RNA–Protein interactions for RNA: ENST00000517656.5

CTNNA1-204, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-204ENST00000517656 FAM160B2Q86V87 743 aa10□□□□□ -0.81
CTNNA1-204ENST00000517656 KLHDC9Q8NEP7 349 aa10□□□□□ -0.81
CTNNA1-204ENST00000517656 CHURC1Q8WUH1 139 aa10□□□□□ -0.81
CTNNA1-204ENST00000517656 STAG1Q8WVM7 1258 aa10□□□□□ -0.81
CTNNA1-204ENST00000517656 EVI5LQ96CN4 794 aa10□□□□□ -0.81
CTNNA1-204ENST00000517656 FGD4Q96M96 766 aa10□□□□□ -0.81
CTNNA1-204ENST00000517656 CRBNQ96SW2 442 aa10□□□□□ -0.81
CTNNA1-204ENST00000517656 ABHD16BQ9H3Z7 469 aa10□□□□□ -0.81
CTNNA1-204ENST00000517656 CDKN2AIPQ9NXV6 580 aaPredicted RBP10□□□□□ -0.81
CTNNA1-204ENST00000517656 ZBTB47Q9UFB7 747 aaPredicted RBP10□□□□□ -0.81
CTNNA1-204ENST00000517656 ANAPC4Q9UJX5 808 aa10□□□□□ -0.81
CTNNA1-204ENST00000517656 STX8Q9UNK0 236 aa10□□□□□ -0.81
CTNNA1-204ENST00000517656 TSPY2A6NKD2 308 aa9.99□□□□□ -0.81
CTNNA1-204ENST00000517656 KIAA0355O15063 1070 aa9.99□□□□□ -0.81
CTNNA1-204ENST00000517656 PQBP1O60828 265 aaKnown RBP9.99□□□□□ -0.81
CTNNA1-204ENST00000517656 MCCP23508 829 aa9.99□□□□□ -0.81
CTNNA1-204ENST00000517656 CST5P28325 142 aaPredicted RBP9.99□□□□□ -0.81
CTNNA1-204ENST00000517656 NOVP48745 357 aa9.99□□□□□ -0.81
CTNNA1-204ENST00000517656 CTDSPL2Q05D32 466 aa9.99□□□□□ -0.81
CTNNA1-204ENST00000517656 HDAC1Q13547 482 aaPredicted RBP9.99□□□□□ -0.81
CTNNA1-204ENST00000517656 SHHQ15465 462 aa9.99□□□□□ -0.81
CTNNA1-204ENST00000517656 TKFCQ3LXA3 575 aa9.99□□□□□ -0.81
CTNNA1-204ENST00000517656 C9orf50Q5SZB4 431 aa9.99□□□□□ -0.81
CTNNA1-204ENST00000517656 VPS53Q5VIR6 699 aa9.99□□□□□ -0.81
CTNNA1-204ENST00000517656 CCSAPQ6IQ19 270 aaPredicted RBP9.99□□□□□ -0.81
CTNNA1-204ENST00000517656 ARMCX2Q7L311 632 aa9.99□□□□□ -0.81
CTNNA1-204ENST00000517656 ANKRD33Q7Z3H0 272 aa9.99□□□□□ -0.81
CTNNA1-204ENST00000517656 TICAM2Q86XR7 235 aa9.99□□□□□ -0.81
CTNNA1-204ENST00000517656 FAM133AQ8N9E0 248 aa9.99□□□□□ -0.81
CTNNA1-204ENST00000517656 NUP133Q8WUM0 1156 aa9.99□□□□□ -0.81
CTNNA1-204ENST00000517656 TOX2Q96NM4 488 aa9.99□□□□□ -0.81
CTNNA1-204ENST00000517656 KATNBL1Q9H079 304 aa9.99□□□□□ -0.81
CTNNA1-204ENST00000517656 ACAD9Q9H845 621 aa9.99□□□□□ -0.81
CTNNA1-204ENST00000517656 STARD7Q9NQZ5 370 aa9.99□□□□□ -0.81
CTNNA1-204ENST00000517656 IL17RBQ9NRM6 502 aa9.99□□□□□ -0.81
CTNNA1-204ENST00000517656 HELLSQ9NRZ9 838 aa9.99□□□□□ -0.81
CTNNA1-204ENST00000517656 HOMER2Q9NSB8 354 aa9.99□□□□□ -0.81
CTNNA1-204ENST00000517656 ISY1Q9ULR0 285 aaKnown RBP9.99□□□□□ -0.81
CTNNA1-204ENST00000517656 PLXNA1Q9UIW2 1896 aa9.99□□□□□ -0.81
CTNNA1-204ENST00000517656 ZNF536O15090 1300 aa9.99□□□□□ -0.81
CTNNA1-204ENST00000517656 ZNFX1Q9P2E3 1918 aaKnown RBP9.99□□□□□ -0.81
CTNNA1-204ENST00000517656 CUL9Q8IWT3 2517 aa9.98□□□□□ -0.81
CTNNA1-204ENST00000517656 MYH4Q9Y623 1939 aa9.98□□□□□ -0.81
CTNNA1-204ENST00000517656 MYADML2A6NDP7 307 aa9.98□□□□□ -0.81
CTNNA1-204ENST00000517656 ADCY6O43306 1168 aa9.98□□□□□ -0.81
CTNNA1-204ENST00000517656 ORC4O43929 436 aa9.98□□□□□ -0.81
CTNNA1-204ENST00000517656 NMT2O60551 498 aa9.98□□□□□ -0.81
CTNNA1-204ENST00000517656 FGRP09769 529 aa9.98□□□□□ -0.81
CTNNA1-204ENST00000517656 ITGB8P26012 769 aa9.98□□□□□ -0.81
CTNNA1-204ENST00000517656 PDE1AP54750 535 aa9.98□□□□□ -0.81
CTNNA1-204ENST00000517656 GJA9P57773 515 aa9.98□□□□□ -0.81
CTNNA1-204ENST00000517656 IKQ13123 557 aaPredicted RBP9.98□□□□□ -0.81
CTNNA1-204ENST00000517656 ALX1Q15699 326 aa9.98□□□□□ -0.81
CTNNA1-204ENST00000517656 KCNA10Q16322 511 aa9.98□□□□□ -0.81
CTNNA1-204ENST00000517656 CCDC144BQ3MJ40 725 aa9.98□□□□□ -0.81
CTNNA1-204ENST00000517656 RCSD1Q6JBY9 416 aa9.98□□□□□ -0.81
CTNNA1-204ENST00000517656 CCDC144CPQ8IYA2 1237 aa9.98□□□□□ -0.81
CTNNA1-204ENST00000517656 AGBL1Q96MI9 1066 aa9.98□□□□□ -0.81
CTNNA1-204ENST00000517656 GUCD1Q96NT3 240 aa9.98□□□□□ -0.81
CTNNA1-204ENST00000517656 UPF3AQ9H1J1 476 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-204ENST00000517656 SPC25Q9HBM1 224 aa9.98□□□□□ -0.81
CTNNA1-204ENST00000517656 A1CFQ9NQ94 594 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-204ENST00000517656 INCENPQ9NQS7 918 aa9.98□□□□□ -0.81
CTNNA1-204ENST00000517656 RNF146Q9NTX7 359 aa9.98□□□□□ -0.81
CTNNA1-204ENST00000517656 TMEM39AQ9NV64 488 aa9.98□□□□□ -0.81
CTNNA1-204ENST00000517656 EYSQ5T1H1 3165 aa9.98□□□□□ -0.81
CTNNA1-204ENST00000517656 ELP1O95163 1332 aa9.98□□□□□ -0.81
CTNNA1-204ENST00000517656 SOWAHBA6NEL2 793 aa9.97□□□□□ -0.81
CTNNA1-204ENST00000517656 DCDC2CA8MYV0 355 aa9.97□□□□□ -0.81
CTNNA1-204ENST00000517656 RANBP6O60518 1105 aaKnown RBP9.97□□□□□ -0.81
CTNNA1-204ENST00000517656 C6orf222P0C671 652 aaPredicted RBP9.97□□□□□ -0.81
CTNNA1-204ENST00000517656 RAG1P15918 1043 aa9.97□□□□□ -0.81
CTNNA1-204ENST00000517656 NKX3-2P78367 333 aa9.97□□□□□ -0.81
CTNNA1-204ENST00000517656 SMAD3P84022 425 aaKnown RBP9.97□□□□□ -0.81
CTNNA1-204ENST00000517656 CNTN2Q02246 1040 aa9.97□□□□□ -0.81
CTNNA1-204ENST00000517656 FAAP100Q0VG06 881 aa9.97□□□□□ -0.81
CTNNA1-204ENST00000517656 MCMDC2Q4G0Z9 681 aa9.97□□□□□ -0.81
CTNNA1-204ENST00000517656 ZNF697Q5TEC3 545 aa9.97□□□□□ -0.81
CTNNA1-204ENST00000517656 KCTD1Q719H9 257 aa9.97□□□□□ -0.81
CTNNA1-204ENST00000517656 RASGRP2Q7LDG7 609 aa9.97□□□□□ -0.81
CTNNA1-204ENST00000517656 PCSK9Q8NBP7 692 aaKnown RBP9.97□□□□□ -0.81
CTNNA1-204ENST00000517656 GLT1D1Q96MS3 346 aa9.97□□□□□ -0.81
CTNNA1-204ENST00000517656 TRERF1Q96PN7 1200 aa9.97□□□□□ -0.81
CTNNA1-204ENST00000517656 PRR12Q9ULL5 1215 aa9.97□□□□□ -0.81
CTNNA1-204ENST00000517656 VCANP13611 3396 aa9.97□□□□□ -0.81
CTNNA1-204ENST00000517656 ZMYM6O95789 1325 aa9.97□□□□□ -0.81
CTNNA1-204ENST00000517656 SMCHD1A6NHR9 2005 aa9.97□□□□□ -0.81
CTNNA1-204ENST00000517656 A0A0D9SFI3 127 aa9.96□□□□□ -0.82
CTNNA1-204ENST00000517656 ASB14A6NK59 587 aa9.96□□□□□ -0.82
CTNNA1-204ENST00000517656 DLL1O00548 723 aa9.96□□□□□ -0.82
CTNNA1-204ENST00000517656 FGAP02671 866 aa9.96□□□□□ -0.82
CTNNA1-204ENST00000517656 ASGR1P07306 291 aa9.96□□□□□ -0.82
CTNNA1-204ENST00000517656 ALAS1P13196 640 aa9.96□□□□□ -0.82
CTNNA1-204ENST00000517656 CDK7P50613 346 aa9.96□□□□□ -0.82
CTNNA1-204ENST00000517656 EPHB4P54760 987 aa9.96□□□□□ -0.82
CTNNA1-204ENST00000517656 IRX5P78411 483 aaPredicted RBP9.96□□□□□ -0.82
CTNNA1-204ENST00000517656 FPGSQ05932 587 aa9.96□□□□□ -0.82
CTNNA1-204ENST00000517656 AAMPQ13685 434 aa9.96□□□□□ -0.82
CTNNA1-204ENST00000517656 CCDC174Q6PII3 467 aa9.96□□□□□ -0.82
CTNNA1-204ENST00000517656 DCAF4Q8WV16 495 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms