RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 PHKBQ93100 1093 aa11.49□□□□□ -0.57
CLN8-202ENST00000517514 ZSCAN31Q96LW9 406 aaPredicted RBP11.49□□□□□ -0.57
CLN8-202ENST00000517514 VAT1LQ9HCJ6 419 aa11.49□□□□□ -0.57
CLN8-202ENST00000517514 WBP1LQ9NX94 342 aa11.49□□□□□ -0.57
CLN8-202ENST00000517514 CPA4Q9UI42 421 aa11.49□□□□□ -0.57
CLN8-202ENST00000517514 RABGAP1Q9Y3P9 1069 aa11.49□□□□□ -0.57
CLN8-202ENST00000517514 RIPK3Q9Y572 518 aa11.49□□□□□ -0.57
CLN8-202ENST00000517514 TBC1D8O95759 1140 aa11.48□□□□□ -0.57
CLN8-202ENST00000517514 CTGFP29279 349 aa11.48□□□□□ -0.57
CLN8-202ENST00000517514 MCM2P49736 904 aa11.48□□□□□ -0.57
CLN8-202ENST00000517514 CDC37Q16543 378 aaPredicted RBP11.48□□□□□ -0.57
CLN8-202ENST00000517514 QRICH1Q2TAL8 776 aa11.48□□□□□ -0.57
CLN8-202ENST00000517514 SMARCC2Q8TAQ2 1214 aa11.48□□□□□ -0.57
CLN8-202ENST00000517514 AGBL1Q96MI9 1066 aa11.48□□□□□ -0.57
CLN8-202ENST00000517514 PARK7Q99497 189 aaKnown RBP11.48□□□□□ -0.57
CLN8-202ENST00000517514 LZTS2Q9BRK4 669 aa11.48□□□□□ -0.57
CLN8-202ENST00000517514 RAVER2Q9HCJ3 691 aaKnown RBP11.48□□□□□ -0.57
CLN8-202ENST00000517514 SH2B1Q9NRF2 756 aaPredicted RBP11.48□□□□□ -0.57
CLN8-202ENST00000517514 PNMA3Q9UL41 463 aa11.48□□□□□ -0.57
CLN8-202ENST00000517514 ISY1Q9ULR0 285 aaKnown RBP11.48□□□□□ -0.57
CLN8-202ENST00000517514 OPLAHO14841 1288 aa11.47□□□□□ -0.57
CLN8-202ENST00000517514 ATP2A1O14983 1001 aa11.47□□□□□ -0.57
CLN8-202ENST00000517514 ZBTB5O15062 677 aa11.47□□□□□ -0.57
CLN8-202ENST00000517514 ADAMTS3O15072 1205 aa11.47□□□□□ -0.57
CLN8-202ENST00000517514 PRPF3O43395 683 aaKnown RBP11.47□□□□□ -0.57
CLN8-202ENST00000517514 FMNL1O95466 1100 aaPredicted RBP11.47□□□□□ -0.57
CLN8-202ENST00000517514 ALDH1A1P00352 501 aa11.47□□□□□ -0.57
CLN8-202ENST00000517514 GCLCP48506 637 aaPredicted RBP11.47□□□□□ -0.57
CLN8-202ENST00000517514 ERVK-9P63128 1117 aa11.47□□□□□ -0.57
CLN8-202ENST00000517514 ERVK-24P63145 666 aa11.47□□□□□ -0.57
CLN8-202ENST00000517514 IKQ13123 557 aaPredicted RBP11.47□□□□□ -0.57
CLN8-202ENST00000517514 OTUD7BQ6GQQ9 843 aa11.47□□□□□ -0.57
CLN8-202ENST00000517514 TYW1BQ6NUM6 668 aa11.47□□□□□ -0.57
CLN8-202ENST00000517514 CCDC174Q6PII3 467 aa11.47□□□□□ -0.57
CLN8-202ENST00000517514 ANKRD13CQ8N6S4 541 aa11.47□□□□□ -0.57
CLN8-202ENST00000517514 PIBF1Q8WXW3 757 aa11.47□□□□□ -0.57
CLN8-202ENST00000517514 AIFM3Q96NN9 605 aa11.47□□□□□ -0.57
CLN8-202ENST00000517514 PAGR1Q9BTK6 254 aa11.47□□□□□ -0.57
CLN8-202ENST00000517514 MOV10L1Q9BXT6 1211 aaKnown RBP11.47□□□□□ -0.57
CLN8-202ENST00000517514 PORCNQ9H237 461 aa11.47□□□□□ -0.57
CLN8-202ENST00000517514 ZFYVE28Q9HCC9 887 aa11.47□□□□□ -0.57
CLN8-202ENST00000517514 V9GY48 417 aaPredicted RBP11.47□□□□□ -0.57
CLN8-202ENST00000517514 HTTP42858 3142 aa11.47□□□□□ -0.57
CLN8-202ENST00000517514 PNMA6FA0A0J9YX94 578 aa11.46□□□□□ -0.57
CLN8-202ENST00000517514 CCDC196A0A1B0GTZ2 297 aa11.46□□□□□ -0.57
CLN8-202ENST00000517514 PTPDC1A2A3K4 754 aa11.46□□□□□ -0.57
CLN8-202ENST00000517514 K7ELQ4 463 aaPredicted RBP11.46□□□□□ -0.57
CLN8-202ENST00000517514 ICAM1P05362 532 aa11.46□□□□□ -0.57
CLN8-202ENST00000517514 FDX1P10109 184 aa11.46□□□□□ -0.57
CLN8-202ENST00000517514 FAM110CQ1W6H9 321 aa11.46□□□□□ -0.57
CLN8-202ENST00000517514 MUM1L1Q5H9M0 696 aa11.46□□□□□ -0.57
CLN8-202ENST00000517514 HOMER1Q86YM7 354 aa11.46□□□□□ -0.57
CLN8-202ENST00000517514 RIOX2Q8IUF8 465 aa11.46□□□□□ -0.57
CLN8-202ENST00000517514 CPXCR1Q8N123 301 aa11.46□□□□□ -0.57
CLN8-202ENST00000517514 MB21D1Q8N884 522 aa11.46□□□□□ -0.57
CLN8-202ENST00000517514 SMCR8Q8TEV9 937 aaPredicted RBP11.46□□□□□ -0.57
CLN8-202ENST00000517514 CLEC4DQ8WXI8 215 aa11.46□□□□□ -0.57
CLN8-202ENST00000517514 SLC26A6Q9BXS9 759 aa11.46□□□□□ -0.57
CLN8-202ENST00000517514 RNF26Q9BY78 433 aaPredicted RBP11.46□□□□□ -0.57
CLN8-202ENST00000517514 SPATC1LQ9H0A9 340 aa11.46□□□□□ -0.57
CLN8-202ENST00000517514 SAGE1Q9NXZ1 904 aa11.46□□□□□ -0.57
CLN8-202ENST00000517514 TSKSQ9UJT2 592 aa11.46□□□□□ -0.57
CLN8-202ENST00000517514 PLXNA1Q9UIW2 1896 aa11.45□□□□□ -0.58
CLN8-202ENST00000517514 STK36Q9NRP7 1315 aa11.45□□□□□ -0.58
CLN8-202ENST00000517514 ZNF236Q9UL36 1845 aa11.45□□□□□ -0.58
CLN8-202ENST00000517514 ZBED4O75132 1171 aa11.45□□□□□ -0.58
CLN8-202ENST00000517514 STAT3P40763 770 aa11.45□□□□□ -0.58
CLN8-202ENST00000517514 OAZ1P54368 228 aa11.45□□□□□ -0.58
CLN8-202ENST00000517514 MAP2K1Q02750 393 aaPredicted RBP11.45□□□□□ -0.58
CLN8-202ENST00000517514 PFKFB3Q16875 520 aaPredicted RBP11.45□□□□□ -0.58
CLN8-202ENST00000517514 WWC2Q6AWC2 1192 aa11.45□□□□□ -0.58
CLN8-202ENST00000517514 SNRNP48Q6IEG0 339 aaKnown RBP11.45□□□□□ -0.58
CLN8-202ENST00000517514 GTF3C2Q8WUA4 911 aaPredicted RBP11.45□□□□□ -0.58
CLN8-202ENST00000517514 TBC1D5Q92609 795 aa11.45□□□□□ -0.58
CLN8-202ENST00000517514 GPKOWQ92917 476 aaPredicted RBP eCLIP11.45□□□□□ -0.58
CLN8-202ENST00000517514 COA7Q96BR5 231 aa11.45□□□□□ -0.58
CLN8-202ENST00000517514 RRP36Q96EU6 259 aaKnown RBP11.45□□□□□ -0.58
CLN8-202ENST00000517514 ARHGAP39Q9C0H5 1083 aa11.45□□□□□ -0.58
CLN8-202ENST00000517514 GJB4Q9NTQ9 266 aa11.45□□□□□ -0.58
CLN8-202ENST00000517514 RBM19Q9Y4C8 960 aaKnown RBP11.45□□□□□ -0.58
CLN8-202ENST00000517514 CASP8AP2Q9UKL3 1982 aa11.45□□□□□ -0.58
CLN8-202ENST00000517514 GPR25O00155 361 aa11.44□□□□□ -0.58
CLN8-202ENST00000517514 STXBP3O00186 592 aa11.44□□□□□ -0.58
CLN8-202ENST00000517514 DHX16O60231 1041 aaKnown RBP11.44□□□□□ -0.58
CLN8-202ENST00000517514 SCG2P13521 617 aa11.44□□□□□ -0.58
CLN8-202ENST00000517514 SSRP1Q08945 709 aaKnown RBP11.44□□□□□ -0.58
CLN8-202ENST00000517514 NPY5RQ15761 445 aa11.44□□□□□ -0.58
CLN8-202ENST00000517514 USH1GQ495M9 461 aa11.44□□□□□ -0.58
CLN8-202ENST00000517514 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.44□□□□□ -0.58
CLN8-202ENST00000517514 FBXO11Q86XK2 927 aa11.44□□□□□ -0.58
CLN8-202ENST00000517514 GPRC5AQ8NFJ5 357 aa11.44□□□□□ -0.58
CLN8-202ENST00000517514 DDX11Q96FC9 970 aa11.44□□□□□ -0.58
CLN8-202ENST00000517514 LLPHQ9BRT6 129 aaKnown RBP11.44□□□□□ -0.58
CLN8-202ENST00000517514 TEX13BQ9BXU2 312 aa11.44□□□□□ -0.58
CLN8-202ENST00000517514 EFCC1Q9HA90 598 aa11.44□□□□□ -0.58
CLN8-202ENST00000517514 ORC3Q9UBD5 711 aaPredicted RBP11.44□□□□□ -0.58
CLN8-202ENST00000517514 CCPG1Q9ULG6 757 aa11.44□□□□□ -0.58
CLN8-202ENST00000517514 NFIBO00712 420 aa11.43□□□□□ -0.58
CLN8-202ENST00000517514 CPLX1O14810 134 aa11.43□□□□□ -0.58
CLN8-202ENST00000517514 FOXN1O15353 648 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms