RNA–Protein interactions for RNA: ENST00000516257.1

RNU2-53P-201, Transcript of RNA, U2 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU2-53P, Length 147 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-53P-201ENST00000516257 JMJD8Q96S16 334 aa4.3□□□□□ -1.72
RNU2-53P-201ENST00000516257 RBM15Q96T37 977 aaKnown RBP eCLIP4.3□□□□□ -1.72
RNU2-53P-201ENST00000516257 AK5Q9Y6K8 562 aa4.3□□□□□ -1.72
RNU2-53P-201ENST00000516257 PMF1-BGLAPU3KQ54 211 aa4.3□□□□□ -1.72
RNU2-53P-201ENST00000516257 MEIS1O00470 390 aa4.29□□□□□ -1.72
RNU2-53P-201ENST00000516257 SIGLEC6O43699 453 aa4.29□□□□□ -1.72
RNU2-53P-201ENST00000516257 ATF2P15336 505 aa4.29□□□□□ -1.72
RNU2-53P-201ENST00000516257 ZNF20P17024 532 aa4.29□□□□□ -1.72
RNU2-53P-201ENST00000516257 FOXO4P98177 505 aa4.29□□□□□ -1.72
RNU2-53P-201ENST00000516257 NBPF12Q5TAG4 269 aaPredicted RBP4.29□□□□□ -1.72
RNU2-53P-201ENST00000516257 CCDC84Q86UT8 332 aaPredicted RBP4.29□□□□□ -1.72
RNU2-53P-201ENST00000516257 GATAD2BQ8WXI9 593 aa4.29□□□□□ -1.72
RNU2-53P-201ENST00000516257 CDADC1Q9BWV3 514 aa4.29□□□□□ -1.72
RNU2-53P-201ENST00000516257 LNPKQ9C0E8 428 aa4.29□□□□□ -1.72
RNU2-53P-201ENST00000516257 A0A1W2PQ45 241 aaPredicted RBP4.28□□□□□ -1.72
RNU2-53P-201ENST00000516257 A0A1W2PQY0 241 aa4.28□□□□□ -1.72
RNU2-53P-201ENST00000516257 SH3D21A4FU49 640 aa4.28□□□□□ -1.72
RNU2-53P-201ENST00000516257 C1QTNF3-AMACRE9PGA6 284 aa4.28□□□□□ -1.72
RNU2-53P-201ENST00000516257 NOBOXO60393 691 aa4.28□□□□□ -1.72
RNU2-53P-201ENST00000516257 ZNF205O95201 554 aa4.28□□□□□ -1.72
RNU2-53P-201ENST00000516257 PF4P02776 101 aa4.28□□□□□ -1.72
RNU2-53P-201ENST00000516257 POLR2BP30876 1174 aaKnown RBP4.28□□□□□ -1.72
RNU2-53P-201ENST00000516257 MC3RP41968 323 aa4.28□□□□□ -1.72
RNU2-53P-201ENST00000516257 CTSKP43235 329 aa4.28□□□□□ -1.72
RNU2-53P-201ENST00000516257 HMGA2P52926 109 aa4.28□□□□□ -1.72
RNU2-53P-201ENST00000516257 MFAP1P55081 439 aaKnown RBP4.28□□□□□ -1.72
RNU2-53P-201ENST00000516257 MVKQ03426 396 aa4.28□□□□□ -1.72
RNU2-53P-201ENST00000516257 CAMK2GQ13555 558 aaPredicted RBP4.28□□□□□ -1.72
RNU2-53P-201ENST00000516257 NR1I3Q14994 352 aa4.28□□□□□ -1.72
RNU2-53P-201ENST00000516257 ARSHQ5FYA8 562 aa4.28□□□□□ -1.72
RNU2-53P-201ENST00000516257 CPZQ66K79 652 aa4.28□□□□□ -1.72
RNU2-53P-201ENST00000516257 TMEM52Q8NDY8 209 aa4.28□□□□□ -1.72
RNU2-53P-201ENST00000516257 RGS22Q8NE09 1264 aa4.28□□□□□ -1.72
RNU2-53P-201ENST00000516257 EAF1Q96JC9 268 aaPredicted RBP4.28□□□□□ -1.72
RNU2-53P-201ENST00000516257 ZNF512BQ96KM6 892 aaPredicted RBP4.28□□□□□ -1.72
RNU2-53P-201ENST00000516257 C8orf49Q96NF6 230 aa4.28□□□□□ -1.72
RNU2-53P-201ENST00000516257 SLPIP03973 132 aa4.27□□□□□ -1.73
RNU2-53P-201ENST00000516257 DBHP09172 617 aa4.27□□□□□ -1.73
RNU2-53P-201ENST00000516257 RLBP1P12271 317 aa4.27□□□□□ -1.73
RNU2-53P-201ENST00000516257 C6P13671 934 aa4.27□□□□□ -1.73
RNU2-53P-201ENST00000516257 LMNB2Q03252 620 aa4.27□□□□□ -1.73
RNU2-53P-201ENST00000516257 TARBP2Q15633 366 aaKnown RBP4.27□□□□□ -1.73
RNU2-53P-201ENST00000516257 CARFQ8N187 725 aa4.27□□□□□ -1.73
RNU2-53P-201ENST00000516257 Q8N1X5 172 aa4.27□□□□□ -1.73
RNU2-53P-201ENST00000516257 MENTQ9BUN1 341 aa4.27□□□□□ -1.73
RNU2-53P-201ENST00000516257 C1QTNF3Q9BXJ4 246 aa4.27□□□□□ -1.73
RNU2-53P-201ENST00000516257 CHST7Q9NS84 486 aa4.27□□□□□ -1.73
RNU2-53P-201ENST00000516257 AP5S1Q9NUS5 200 aa4.27□□□□□ -1.73
RNU2-53P-201ENST00000516257 IVNS1ABPQ9Y6Y0 642 aa4.27□□□□□ -1.73
RNU2-53P-201ENST00000516257 PRPF40AO75400 957 aaKnown RBP4.26□□□□□ -1.73
RNU2-53P-201ENST00000516257 RAG1P15918 1043 aa4.26□□□□□ -1.73
RNU2-53P-201ENST00000516257 DIEXFQ68CQ4 756 aaKnown RBP4.26□□□□□ -1.73
RNU2-53P-201ENST00000516257 CRTC3Q6UUV7 619 aa4.26□□□□□ -1.73
RNU2-53P-201ENST00000516257 FBXO27Q8NI29 283 aa4.26□□□□□ -1.73
RNU2-53P-201ENST00000516257 LOXL4Q96JB6 756 aa4.26□□□□□ -1.73
RNU2-53P-201ENST00000516257 RHOVQ96L33 236 aa4.26□□□□□ -1.73
RNU2-53P-201ENST00000516257 NOC4LQ9BVI4 516 aaKnown RBP4.26□□□□□ -1.73
RNU2-53P-201ENST00000516257 SRGAP3O43295 1099 aa4.25□□□□□ -1.73
RNU2-53P-201ENST00000516257 BMP8BP34820 402 aa4.25□□□□□ -1.73
RNU2-53P-201ENST00000516257 GJA9P57773 515 aa4.25□□□□□ -1.73
RNU2-53P-201ENST00000516257 SND1Q7KZF4 910 aaKnown RBP eCLIP4.25□□□□□ -1.73
RNU2-53P-201ENST00000516257 REC114Q7Z4M0 266 aa4.25□□□□□ -1.73
RNU2-53P-201ENST00000516257 DUSP9Q99956 384 aaKnown RBP4.25□□□□□ -1.73
RNU2-53P-201ENST00000516257 MRIQ9BWK5 157 aa4.25□□□□□ -1.73
RNU2-53P-201ENST00000516257 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.25□□□□□ -1.73
RNU2-53P-201ENST00000516257 GFOD1Q9NXC2 390 aa4.25□□□□□ -1.73
RNU2-53P-201ENST00000516257 FAN1Q9Y2M0 1017 aa4.25□□□□□ -1.73
RNU2-53P-201ENST00000516257 CYBBP04839 570 aa4.24□□□□□ -1.73
RNU2-53P-201ENST00000516257 VAV1P15498 845 aa4.24□□□□□ -1.73
RNU2-53P-201ENST00000516257 ENDOUP21128 410 aaKnown RBP4.24□□□□□ -1.73
RNU2-53P-201ENST00000516257 TACR2P21452 398 aa4.24□□□□□ -1.73
RNU2-53P-201ENST00000516257 FAM160A1Q05DH4 1040 aa4.24□□□□□ -1.73
RNU2-53P-201ENST00000516257 RTP2Q5QGT7 225 aa4.24□□□□□ -1.73
RNU2-53P-201ENST00000516257 PAQR3Q6TCH7 311 aa4.24□□□□□ -1.73
RNU2-53P-201ENST00000516257 SPRED1Q7Z699 444 aa4.24□□□□□ -1.73
RNU2-53P-201ENST00000516257 ZFPM1Q8IX07 1006 aa4.24□□□□□ -1.73
RNU2-53P-201ENST00000516257 TTC9BQ8N6N2 239 aa4.24□□□□□ -1.73
RNU2-53P-201ENST00000516257 SAMD11Q96NU1 681 aa4.24□□□□□ -1.73
RNU2-53P-201ENST00000516257 A0A1W2PQ27 194 aa4.23□□□□□ -1.73
RNU2-53P-201ENST00000516257 A0A1W2PQ64 194 aa4.23□□□□□ -1.73
RNU2-53P-201ENST00000516257 A0A1W2PQC6 194 aa4.23□□□□□ -1.73
RNU2-53P-201ENST00000516257 A0A1W2PQD8 194 aa4.23□□□□□ -1.73
RNU2-53P-201ENST00000516257 TLR3O15455 904 aaKnown RBP4.23□□□□□ -1.73
RNU2-53P-201ENST00000516257 ASGR2P07307 311 aa4.23□□□□□ -1.73
RNU2-53P-201ENST00000516257 GDF5P43026 501 aa4.23□□□□□ -1.73
RNU2-53P-201ENST00000516257 ST13P50502 369 aaKnown RBP4.23□□□□□ -1.73
RNU2-53P-201ENST00000516257 PRR5P85299 388 aa4.23□□□□□ -1.73
RNU2-53P-201ENST00000516257 MPP2Q14168 576 aa4.23□□□□□ -1.73
RNU2-53P-201ENST00000516257 TAF1CQ15572 869 aaPredicted RBP4.23□□□□□ -1.73
RNU2-53P-201ENST00000516257 CCDC27Q2M243 656 aa4.23□□□□□ -1.73
RNU2-53P-201ENST00000516257 OVOS1Q6IE37 1185 aa4.23□□□□□ -1.73
RNU2-53P-201ENST00000516257 ZNF761Q86XN6 746 aaPredicted RBP4.23□□□□□ -1.73
RNU2-53P-201ENST00000516257 NOX5Q96PH1 765 aa4.23□□□□□ -1.73
RNU2-53P-201ENST00000516257 RNF38Q9H0F5 515 aa4.23□□□□□ -1.73
RNU2-53P-201ENST00000516257 BCAS3Q9H6U6 928 aa4.23□□□□□ -1.73
RNU2-53P-201ENST00000516257 F8W031 263 aaPredicted RBP4.22□□□□□ -1.73
RNU2-53P-201ENST00000516257 PLATP00750 562 aa4.22□□□□□ -1.73
RNU2-53P-201ENST00000516257 CTSHP09668 335 aa4.22□□□□□ -1.73
RNU2-53P-201ENST00000516257 NCAM1P13591 858 aa4.22□□□□□ -1.73
RNU2-53P-201ENST00000516257 TACR1P25103 407 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms