RNA–Protein interactions for RNA: ENST00000516600.1

SCARNA21.2-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.2-201ENST00000516600 GJA9P57773 515 aa7.11□□□□□ -1.27
SCARNA21.2-201ENST00000516600 DEFB103AP81534 67 aa7.11□□□□□ -1.27
SCARNA21.2-201ENST00000516600 EPC2Q52LR7 807 aa7.11□□□□□ -1.27
SCARNA21.2-201ENST00000516600 FAM117BQ6P1L5 589 aa7.11□□□□□ -1.27
SCARNA21.2-201ENST00000516600 CCDC105Q8IYK2 499 aa7.11□□□□□ -1.27
SCARNA21.2-201ENST00000516600 CRACR2BQ8N4Y2 399 aaPredicted RBP7.11□□□□□ -1.27
SCARNA21.2-201ENST00000516600 GPR161Q8N6U8 529 aaKnown RBP7.11□□□□□ -1.27
SCARNA21.2-201ENST00000516600 SAMD11Q96NU1 681 aa7.11□□□□□ -1.27
SCARNA21.2-201ENST00000516600 PHF7Q9BWX1 381 aaPredicted RBP7.11□□□□□ -1.27
SCARNA21.2-201ENST00000516600 UPF3AQ9H1J1 476 aaKnown RBP7.11□□□□□ -1.27
SCARNA21.2-201ENST00000516600 INCENPQ9NQS7 918 aa7.11□□□□□ -1.27
SCARNA21.2-201ENST00000516600 ZBTB21Q9ULJ3 1066 aa7.11□□□□□ -1.27
SCARNA21.2-201ENST00000516600 ZMIZ1Q9ULJ6 1067 aa7.11□□□□□ -1.27
SCARNA21.2-201ENST00000516600 IGF2RP11717 2491 aa7.1□□□□□ -1.27
SCARNA21.2-201ENST00000516600 MYH2Q9UKX2 1941 aa7.1□□□□□ -1.27
SCARNA21.2-201ENST00000516600 H3BNC9 293 aa7.1□□□□□ -1.27
SCARNA21.2-201ENST00000516600 GDF11O95390 407 aa7.1□□□□□ -1.27
SCARNA21.2-201ENST00000516600 EYA4O95677 639 aa7.1□□□□□ -1.27
SCARNA21.2-201ENST00000516600 HSPA5P11021 654 aaKnown RBP7.1□□□□□ -1.27
SCARNA21.2-201ENST00000516600 KCNA4P22459 653 aa7.1□□□□□ -1.27
SCARNA21.2-201ENST00000516600 BTDP43251 543 aa7.1□□□□□ -1.27
SCARNA21.2-201ENST00000516600 USP14P54578 494 aa7.1□□□□□ -1.27
SCARNA21.2-201ENST00000516600 FOXO4P98177 505 aa7.1□□□□□ -1.27
SCARNA21.2-201ENST00000516600 BEX3Q00994 111 aa7.1□□□□□ -1.27
SCARNA21.2-201ENST00000516600 HYAL1Q12794 435 aa7.1□□□□□ -1.27
SCARNA21.2-201ENST00000516600 MTMR3Q13615 1198 aa7.1□□□□□ -1.27
SCARNA21.2-201ENST00000516600 LMBR1LQ6UX01 489 aa7.1□□□□□ -1.27
SCARNA21.2-201ENST00000516600 PRR23BQ6ZRT6 265 aa7.1□□□□□ -1.27
SCARNA21.2-201ENST00000516600 SLF2Q8IX21 1173 aa7.1□□□□□ -1.27
SCARNA21.2-201ENST00000516600 UBALD2Q8IYN6 164 aa7.1□□□□□ -1.27
SCARNA21.2-201ENST00000516600 CRIPAKQ8N1N5 446 aa7.1□□□□□ -1.27
SCARNA21.2-201ENST00000516600 RETREG2Q8NC44 543 aa7.1□□□□□ -1.27
SCARNA21.2-201ENST00000516600 MMP19Q99542 508 aa7.1□□□□□ -1.27
SCARNA21.2-201ENST00000516600 TRIM34Q9BYJ4 488 aa7.1□□□□□ -1.27
SCARNA21.2-201ENST00000516600 IGFLR1Q9H665 355 aa7.1□□□□□ -1.27
SCARNA21.2-201ENST00000516600 GINM1Q9NU53 330 aa7.1□□□□□ -1.27
SCARNA21.2-201ENST00000516600 NCDNQ9UBB6 729 aa7.1□□□□□ -1.27
SCARNA21.2-201ENST00000516600 DIS3Q9Y2L1 958 aaKnown RBP7.1□□□□□ -1.27
SCARNA21.2-201ENST00000516600 TET1Q8NFU7 2136 aa7.09□□□□□ -1.27
SCARNA21.2-201ENST00000516600 GRIN2DO15399 1336 aa7.09□□□□□ -1.27
SCARNA21.2-201ENST00000516600 NPM3O75607 178 aaKnown RBP7.09□□□□□ -1.27
SCARNA21.2-201ENST00000516600 IQCF3P0C7M6 154 aa7.09□□□□□ -1.27
SCARNA21.2-201ENST00000516600 RRP1P56182 461 aaKnown RBP7.09□□□□□ -1.27
SCARNA21.2-201ENST00000516600 JAG1P78504 1218 aa7.09□□□□□ -1.27
SCARNA21.2-201ENST00000516600 SHROOM1Q2M3G4 852 aaPredicted RBP7.09□□□□□ -1.27
SCARNA21.2-201ENST00000516600 ZNF792Q3KQV3 632 aa7.09□□□□□ -1.27
SCARNA21.2-201ENST00000516600 METTL24Q5JXM2 366 aa7.09□□□□□ -1.27
SCARNA21.2-201ENST00000516600 DZIP1Q86YF9 867 aaKnown RBP7.09□□□□□ -1.27
SCARNA21.2-201ENST00000516600 MB21D1Q8N884 522 aa7.09□□□□□ -1.27
SCARNA21.2-201ENST00000516600 DTWD2Q8NBA8 298 aa7.09□□□□□ -1.27
SCARNA21.2-201ENST00000516600 SMRP1Q8NCR6 262 aa7.09□□□□□ -1.27
SCARNA21.2-201ENST00000516600 KREMEN2Q8NCW0 462 aa7.09□□□□□ -1.27
SCARNA21.2-201ENST00000516600 FLCNQ8NFG4 579 aa7.09□□□□□ -1.27
SCARNA21.2-201ENST00000516600 PUS3Q9BZE2 481 aaKnown RBP7.09□□□□□ -1.27
SCARNA21.2-201ENST00000516600 ALDH8A1Q9H2A2 487 aaPredicted RBP7.09□□□□□ -1.27
SCARNA21.2-201ENST00000516600 RPAP3Q9H6T3 665 aaPredicted RBP7.09□□□□□ -1.27
SCARNA21.2-201ENST00000516600 TRMT13Q9NUP7 481 aaKnown RBP7.09□□□□□ -1.27
SCARNA21.2-201ENST00000516600 HOXC10Q9NYD6 342 aa7.09□□□□□ -1.27
SCARNA21.2-201ENST00000516600 USP15Q9Y4E8 981 aaPredicted RBP7.09□□□□□ -1.27
SCARNA21.2-201ENST00000516600 INSL6Q9Y581 213 aa7.09□□□□□ -1.27
SCARNA21.2-201ENST00000516600 ZNFX1Q9P2E3 1918 aaKnown RBP7.09□□□□□ -1.27
SCARNA21.2-201ENST00000516600 TANC1Q9C0D5 1861 aa7.09□□□□□ -1.28
SCARNA21.2-201ENST00000516600 PITPNM1O00562 1244 aa7.08□□□□□ -1.28
SCARNA21.2-201ENST00000516600 LINC01565O15544 149 aa7.08□□□□□ -1.28
SCARNA21.2-201ENST00000516600 ADCY6O43306 1168 aa7.08□□□□□ -1.28
SCARNA21.2-201ENST00000516600 ZEB2O60315 1214 aa7.08□□□□□ -1.28
SCARNA21.2-201ENST00000516600 IFIT1P09914 478 aaKnown RBP7.08□□□□□ -1.28
SCARNA21.2-201ENST00000516600 PSMC6P62333 389 aa7.08□□□□□ -1.28
SCARNA21.2-201ENST00000516600 ZNF200P98182 395 aaPredicted RBP7.08□□□□□ -1.28
SCARNA21.2-201ENST00000516600 RING1Q06587 406 aa7.08□□□□□ -1.28
SCARNA21.2-201ENST00000516600 COG2Q14746 738 aa7.08□□□□□ -1.28
SCARNA21.2-201ENST00000516600 NOL8Q76FK4 1167 aaKnown RBP7.08□□□□□ -1.28
SCARNA21.2-201ENST00000516600 MSL3Q8N5Y2 521 aaKnown RBP7.08□□□□□ -1.28
SCARNA21.2-201ENST00000516600 SECISBP2LQ93073 1101 aaKnown RBP7.08□□□□□ -1.28
SCARNA21.2-201ENST00000516600 MSLNLQ96KJ4 702 aa7.08□□□□□ -1.28
SCARNA21.2-201ENST00000516600 ANKFY1Q9P2R3 1169 aa7.08□□□□□ -1.28
SCARNA21.2-201ENST00000516600 PI4KBQ9UBF8 816 aa7.08□□□□□ -1.28
SCARNA21.2-201ENST00000516600 SORCS3Q9UPU3 1222 aa7.08□□□□□ -1.28
SCARNA21.2-201ENST00000516600 MYO18BQ8IUG5 2567 aa7.08□□□□□ -1.28
SCARNA21.2-201ENST00000516600 CNOT1A5YKK6 2376 aaKnown RBP7.08□□□□□ -1.28
SCARNA21.2-201ENST00000516600 SALL1Q9NSC2 1324 aa7.07□□□□□ -1.28
SCARNA21.2-201ENST00000516600 TAF4O00268 1085 aa7.07□□□□□ -1.28
SCARNA21.2-201ENST00000516600 ELL2O00472 640 aaPredicted RBP7.07□□□□□ -1.28
SCARNA21.2-201ENST00000516600 CTAGE5O15320 804 aa7.07□□□□□ -1.28
SCARNA21.2-201ENST00000516600 BRD1O95696 1058 aa7.07□□□□□ -1.28
SCARNA21.2-201ENST00000516600 AOC1P19801 751 aa7.07□□□□□ -1.28
SCARNA21.2-201ENST00000516600 PPP2R1AP30153 589 aa7.07□□□□□ -1.28
SCARNA21.2-201ENST00000516600 GTF2F1P35269 517 aaKnown RBP eCLIP7.07□□□□□ -1.28
SCARNA21.2-201ENST00000516600 SHC2P98077 582 aa7.07□□□□□ -1.28
SCARNA21.2-201ENST00000516600 COASYQ13057 564 aa7.07□□□□□ -1.28
SCARNA21.2-201ENST00000516600 ACVR2BQ13705 512 aa7.07□□□□□ -1.28
SCARNA21.2-201ENST00000516600 CCDC144BQ3MJ40 725 aa7.07□□□□□ -1.28
SCARNA21.2-201ENST00000516600 FBXO11Q86XK2 927 aa7.07□□□□□ -1.28
SCARNA21.2-201ENST00000516600 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.07□□□□□ -1.28
SCARNA21.2-201ENST00000516600 PPP2R3CQ969Q6 453 aa7.07□□□□□ -1.28
SCARNA21.2-201ENST00000516600 TANGO6Q9C0B7 1094 aa7.07□□□□□ -1.28
SCARNA21.2-201ENST00000516600 KIAA1683Q9H0B3 1180 aa7.07□□□□□ -1.28
SCARNA21.2-201ENST00000516600 USP18Q9UMW8 372 aa7.07□□□□□ -1.28
SCARNA21.2-201ENST00000516600 MROH7-TTC4A0A0A0MT08 1334 aa7.06□□□□□ -1.28
SCARNA21.2-201ENST00000516600 DSPP15924 2871 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms