RNA–Protein interactions for RNA: ENST00000515881.5

DDR1-280, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 956 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-280ENST00000515881 ACAD9Q9H845 621 aa23.05■■□□□ 1.28
DDR1-280ENST00000515881 NEDD4P46934 1319 aa23.05■■□□□ 1.28
DDR1-280ENST00000515881 MYCNP04198 464 aaPredicted RBP23.04■■□□□ 1.28
DDR1-280ENST00000515881 RARBP10826 455 aa23.04■■□□□ 1.28
DDR1-280ENST00000515881 AKR1A1P14550 325 aa23.04■■□□□ 1.28
DDR1-280ENST00000515881 GSPT1P15170 499 aaKnown RBP23.04■■□□□ 1.28
DDR1-280ENST00000515881 SNAP25P60880 206 aa23.04■■□□□ 1.28
DDR1-280ENST00000515881 LRRC41Q15345 812 aa23.04■■□□□ 1.28
DDR1-280ENST00000515881 TKFCQ3LXA3 575 aa23.04■■□□□ 1.28
DDR1-280ENST00000515881 TTC14Q96N46 770 aa23.04■■□□□ 1.28
DDR1-280ENST00000515881 GDF15Q99988 308 aa23.04■■□□□ 1.28
DDR1-280ENST00000515881 XPNPEP3Q9NQH7 507 aa23.04■■□□□ 1.28
DDR1-280ENST00000515881 RNF146Q9NTX7 359 aa23.04■■□□□ 1.28
DDR1-280ENST00000515881 A0A1W2PPC1 479 aa23.03■■□□□ 1.28
DDR1-280ENST00000515881 SNAI1O95863 264 aaPredicted RBP23.03■■□□□ 1.28
DDR1-280ENST00000515881 ATN1P54259 1190 aaPredicted RBP23.03■■□□□ 1.28
DDR1-280ENST00000515881 CCDC174Q6PII3 467 aa23.03■■□□□ 1.28
DDR1-280ENST00000515881 FGD4Q96M96 766 aa23.03■■□□□ 1.28
DDR1-280ENST00000515881 ALAS1P13196 640 aa23.02■■□□□ 1.28
DDR1-280ENST00000515881 NT5C2P49902 561 aa23.02■■□□□ 1.28
DDR1-280ENST00000515881 TTBK2Q6IQ55 1244 aa23.02■■□□□ 1.28
DDR1-280ENST00000515881 BTNL9Q6UXG8 535 aa23.02■■□□□ 1.28
DDR1-280ENST00000515881 TRERF1Q96PN7 1200 aa23.02■■□□□ 1.28
DDR1-280ENST00000515881 A1CFQ9NQ94 594 aaKnown RBP23.02■■□□□ 1.28
DDR1-280ENST00000515881 FRMPD2Q68DX3 1309 aaPredicted RBP23.02■■□□□ 1.28
DDR1-280ENST00000515881 PDHBP11177 359 aa23.01■■□□□ 1.27
DDR1-280ENST00000515881 BMP8BP34820 402 aa23.01■■□□□ 1.27
DDR1-280ENST00000515881 SLC16A2P36021 539 aa23.01■■□□□ 1.27
DDR1-280ENST00000515881 ADCYAP1R1P41586 468 aa23.01■■□□□ 1.27
DDR1-280ENST00000515881 SYDE2Q5VT97 1194 aa23.01■■□□□ 1.27
DDR1-280ENST00000515881 LENG1Q96BZ8 264 aaPredicted RBP23.01■■□□□ 1.27
DDR1-280ENST00000515881 IL25Q9H293 177 aa23.01■■□□□ 1.27
DDR1-280ENST00000515881 RANBP17Q9H2T7 1088 aaKnown RBP23.01■■□□□ 1.27
DDR1-280ENST00000515881 GPCPD1Q9NPB8 672 aa23.01■■□□□ 1.27
DDR1-280ENST00000515881 CTNNA3Q9UI47 895 aa23.01■■□□□ 1.27
DDR1-280ENST00000515881 ZHX1Q9UKY1 873 aaPredicted RBP23.01■■□□□ 1.27
DDR1-280ENST00000515881 POTEB2H3BUK9 544 aa23■■□□□ 1.27
DDR1-280ENST00000515881 PGK1P00558 417 aa23■■□□□ 1.27
DDR1-280ENST00000515881 ICAM1P05362 532 aa23■■□□□ 1.27
DDR1-280ENST00000515881 MAGEA10P43363 369 aaPredicted RBP23■■□□□ 1.27
DDR1-280ENST00000515881 CNTN2Q02246 1040 aa23■■□□□ 1.27
DDR1-280ENST00000515881 IMMTQ16891 758 aaKnown RBP23■■□□□ 1.27
DDR1-280ENST00000515881 RNF180Q86T96 592 aa23■■□□□ 1.27
DDR1-280ENST00000515881 FAM133AQ8N9E0 248 aa23■■□□□ 1.27
DDR1-280ENST00000515881 ZKSCAN3Q9BRR0 538 aa23■■□□□ 1.27
DDR1-280ENST00000515881 CDKN2AIPQ9NXV6 580 aaPredicted RBP23■■□□□ 1.27
DDR1-280ENST00000515881 FAM184BQ9ULE4 1060 aa23■■□□□ 1.27
DDR1-280ENST00000515881 CCPG1Q9ULG6 757 aa23■■□□□ 1.27
DDR1-280ENST00000515881 TRIOBPQ9H2D6 2365 aa23■■□□□ 1.27
DDR1-280ENST00000515881 ZNFX1Q9P2E3 1918 aaKnown RBP23■■□□□ 1.27
DDR1-280ENST00000515881 PLXNA1Q9UIW2 1896 aa22.99■■□□□ 1.27
DDR1-280ENST00000515881 KDM4AO75164 1064 aa22.99■■□□□ 1.27
DDR1-280ENST00000515881 RTP1P59025 263 aa22.99■■□□□ 1.27
DDR1-280ENST00000515881 ZNF543Q08ER8 600 aa22.99■■□□□ 1.27
DDR1-280ENST00000515881 ACVR2BQ13705 512 aa22.99■■□□□ 1.27
DDR1-280ENST00000515881 MUM1L1Q5H9M0 696 aa22.99■■□□□ 1.27
DDR1-280ENST00000515881 SLC39A5Q6ZMH5 540 aa22.99■■□□□ 1.27
DDR1-280ENST00000515881 ARMCX2Q7L311 632 aa22.99■■□□□ 1.27
DDR1-280ENST00000515881 DGKHQ86XP1 1220 aa22.99■■□□□ 1.27
DDR1-280ENST00000515881 PHF24Q9UPV7 400 aa22.99■■□□□ 1.27
DDR1-280ENST00000515881 SNHG28P0DPA3 235 aa22.98■■□□□ 1.27
DDR1-280ENST00000515881 SNX17Q15036 470 aa22.98■■□□□ 1.27
DDR1-280ENST00000515881 CCDC178Q5BJE1 867 aa22.98■■□□□ 1.27
DDR1-280ENST00000515881 IQCA1Q86XH1 822 aa22.98■■□□□ 1.27
DDR1-280ENST00000515881 CCDC144CPQ8IYA2 1237 aa22.98■■□□□ 1.27
DDR1-280ENST00000515881 FERMT2Q96AC1 680 aa22.98■■□□□ 1.27
DDR1-280ENST00000515881 ABHD16BQ9H3Z7 469 aa22.98■■□□□ 1.27
DDR1-280ENST00000515881 RAD50Q92878 1312 aa22.98■■□□□ 1.27
DDR1-280ENST00000515881 SOWAHBA6NEL2 793 aa22.97■■□□□ 1.27
DDR1-280ENST00000515881 B4E1Z4 1266 aa22.97■■□□□ 1.27
DDR1-280ENST00000515881 ADAMTS4O75173 837 aa22.97■■□□□ 1.27
DDR1-280ENST00000515881 CYP39A1Q9NYL5 469 aa22.97■■□□□ 1.27
DDR1-280ENST00000515881 PCDH10Q9P2E7 1040 aa22.97■■□□□ 1.27
DDR1-280ENST00000515881 ATP11BQ9Y2G3 1177 aa22.97■■□□□ 1.27
DDR1-280ENST00000515881 SYNRGQ9UMZ2 1314 aa22.97■■□□□ 1.27
DDR1-280ENST00000515881 LAMA4Q16363 1823 aa22.96■■□□□ 1.27
DDR1-280ENST00000515881 ZSCAN10Q96SZ4 725 aaPredicted RBP22.96■■□□□ 1.27
DDR1-280ENST00000515881 DUSP11O75319 330 aaKnown RBP22.95■■□□□ 1.26
DDR1-280ENST00000515881 CHMLP26374 656 aa22.95■■□□□ 1.26
DDR1-280ENST00000515881 CCDC144BQ3MJ40 725 aa22.95■■□□□ 1.26
DDR1-280ENST00000515881 TRIM60Q495X7 471 aa22.95■■□□□ 1.26
DDR1-280ENST00000515881 GPATCH4Q5T3I0 446 aaKnown RBP22.95■■□□□ 1.26
DDR1-280ENST00000515881 C1orf53Q5VUE5 145 aa22.95■■□□□ 1.26
DDR1-280ENST00000515881 NSMFQ6X4W1 530 aa22.95■■□□□ 1.26
DDR1-280ENST00000515881 PNMA1Q8ND90 353 aa22.95■■□□□ 1.26
DDR1-280ENST00000515881 RUFY2Q8WXA3 655 aa22.95■■□□□ 1.26
DDR1-280ENST00000515881 ANKS1AQ92625 1134 aa22.95■■□□□ 1.26
DDR1-280ENST00000515881 KRT23Q9C075 422 aa22.95■■□□□ 1.26
DDR1-280ENST00000515881 UBE2OQ9C0C9 1292 aaKnown RBP22.95■■□□□ 1.26
DDR1-280ENST00000515881 KATNBL1Q9H079 304 aa22.95■■□□□ 1.26
DDR1-280ENST00000515881 CNNM2Q9H8M5 875 aa22.95■■□□□ 1.26
DDR1-280ENST00000515881 ZSWIM5Q9P217 1185 aa22.95■■□□□ 1.26
DDR1-280ENST00000515881 RANBP2P49792 3224 aaKnown RBP22.94■■□□□ 1.26
DDR1-280ENST00000515881 ASTN1O14525 1302 aa22.94■■□□□ 1.26
DDR1-280ENST00000515881 ASB14A6NK59 587 aa22.94■■□□□ 1.26
DDR1-280ENST00000515881 ADCY6O43306 1168 aa22.94■■□□□ 1.26
DDR1-280ENST00000515881 MDM2Q00987 491 aaPredicted RBP22.94■■□□□ 1.26
DDR1-280ENST00000515881 KLHDC9Q8NEP7 349 aa22.94■■□□□ 1.26
DDR1-280ENST00000515881 TSEN34Q9BSV6 310 aaKnown RBP22.94■■□□□ 1.26
DDR1-280ENST00000515881 KAT14Q9H8E8 782 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms