.63□□□□□ -0.23
CTNNA1-205ENST00000517904 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.63□□□□□ -0.23
CTNNA1-205ENST00000517904 ARMCX2Q7L311 632 aa13.63□□□□□ -0.23
CTNNA1-205ENST00000517904 CPXCR1Q8N123 301 aa13.63□□□□□ -0.23
CTNNA1-205ENST00000517904 PANK1Q8TE04 598 aa13.63□□□□□ -0.23
CTNNA1-205ENST00000517904 HERVK_113Q902F9 699 aa13.63□□□□□ -0.23
CTNNA1-205ENST00000517904 VTI1AQ96AJ9 217 aa13.63□□□□□ -0.23
CTNNA1-205ENST00000517904 UHRF1Q96T88 793 aaPredicted RBP13.63□□□□□ -0.23
CTNNA1-205ENST00000517904 PUS7LQ9H0K6 701 aaKnown RBP13.63□□□□□ -0.23
CTNNA1-205ENST00000517904 NKX2-4Q9H2Z4 354 aa13.63□□□□□ -0.23
CTNNA1-205ENST00000517904 ABHD16BQ9H3Z7 469 aa13.63□□□□□ -0.23
CTNNA1-205ENST00000517904 IL23AQ9NPF7 189 aa13.63□□□□□ -0.23
CTNNA1-205ENST00000517904 RASA1P20936 1047 aa13.62□□□□□ -0.23
CTNNA1-205ENST00000517904 IGFBP4P22692 258 aa13.62□□□□□ -0.23
CTNNA1-205ENST00000517904 BEX3Q00994 111 aa13.62□□□□□ -0.23
CTNNA1-205ENST00000517904 UBE3CQ15386 1083 aa13.62□□□□□ -0.23
CTNNA1-205ENST00000517904 RAB30Q15771 203 aa13.62□□□□□ -0.23
CTNNA1-205ENST00000517904 SIRT2Q8IXJ6 389 aa13.62□□□□□ -0.23
CTNNA1-205ENST00000517904 CCDC144CPQ8IYA2 1237 aa13.62□□□□□ -0.23
CTNNA1-205ENST00000517904 ANKRD35Q8N283 1001 aa13.62□□□□□ -0.23
CTNNA1-205ENST00000517904 PRPF38AQ8NAV1 312 aaKnown RBP13.62□□□□□ -0.23
CTNNA1-205ENST00000517904 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.62□□□□□ -0.233e-7■□□□□ 10.9
CTNNA1-205ENST00000517904 SPC25Q9HBM1 224 aa13.62□□□□□ -0.23
CTNNA1-205ENST00000517904 RAVER2Q9HCJ3 691 aaKnown RBP13.62□□□□□ -0.23
CTNNA1-205ENST00000517904 MSRAQ9UJ68 235 aa13.62□□□□□ -0.23
CTNNA1-205ENST00000517904 MYH4Q9Y623 1939 aa13.62□□□□□ -0.23
CTNNA1-205ENST00000517904 ASTN1O14525 1302 aa13.62□□□□□ -0.23
CTNNA1-205ENST00000517904 TCF20Q9UGU0 1960 aaKnown RBP13.62□□□□□ -0.23
CTNNA1-205ENST00000517904 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.61□□□□□ -0.23
CTNNA1-205ENST00000517904 TLR3O15455 904 aaKnown RBP13.61□□□□□ -0.23
CTNNA1-205ENST00000517904 ATP5JP18859 108 aa13.61□□□□□ -0.23
CTNNA1-205ENST00000517904 NKX3-2P78367 333 aa13.61□□□□□ -0.23
CTNNA1-205ENST00000517904 STK11IPQ8N1F8 1099 aa13.61□□□□□ -0.23
CTNNA1-205ENST00000517904 SLC43A3Q8NBI5 491 aa13.61□□□□□ -0.23
CTNNA1-205ENST00000517904 KIFC2Q96AC6 838 aa13.61□□□□□ -0.23
CTNNA1-205ENST00000517904 DDRGK1Q96HY6 314 aa13.61□□□□□ -0.23
CTNNA1-205ENST00000517904 NECAB3Q96P71 396 aaPredicted RBP13.61□□□□□ -0.23
CTNNA1-205ENST00000517904 HAUS7Q99871 368 aa13.61□□□□□ -0.23
CTNNA1-205ENST00000517904 SLC28A3Q9HAS3 691 aa13.61□□□□□ -0.23
CTNNA1-205ENST00000517904 SLC38A10Q9HBR0 1119 aa13.61□□□□□ -0.23
CTNNA1-205ENST00000517904 NYAP2Q9P242 653 aa13.61□□□□□ -0.23
CTNNA1-205ENST00000517904 ARPP21Q9UBL0 812 aaPredicted RBP13.61□□□□□ -0.23
CTNNA1-205ENST00000517904 IGKV6D-41A0A0C4DH26 115 aa13.6□□□□□ -0.23
CTNNA1-205ENST00000517904 LRRC37A2A6NM11 1700 aa13.6□□□□□ -0.23
CTNNA1-205ENST00000517904 ZBED4O75132 1171 aa13.6□□□□□ -0.23
CTNNA1-205ENST00000517904 FGBP02675 491 aa13.6□□□□□ -0.23
CTNNA1-205ENST00000517904 PTGS1P23219 599 aa13.6□□□□□ -0.23
CTNNA1-205ENST00000517904 PLA2G5P39877 138 aa13.6□□□□□ -0.23
CTNNA1-205ENST00000517904 CNTN2Q02246 1040 aa13.6□□□□□ -0.23
CTNNA1-205ENST00000517904 CXCL17Q6UXB2 119 aa13.6□□□□□ -0.23
CTNNA1-205ENST00000517904 OTOP2Q7RTS6 562 aa13.6□□□□□ -0.23
CTNNA1-205ENST00000517904 VWCEQ96DN2 955 aa13.6□□□□□ -0.23
CTNNA1-205ENST00000517904 HIPK3Q9H422 1215 aa13.6□□□□□ -0.23
CTNNA1-205ENST00000517904 CLIP2Q9UDT6 1046 aa13.6□□□□□ -0.23
CTNNA1-205ENST00000517904 GRIN2DO15399 1336 aa13.6□□□□□ -0.23
CTNNA1-205ENST00000517904 MYOGP15173 224 aa13.59□□□□□ -0.23
CTNNA1-205ENST00000517904 RABGGTBP53611 331 aa13.59□□□□□ -0.23
CTNNA1-205ENST00000517904 CCL23P55773 120 aa13.59□□□□□ -0.23
CTNNA1-205ENST00000517904 SBK1Q52WX2 424 aa13.59□□□□□ -0.23
CTNNA1-205ENST00000517904 CHST13Q8NET6 341 aa13.59□□□□□ -0.23
CTNNA1-205ENST00000517904 WNT8AQ9H1J5 351 aa13.59□□□□□ -0.23
CTNNA1-205ENST00000517904 HOMER2Q9NSB8 354 aa13.59□□□□□ -0.23
CTNNA1-205ENST00000517904 FBXO40Q9UH90 709 aa13.59□□□□□ -0.23
CTNNA1-205ENST00000517904 GNEQ9Y223 722 aaKnown RBP13.59□□□□□ -0.23
CTNNA1-205ENST00000517904 DDX49Q9Y6V7 483 aaKnown RBP13.59□□□□□ -0.23
CTNNA1-205ENST00000517904 PRRC2BQ5JSZ5 2229 aaKnown RBP13.59□□□□□ -0.23
CTNNA1-205ENST00000517904 GSG1L2A8MUP6 293 aa13.58□□□□□ -0.24
CTNNA1-205ENST00000517904 BMP1P13497 986 aa13.58□□□□□ -0.24
CTNNA1-205ENST00000517904 TNFAIP2Q03169 654 aa13.58□□□□□ -0.24
CTNNA1-205ENST00000517904 TFF2Q03403 129 aa13.58□□□□□ -0.24
CTNNA1-205ENST00000517904 ITGA7Q13683 1181 aa13.58□□□□□ -0.24
CTNNA1-205ENST00000517904 RPAP2Q8IXW5 612 aaPredicted RBP13.58□□□□□ -0.24
CTNNA1-205ENST00000517904 LRRC47Q8N1G4 583 aaKnown RBP13.58□□□□□ -0.24
CTNNA1-205ENST00000517904 FAM133AQ8N9E0 248 aa13.58□□□□□ -0.24
CTNNA1-205ENST00000517904 STRBPQ96SI9 672 aaKnown RBP13.58□□□□□ -0.24
CTNNA1-205ENST00000517904 NOC4LQ9BVI4 516 aaKnown RBP13.58□□□□□ -0.24
CTNNA1-205ENST00000517904 TRPV6Q9H1D0 765 aa13.58□□□□□ -0.24
CTNNA1-205ENST00000517904 MTIF3Q9H2K0 278 aaKnown RBP13.58□□□□□ -0.24
CTNNA1-205ENST00000517904 MKNK2Q9HBH9 465 aa13.58□□□□□ -0.24
CTNNA1-205ENST00000517904 CTDP1Q9Y5B0 961 aaPredicted RBP13.58□□□□□ -0.24
CTNNA1-205ENST00000517904 SOWAHBA6NEL2 793 aa13.57□□□□□ -0.24
CTNNA1-205ENST00000517904 MINDY4BA8MYZ0 360 aa13.57□□□□□ -0.24
CTNNA1-205ENST00000517904 B4GALT4O60513 344 aa13.57□□□□□ -0.24
CTNNA1-205ENST00000517904 RAB11FIP3O75154 756 aa13.57□□□□□ -0.24
CTNNA1-205ENST00000517904 PRDM1O75626 825 aa13.57□□□□□ -0.24
CTNNA1-205ENST00000517904 OAZ1P54368 228 aa13.57□□□□□ -0.24
CTNNA1-205ENST00000517904 FSCN1Q16658 493 aaKnown RBP13.57□□□□□ -0.24
CTNNA1-205ENST00000517904 TMEM63BQ5T3F8 832 aa13.57□□□□□ -0.24
CTNNA1-205ENST00000517904 PPP2R2DQ66LE6 453 aa13.57□□□□□ -0.24
CTNNA1-205ENST00000517904 TLK2Q86UE8 772 aa13.57□□□□□ -0.24
CTNNA1-205ENST00000517904 MICALL1Q8N3F8 863 aa13.57□□□□□ -0.24
CTNNA1-205ENST00000517904 IL27Q8NEV9 243 aa13.57□□□□□ -0.24
CTNNA1-205ENST00000517904 MKL1Q969V6 931 aa13.57□□□□□ -0.24
CTNNA1-205ENST00000517904 CEP95Q96GE4 821 aa13.57□□□□□ -0.24
CTNNA1-205ENST00000517904 EPB41L4AQ9HCS5 686 aaPredicted RBP13.57□□□□□ -0.24
CTNNA1-205ENST00000517904 A1CFQ9NQ94 594 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms