RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 SCG2P13521 617 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 ANTXR2P58335 489 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 FOXO4P98177 505 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 RAPGEF1Q13905 1077 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 NEDD9Q14511 834 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 SNCBQ16143 134 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 TCERG1LQ5VWI1 586 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 KLHL7Q8IXQ5 586 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 BLIDQ8IZY5 108 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 KIFC2Q96AC6 838 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 STIM2Q9P246 746 aa7.39□□□□□ -1.23
CPNE3-203ENST00000517490 G3V3G9 751 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 N4BP1O75113 896 aaKnown RBP7.38□□□□□ -1.23
CPNE3-203ENST00000517490 ATXN8OSP0DMR3 200 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 DCAF8Q5TAQ9 597 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 KCTD16Q68DU8 428 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 PI16Q6UXB8 463 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 STRBPQ96SI9 672 aaKnown RBP7.38□□□□□ -1.23
CPNE3-203ENST00000517490 ANKZF1Q9H8Y5 726 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 STX8Q9UNK0 236 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 TRAF5O00463 557 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 PSMD14O00487 310 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 CTNNA1P35221 906 aaKnown RBP7.38□□□□□ -1.23
CPNE3-203ENST00000517490 GUCY2DQ02846 1103 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 ASIC2Q16515 512 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 LRRC31Q6UY01 552 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 KRT25Q7Z3Z0 450 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 ORAI2Q96SN7 254 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 NAP1L3Q99457 506 aaPredicted RBP7.38□□□□□ -1.23
CPNE3-203ENST00000517490 FAM53CQ9NYF3 392 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 LRWD1Q9UFC0 647 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 UTP11Q9Y3A2 253 aaKnown RBP7.38□□□□□ -1.23
CPNE3-203ENST00000517490 SRGAP2O75044 1071 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 BAG3O95817 575 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 IL2RBP14784 551 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 PHKA1P46020 1223 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 FXR1P51114 621 aaKnown RBP eCLIP7.38□□□□□ -1.23
CPNE3-203ENST00000517490 LETM2Q2VYF4 491 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 GKAP1Q5VSY0 366 aaPredicted RBP7.38□□□□□ -1.23
CPNE3-203ENST00000517490 ARL6IP4Q66PJ3 421 aaKnown RBP7.38□□□□□ -1.23
CPNE3-203ENST00000517490 ARMC9Q7Z3E5 817 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 FMNL3Q8IVF7 1028 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 WHAMMQ8TF30 809 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 P2RX5Q93086 422 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 MTRF1LQ9UGC7 380 aaKnown RBP7.38□□□□□ -1.23
CPNE3-203ENST00000517490 NEDD4P46934 1319 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 CHUKO15111 745 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 CEP104O60308 925 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 HEXIM1O94992 359 aaKnown RBP7.38□□□□□ -1.23
CPNE3-203ENST00000517490 ZNF18P17022 549 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 NR1D1P20393 614 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 IFT88Q13099 833 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 SEPT7Q16181 437 aaKnown RBP7.38□□□□□ -1.23
CPNE3-203ENST00000517490 GALNT17Q6IS24 598 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 RRP36Q96EU6 259 aaKnown RBP7.38□□□□□ -1.23
CPNE3-203ENST00000517490 MAP3K14Q99558 947 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 TACO1Q9BSH4 297 aaKnown RBP7.38□□□□□ -1.23
CPNE3-203ENST00000517490 VEZTQ9HBM0 779 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 PLCB1Q9NQ66 1216 aa7.38□□□□□ -1.23
CPNE3-203ENST00000517490 LAD1O00515 517 aa7.37□□□□□ -1.23
CPNE3-203ENST00000517490 BUB1BO60566 1050 aaPredicted RBP7.37□□□□□ -1.23
CPNE3-203ENST00000517490 ATP1A1P05023 1023 aaKnown RBP7.37□□□□□ -1.23
CPNE3-203ENST00000517490 LDHCP07864 332 aa7.37□□□□□ -1.23
CPNE3-203ENST00000517490 RNASE9P60153 205 aaKnown RBP7.37□□□□□ -1.23
CPNE3-203ENST00000517490 SEMA3FQ13275 785 aa7.37□□□□□ -1.23
CPNE3-203ENST00000517490 CCNI2Q6ZMN8 369 aaPredicted RBP7.37□□□□□ -1.23
CPNE3-203ENST00000517490 DZIP3Q86Y13 1208 aaKnown RBP7.37□□□□□ -1.23
CPNE3-203ENST00000517490 NOA1Q8NC60 698 aaKnown RBP7.37□□□□□ -1.23
CPNE3-203ENST00000517490 IFT74Q96LB3 600 aa7.37□□□□□ -1.23
CPNE3-203ENST00000517490 SUGCTQ9HAC7 445 aa7.37□□□□□ -1.23
CPNE3-203ENST00000517490 VAT1LQ9HCJ6 419 aa7.37□□□□□ -1.23
CPNE3-203ENST00000517490 PIH1D3Q9NQM4 214 aaKnown RBP7.37□□□□□ -1.23
CPNE3-203ENST00000517490 HDAC6Q9UBN7 1215 aa7.37□□□□□ -1.23
CPNE3-203ENST00000517490 DENND2AQ9ULE3 1009 aa7.37□□□□□ -1.23
CPNE3-203ENST00000517490 PCDHA13Q9Y5I0 950 aa7.37□□□□□ -1.23
CPNE3-203ENST00000517490 ERBB3P21860 1342 aa7.37□□□□□ -1.23
CPNE3-203ENST00000517490 TTC26A0AVF1 554 aa7.37□□□□□ -1.23
CPNE3-203ENST00000517490 ACTN4O43707 911 aaKnown RBP7.37□□□□□ -1.23
CPNE3-203ENST00000517490 GYPCP04921 128 aa7.37□□□□□ -1.23
CPNE3-203ENST00000517490 CCNE1P24864 410 aa7.37□□□□□ -1.23
CPNE3-203ENST00000517490 MCAMP43121 646 aa7.37□□□□□ -1.23
CPNE3-203ENST00000517490 KLHL30Q0D2K2 578 aa7.37□□□□□ -1.23
CPNE3-203ENST00000517490 PDIA6Q15084 440 aa7.37□□□□□ -1.23
CPNE3-203ENST00000517490 NONOQ15233 471 aaKnown RBP eCLIP7.37□□□□□ -1.23
CPNE3-203ENST00000517490 KRT71Q3SY84 523 aa7.37□□□□□ -1.23
CPNE3-203ENST00000517490 BANK1Q8NDB2 785 aa7.37□□□□□ -1.23
CPNE3-203ENST00000517490 STAG1Q8WVM7 1258 aa7.37□□□□□ -1.23
CPNE3-203ENST00000517490 MMS19Q96T76 1030 aa7.37□□□□□ -1.23
CPNE3-203ENST00000517490 HINFPQ9BQA5 517 aa7.37□□□□□ -1.23
CPNE3-203ENST00000517490 JPH2Q9BR39 696 aaPredicted RBP7.37□□□□□ -1.23
CPNE3-203ENST00000517490 UBA5Q9GZZ9 404 aa7.37□□□□□ -1.23
CPNE3-203ENST00000517490 EPB41L5Q9HCM4 733 aa7.37□□□□□ -1.23
CPNE3-203ENST00000517490 OVOS2A0A0G2JMS6 1433 aa7.37□□□□□ -1.23
CPNE3-203ENST00000517490 RPS6KA5O75582 802 aa7.37□□□□□ -1.23
CPNE3-203ENST00000517490 PDCLQ13371 301 aa7.37□□□□□ -1.23
CPNE3-203ENST00000517490 TBC1D5Q92609 795 aa7.37□□□□□ -1.23
CPNE3-203ENST00000517490 GEMIN8Q9NWZ8 242 aaKnown RBP7.37□□□□□ -1.23
CPNE3-203ENST00000517490 CAPN11Q9UMQ6 739 aa7.37□□□□□ -1.23
CPNE3-203ENST00000517490 HEG1Q9ULI3 1381 aa7.37□□□□□ -1.23
CPNE3-203ENST00000517490 A0A0G2JLW4 131 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms