RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 ZBED4O75132 1171 aa13.75□□□□□ -0.21
TRAPPC9-203ENST00000517667 CABYRO75952 493 aa13.75□□□□□ -0.21
TRAPPC9-203ENST00000517667 IFIT2P09913 472 aaKnown RBP13.75□□□□□ -0.21
TRAPPC9-203ENST00000517667 CYP2C18P33260 490 aa13.75□□□□□ -0.21
TRAPPC9-203ENST00000517667 ADD2P35612 726 aa13.75□□□□□ -0.21
TRAPPC9-203ENST00000517667 NKX3-2P78367 333 aa13.75□□□□□ -0.21
TRAPPC9-203ENST00000517667 ARMCX2Q7L311 632 aa13.75□□□□□ -0.21
TRAPPC9-203ENST00000517667 NKX2-4Q9H2Z4 354 aa13.75□□□□□ -0.21
TRAPPC9-203ENST00000517667 HIPK3Q9H422 1215 aa13.75□□□□□ -0.21
TRAPPC9-203ENST00000517667 ARPP21Q9UBL0 812 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC9-203ENST00000517667 RIPK3Q9Y572 518 aa13.75□□□□□ -0.21
TRAPPC9-203ENST00000517667 LRRC37A2A6NM11 1700 aa13.74□□□□□ -0.21
TRAPPC9-203ENST00000517667 OAZ1P54368 228 aa13.74□□□□□ -0.21
TRAPPC9-203ENST00000517667 PPP2R2DQ66LE6 453 aa13.74□□□□□ -0.21
TRAPPC9-203ENST00000517667 CHST13Q8NET6 341 aa13.74□□□□□ -0.21
TRAPPC9-203ENST00000517667 KIF1BPQ96EK5 621 aa13.74□□□□□ -0.21
TRAPPC9-203ENST00000517667 NYAP2Q9P242 653 aa13.74□□□□□ -0.21
TRAPPC9-203ENST00000517667 YBX2Q9Y2T7 364 aaKnown RBP13.74□□□□□ -0.21
TRAPPC9-203ENST00000517667 ARIH1Q9Y4X5 557 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC9-203ENST00000517667 SLC4A4Q9Y6R1 1079 aa13.74□□□□□ -0.21
TRAPPC9-203ENST00000517667 TCF20Q9UGU0 1960 aaKnown RBP13.73□□□□□ -0.21
TRAPPC9-203ENST00000517667 F5H6K3 240 aa13.73□□□□□ -0.21
TRAPPC9-203ENST00000517667 SLC4A3P48751 1232 aa13.73□□□□□ -0.21
TRAPPC9-203ENST00000517667 IRX5P78411 483 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC9-203ENST00000517667 KLRC3Q07444 240 aa13.73□□□□□ -0.21
TRAPPC9-203ENST00000517667 UBE3CQ15386 1083 aa13.73□□□□□ -0.21
TRAPPC9-203ENST00000517667 CTR9Q6PD62 1173 aa13.73□□□□□ -0.21
TRAPPC9-203ENST00000517667 OTOP2Q7RTS6 562 aa13.73□□□□□ -0.21
TRAPPC9-203ENST00000517667 CCDC144CPQ8IYA2 1237 aa13.73□□□□□ -0.21
TRAPPC9-203ENST00000517667 RPUSD2Q8IZ73 545 aaKnown RBP13.73□□□□□ -0.21
TRAPPC9-203ENST00000517667 CPXCR1Q8N123 301 aa13.73□□□□□ -0.21
TRAPPC9-203ENST00000517667 SLC43A3Q8NBI5 491 aa13.73□□□□□ -0.21
TRAPPC9-203ENST00000517667 NUP88Q99567 741 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC9-203ENST00000517667 SLC38A10Q9HBR0 1119 aa13.73□□□□□ -0.21
TRAPPC9-203ENST00000517667 PCDHA11Q9Y5I1 949 aa13.73□□□□□ -0.21
TRAPPC9-203ENST00000517667 SLC4A7Q9Y6M7 1214 aa13.73□□□□□ -0.21
TRAPPC9-203ENST00000517667 SMIM22K7EJ46 135 aa13.72□□□□□ -0.21
TRAPPC9-203ENST00000517667 CTAGE5O15320 804 aa13.72□□□□□ -0.21
TRAPPC9-203ENST00000517667 ZEB2O60315 1214 aa13.72□□□□□ -0.21
TRAPPC9-203ENST00000517667 NDUFB10O96000 172 aa13.72□□□□□ -0.21
TRAPPC9-203ENST00000517667 BMP1P13497 986 aa13.72□□□□□ -0.21
TRAPPC9-203ENST00000517667 TNFAIP2Q03169 654 aa13.72□□□□□ -0.21
TRAPPC9-203ENST00000517667 ZSCAN25Q6NSZ9 544 aa13.72□□□□□ -0.21
TRAPPC9-203ENST00000517667 MICALL1Q8N3F8 863 aa13.72□□□□□ -0.21
TRAPPC9-203ENST00000517667 KIFC2Q96AC6 838 aa13.72□□□□□ -0.21
TRAPPC9-203ENST00000517667 FGD4Q96M96 766 aa13.72□□□□□ -0.21
TRAPPC9-203ENST00000517667 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.72□□□□□ -0.21
TRAPPC9-203ENST00000517667 FEM1BQ9UK73 627 aa13.72□□□□□ -0.21
TRAPPC9-203ENST00000517667 SYNPO2Q9UMS6 1093 aa13.72□□□□□ -0.21
TRAPPC9-203ENST00000517667 HCN4Q9Y3Q4 1203 aa13.72□□□□□ -0.21
TRAPPC9-203ENST00000517667 ERC2O15083 957 aa13.71□□□□□ -0.21
TRAPPC9-203ENST00000517667 GTPBP6O43824 516 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC9-203ENST00000517667 PFKMP08237 780 aa13.71□□□□□ -0.21
TRAPPC9-203ENST00000517667 FDX1P10109 184 aa13.71□□□□□ -0.21
TRAPPC9-203ENST00000517667 RLBP1P12271 317 aa13.71□□□□□ -0.21
TRAPPC9-203ENST00000517667 ATP5JP18859 108 aa13.71□□□□□ -0.21
TRAPPC9-203ENST00000517667 HOXD11P31277 338 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC9-203ENST00000517667 BEX3Q00994 111 aa13.71□□□□□ -0.21
TRAPPC9-203ENST00000517667 ITGA7Q13683 1181 aa13.71□□□□□ -0.21
TRAPPC9-203ENST00000517667 FSCN1Q16658 493 aaKnown RBP13.71□□□□□ -0.21
TRAPPC9-203ENST00000517667 CXCL17Q6UXB2 119 aa13.71□□□□□ -0.21
TRAPPC9-203ENST00000517667 NOL8Q76FK4 1167 aaKnown RBP13.71□□□□□ -0.21
TRAPPC9-203ENST00000517667 TLK2Q86UE8 772 aa13.71□□□□□ -0.21
TRAPPC9-203ENST00000517667 NOC4LQ9BVI4 516 aaKnown RBP13.71□□□□□ -0.21
TRAPPC9-203ENST00000517667 KATNBL1Q9H079 304 aa13.71□□□□□ -0.21
TRAPPC9-203ENST00000517667 MKNK2Q9HBH9 465 aa13.71□□□□□ -0.21
TRAPPC9-203ENST00000517667 RAVER2Q9HCJ3 691 aaKnown RBP13.71□□□□□ -0.21
TRAPPC9-203ENST00000517667 UMODL1Q5DID0 1318 aa13.7□□□□□ -0.22
TRAPPC9-203ENST00000517667 ASB14A6NK59 587 aa13.7□□□□□ -0.22
TRAPPC9-203ENST00000517667 HMMRO75330 724 aa13.7□□□□□ -0.22
TRAPPC9-203ENST00000517667 ATP2A2P16615 1042 aaKnown RBP13.7□□□□□ -0.22
TRAPPC9-203ENST00000517667 POU3F3P20264 500 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC9-203ENST00000517667 RASA1P20936 1047 aa13.7□□□□□ -0.22
TRAPPC9-203ENST00000517667 SKIV2LQ15477 1246 aaKnown RBP13.7□□□□□ -0.22
TRAPPC9-203ENST00000517667 SBK1Q52WX2 424 aa13.7□□□□□ -0.22
TRAPPC9-203ENST00000517667 NECAB3Q96P71 396 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC9-203ENST00000517667 HAUS7Q99871 368 aa13.7□□□□□ -0.22
TRAPPC9-203ENST00000517667 AP5M1Q9H0R1 490 aa13.7□□□□□ -0.22
TRAPPC9-203ENST00000517667 ACAD9Q9H845 621 aa13.7□□□□□ -0.22
TRAPPC9-203ENST00000517667 ZNF287Q9HBT7 754 aa13.7□□□□□ -0.22
TRAPPC9-203ENST00000517667 ASTN1O14525 1302 aa13.69□□□□□ -0.22
TRAPPC9-203ENST00000517667 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.69□□□□□ -0.22
TRAPPC9-203ENST00000517667 ZBBXA8MT70 800 aa13.69□□□□□ -0.22
TRAPPC9-203ENST00000517667 CCER2I3L3R5 266 aa13.69□□□□□ -0.22
TRAPPC9-203ENST00000517667 RAB11FIP3O75154 756 aa13.69□□□□□ -0.22
TRAPPC9-203ENST00000517667 RABGGTBP53611 331 aa13.69□□□□□ -0.22
TRAPPC9-203ENST00000517667 CCL23P55773 120 aa13.69□□□□□ -0.22
TRAPPC9-203ENST00000517667 TFF2Q03403 129 aa13.69□□□□□ -0.22
TRAPPC9-203ENST00000517667 SLFNL1Q499Z3 407 aa13.69□□□□□ -0.22
TRAPPC9-203ENST00000517667 GIMAP6Q6P9H5 292 aa13.69□□□□□ -0.22
TRAPPC9-203ENST00000517667 RPAP2Q8IXW5 612 aaPredicted RBP13.69□□□□□ -0.22
TRAPPC9-203ENST00000517667 FAM133AQ8N9E0 248 aa13.69□□□□□ -0.22
TRAPPC9-203ENST00000517667 GMCL1P1Q8NEA9 526 aa13.69□□□□□ -0.22
TRAPPC9-203ENST00000517667 MKL1Q969V6 931 aa13.69□□□□□ -0.22
TRAPPC9-203ENST00000517667 WNT8AQ9H1J5 351 aa13.69□□□□□ -0.22
TRAPPC9-203ENST00000517667 BOLA2Q9H3K6 86 aa13.69□□□□□ -0.22
TRAPPC9-203ENST00000517667 CLIP2Q9UDT6 1046 aa13.69□□□□□ -0.22
TRAPPC9-203ENST00000517667 COG5Q9UP83 839 aa13.69□□□□□ -0.22
TRAPPC9-203ENST00000517667 GNEQ9Y223 722 aaKnown RBP13.69□□□□□ -0.22
TRAPPC9-203ENST00000517667 Q9Y3F1 56 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms